Lycophytes-1St-Semester
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Tansley Review Evolution of Development of Vascular Cambia and Secondary Growth
New Phytologist Review Tansley review Evolution of development of vascular cambia and secondary growth Author for correspondence: Rachel Spicer1 and Andrew Groover2 Andrew Groover 1The Rowland Institute at Harvard, Cambridge, MA, USA; 2Institute of Forest Genetics, Pacific Tel: +1 530 759 1738 Email: [email protected] Southwest Research Station, USDA Forest Service, Davis, CA, USA Received: 29 December 2009 Accepted: 14 February 2010 Contents Summary 577 V. Evolution of development approaches for the study 587 of secondary vascular growth I. Introduction 577 VI. Conclusions 589 II. Generalized function of vascular cambia and their 578 developmental and evolutionary origins Acknowledgements 589 III. Variation in secondary vascular growth in angiosperms 581 References 589 IV. Genes and mechanisms regulating secondary vascular 584 growth and their evolutionary origins Summary New Phytologist (2010) 186: 577–592 Secondary growth from vascular cambia results in radial, woody growth of stems. doi: 10.1111/j.1469-8137.2010.03236.x The innovation of secondary vascular development during plant evolution allowed the production of novel plant forms ranging from massive forest trees to flexible, Key words: forest trees, genomics, Populus, woody lianas. We present examples of the extensive phylogenetic variation in sec- wood anatomy, wood formation. ondary vascular growth and discuss current knowledge of genes that regulate the development of vascular cambia and woody tissues. From these foundations, we propose strategies for genomics-based research in the evolution of development, which is a next logical step in the study of secondary growth. I. Introduction this pattern characterizes most extant forest trees, significant variation exists among taxa, ranging from extinct woody Secondary vascular growth provides a means of radially lycopods and horsetails with unifacial cambia (Cichan & thickening and strengthening plant axes initiated during Taylor, 1990; Willis & McElwain, 2002), to angiosperms primary, or apical growth. -
Bibliography of Isoetes
BIBLIOGRAPHY OF ISOETES ALLEN, B.M. 1975. A note on the distribution of Isoetes in the Cadiz Province, Spain. Fern Gaz. (U.K.) 11 (2-3): 163-164 (1975). ALONSO, PAZ, E. 1989. Notas sobre plantas nuevas o interesantes para la flora Uruguaya: 1. (Notes on new or interesting plants for the Uruguayan flora: 1.) Comun. Bot. Mus. Hist. Nat. Montevideo 5 (91): 1-4 (1989) - Isoetes pp.2-3 ALSTON, A.H.G. 1982. Isoetaceae: 1. In Steenis, C.G.G.J. van, Holttum, R. E., eds. Flora Malesiana, series 2. Pteridophytes, volume 1. The Hague, Martinus Nijhoff, Dr. W. Junk Publ. 62-64 (1982)- illus., chrom. nos., key. ANDREIS, C., RODONDI, G. 1987. Alcune stazioni di Isoetes echinospora Dur. nel Bresciano e osservazioni al SEM delle spore delle Isoetes della flora Italica. Natura Bresciana no.23: 119-130 (1986 publ. 1987) - illus., maps. 4, ANTHONY, N.C., & E.A. SCHELPE, 1985. Two new taxa and a new combination in southern African Pteridophyta. Bothalia, 15 (3 & 4): 554-555 (1985) ARREGUIN-SANCHEZ, M., 1986. Nuevos registros y taxa interesantes de pteridofitas del Valle de Mexico. (Isoetaceae, Psilotaceae y Selaginellaceae) Phytologia 59 (7): 451-453 (1986) ASH, S., & K.B. PIGG. 1991. A new Jurassic Isoetites (Isoetales) from the Wallowa Terrane in Hells Canyon Oregon and Idaho. Amer. J. Bot. 78: 1636-1642. BAJPAI, U., & H.K. MAHESHWARI,1985. EM studies on the megaspores of Isoetes coromandelina. Phytomorphology, 34 (1-4): 226-231 (1984 publ. 1985) - illus. BALDWIN, W.K.W. 1933. The organization of the young sporophyte of Isoetes engelmanni, A. -
JUDD W.S. Et. Al. (2002) Plant Systematics: a Phylogenetic Approach. Chapter 7. an Overview of Green
UNCORRECTED PAGE PROOFS An Overview of Green Plant Phylogeny he word plant is commonly used to refer to any auto- trophic eukaryotic organism capable of converting light energy into chemical energy via the process of photosynthe- sis. More specifically, these organisms produce carbohydrates from carbon dioxide and water in the presence of chlorophyll inside of organelles called chloroplasts. Sometimes the term plant is extended to include autotrophic prokaryotic forms, especially the (eu)bacterial lineage known as the cyanobacteria (or blue- green algae). Many traditional botany textbooks even include the fungi, which differ dramatically in being heterotrophic eukaryotic organisms that enzymatically break down living or dead organic material and then absorb the simpler products. Fungi appear to be more closely related to animals, another lineage of heterotrophs characterized by eating other organisms and digesting them inter- nally. In this chapter we first briefly discuss the origin and evolution of several separately evolved plant lineages, both to acquaint you with these important branches of the tree of life and to help put the green plant lineage in broad phylogenetic perspective. We then focus attention on the evolution of green plants, emphasizing sev- eral critical transitions. Specifically, we concentrate on the origins of land plants (embryophytes), of vascular plants (tracheophytes), of 1 UNCORRECTED PAGE PROOFS 2 CHAPTER SEVEN seed plants (spermatophytes), and of flowering plants dons.” In some cases it is possible to abandon such (angiosperms). names entirely, but in others it is tempting to retain Although knowledge of fossil plants is critical to a them, either as common names for certain forms of orga- deep understanding of each of these shifts and some key nization (e.g., the “bryophytic” life cycle), or to refer to a fossils are mentioned, much of our discussion focuses on clade (e.g., applying “gymnosperms” to a hypothesized extant groups. -
Pleuromeia from the Lower Triassic of the Far East of the U.S.S.R
Review of Palaeobotany and Palynology, 19 (1975): 221—232 © Elsevier Scientific Publishing Company, Amsterdam — Printed in The Netherlands PLEUROMEIA FROM THE LOWER TRIASSIC OF THE FAR EAST OF THE U.S.S.R. V. A. KRASSILOV and Yu. D. ZAKHAROV Institute of Biology and Pedology, Far-Eastern Scientific Centre, U.S.S.R. Academy of Sciences, Vladivostok (U.S.S.R.) (Received June 26, 1974; accepted for publication November 11, 1974) ABSTRACT Krassilov, V. A. and Zakharov, Yu. D., 1975. Pleuromeia from the Lower Triassic of the Far East of the U.S.S.R. Rev. Palaeobot. Palynol., 19: 221-232. Pleuromeia obrutschewii Elias from Russian Island (Russkiy Ostrov, near Vladivostok) is hardly distinguishable from the European P. sternbergii (Muenster) Corda. The sporangia are adaxial, filling spoon-like depressions of the megasporophylls which have sterile tips. P. olenekensis sp. nov. from the Olenek River (northeastern Siberia) has larger sporangia and much larger megaspores with three-layered walls. The outer layer (ectexosporium) is reticulate. It is assumed that in other species this layer is lacking due to imperfect preservation. Mature megasporophylls, when shed, have a buoy-like shape and are often deposited together with cephalopod shells. This suggests a special mecha- nism of propagation by means of megasporophylls dispersed by water currents. The cosmopolitan distribution of Pleuromeia points to weakened climatic zonation in the Early Triassic. INTRODUCTION Pleuromeia is famous for its spectacular habitus, its alleged phylogenic role as a link between the arborescent lycopods and the reduced Isoetes, and its geological history which is unusually short for a plant genus (Early- Middle Triassic). -
Altered Fluvial Patterns in North China Indicate Rapid Climate Change
www.nature.com/scientificreports OPEN Altered fuvial patterns in North China indicate rapid climate change linked to the Permian-Triassic mass extinction Zhicai Zhu1, Yongqing Liu1*, Hongwei Kuang 1*, Michael J. Benton 2, Andrew J. Newell3, Huan Xu4, Wei An5, Shu’an Ji1, Shichao Xu6, Nan Peng1 & Qingguo Zhai1 The causes of the severest crisis in the history of life around the Permian-Triassic boundary (PTB) remain controversial. Here we report that the latest Permian alluvial plains in Shanxi, North China, went through a rapid transition from meandering rivers to braided rivers and aeolian systems. Soil carbonate carbon isotope (δ13C), oxygen isotope (δ18O), and geochemical signatures of weathering intensity reveal a consistent pattern of deteriorating environments (cool, arid, and anoxic conditions) and climate fuctuations across the PTB. The synchronous ecological collapse is confrmed by a dramatic reduction or disappearance of dominant plants, tetrapods and invertebrates and a bloom of microbially- induced sedimentary structures. A similar rapid switch in fuvial style is seen worldwide (e.g. Karoo Basin, Russia, Australia) in terrestrial boundary sequences, all of which may be considered against a background of global marine regression. The synchronous global expansion of alluvial fans and high- energy braided streams is a response to abrupt climate change associated with aridity, hypoxia, acid rain, and mass wasting. Where neighbouring uplands were not uplifting or basins subsiding, alluvial fans are absent, but in these areas the climate change is evidenced by the disruption of pedogenesis. Te severest ecological crisis in Earth history, the Permian-Triassic mass extinction (PTME), occurred 252 Ma and killed over 90% of marine species and about 70% of continental vertebrate families1,2. -
Retallack 2021 Coal Balls
Palaeogeography, Palaeoclimatology, Palaeoecology 564 (2021) 110185 Contents lists available at ScienceDirect Palaeogeography, Palaeoclimatology, Palaeoecology journal homepage: www.elsevier.com/locate/palaeo Modern analogs reveal the origin of Carboniferous coal balls Gregory Retallack * Department of Earth Science, University of Oregon, Eugene, Oregon 97403-1272, USA ARTICLE INFO ABSTRACT Keywords: Coal balls are calcareous peats with cellular permineralization invaluable for understanding the anatomy of Coal ball Pennsylvanian and Permian fossil plants. Two distinct kinds of coal balls are here recognized in both Holocene Histosol and Pennsylvanian calcareous Histosols. Respirogenic calcite coal balls have arrays of calcite δ18O and δ13C like Carbon isotopes those of desert soil calcic horizons reflecting isotopic composition of CO2 gas from an aerobic microbiome. Permineralization Methanogenic calcite coal balls in contrast have invariant δ18O for a range of δ13C, and formed with anaerobic microbiomes in soil solutions with bicarbonate formed by methane oxidation and sugar fermentation. Respiro genic coal balls are described from Holocene peats in Eight Mile Creek South Australia, and noted from Carboniferous coals near Penistone, Yorkshire. Methanogenic coal balls are described from Carboniferous coals at Berryville (Illinois) and Steubenville (Ohio), Paleocene lignites of Sutton (Alaska), Eocene lignites of Axel Heiberg Island (Nunavut), Pleistocene peats of Konya (Turkey), and Holocene peats of Gramigne di Bando (Italy). Soils and paleosols with coal balls are neither common nor extinct, but were formed by two distinct soil microbiomes. 1. Introduction and Royer, 2019). Although best known from Euramerican coal mea sures of Pennsylvanian age (Greb et al., 1999; Raymond et al., 2012, Coal balls were best defined by Seward (1895, p. -
The Joggins Fossil Cliffs UNESCO World Heritage Site: a Review of Recent Research
The Joggins Fossil Cliffs UNESCO World Heritage site: a review of recent research Melissa Grey¹,²* and Zoe V. Finkel² 1. Joggins Fossil Institute, 100 Main St. Joggins, Nova Scotia B0L 1A0, Canada 2. Environmental Science Program, Mount Allison University, Sackville, New Brunswick E4L 1G7, Canada *Corresponding author: <[email protected]> Date received: 28 July 2010 ¶ Date accepted 25 May 2011 ABSTRACT The Joggins Fossil Cliffs UNESCO World Heritage Site is a Carboniferous coastal section along the shores of the Cumberland Basin, an extension of Chignecto Bay, itself an arm of the Bay of Fundy, with excellent preservation of biota preserved in their environmental context. The Cliffs provide insight into the Late Carboniferous (Pennsylvanian) world, the most important interval in Earth’s past for the formation of coal. The site has had a long history of scientific research and, while there have been well over 100 publications in over 150 years of research at the Cliffs, discoveries continue and critical questions remain. Recent research (post-1950) falls under one of three categories: general geol- ogy; paleobiology; and paleoenvironmental reconstruction, and provides a context for future work at the site. While recent research has made large strides in our understanding of the Late Carboniferous, many questions remain to be studied and resolved, and interest in addressing these issues is clearly not waning. Within the World Heritage Site, we suggest that the uppermost formations (Springhill Mines and Ragged Reef), paleosols, floral and trace fossil tax- onomy, and microevolutionary patterns are among the most promising areas for future study. RÉSUMÉ Le site du patrimoine mondial de l’UNESCO des falaises fossilifères de Joggins est situé sur une partie du littoral qui date du Carbonifère, sur les rives du bassin de Cumberland, qui est une prolongation de la baie de Chignecto, elle-même un bras de la baie de Fundy. -
Threatened and Endangered Species List
Effective April 15, 2009 - List is subject to revision For a complete list of Tennessee's Rare and Endangered Species, visit the Natural Areas website at http://tennessee.gov/environment/na/ Aquatic and Semi-aquatic Plants and Aquatic Animals with Protected Status State Federal Type Class Order Scientific Name Common Name Status Status Habit Amphibian Amphibia Anura Gyrinophilus gulolineatus Berry Cave Salamander T Amphibian Amphibia Anura Gyrinophilus palleucus Tennessee Cave Salamander T Crustacean Malacostraca Decapoda Cambarus bouchardi Big South Fork Crayfish E Crustacean Malacostraca Decapoda Cambarus cymatilis A Crayfish E Crustacean Malacostraca Decapoda Cambarus deweesae Valley Flame Crayfish E Crustacean Malacostraca Decapoda Cambarus extraneus Chickamauga Crayfish T Crustacean Malacostraca Decapoda Cambarus obeyensis Obey Crayfish T Crustacean Malacostraca Decapoda Cambarus pristinus A Crayfish E Crustacean Malacostraca Decapoda Cambarus williami "Brawley's Fork Crayfish" E Crustacean Malacostraca Decapoda Fallicambarus hortoni Hatchie Burrowing Crayfish E Crustacean Malocostraca Decapoda Orconectes incomptus Tennessee Cave Crayfish E Crustacean Malocostraca Decapoda Orconectes shoupi Nashville Crayfish E LE Crustacean Malocostraca Decapoda Orconectes wrighti A Crayfish E Fern and Fern Ally Filicopsida Polypodiales Dryopteris carthusiana Spinulose Shield Fern T Bogs Fern and Fern Ally Filicopsida Polypodiales Dryopteris cristata Crested Shield-Fern T FACW, OBL, Bogs Fern and Fern Ally Filicopsida Polypodiales Trichomanes boschianum -
Inferring the Evolutionary Reduction of Corm Lobation in Isoëtes Using Bayesian Model- Averaged Ancestral State Reconstruction
UC Berkeley UC Berkeley Previously Published Works Title Inferring the evolutionary reduction of corm lobation in Isoëtes using Bayesian model- averaged ancestral state reconstruction. Permalink https://escholarship.org/uc/item/39h708p5 Journal American journal of botany, 105(2) ISSN 0002-9122 Authors Freund, Forrest D Freyman, William A Rothfels, Carl J Publication Date 2018-02-01 DOI 10.1002/ajb2.1024 Peer reviewed eScholarship.org Powered by the California Digital Library University of California RESEARCH ARTICLE BRIEF COMMUNICATION Inferring the evolutionary reduction of corm lobation in Isoëtes using Bayesian model- averaged ancestral state reconstruction Forrest D. Freund1,2, William A. Freyman1,2, and Carl J. Rothfels1 Manuscript received 26 October 2017; revision accepted 2 January PREMISE OF THE STUDY: Inferring the evolution of characters in Isoëtes has been problematic, 2018. as these plants are morphologically conservative and yet highly variable and homoplasious 1 Department of Integrative Biology, University of California, within that conserved base morphology. However, molecular phylogenies have given us a Berkeley, Berkeley, CA 94720-3140, USA valuable tool for testing hypotheses of character evolution within the genus, such as the 2 Authors for correspondence (e-mail: [email protected], hypothesis of ongoing morphological reductions. [email protected]) Citation: Freund, F. D., W. A. Freyman, and C. J. Rothfels. 2018. METHODS: We examined the reduction in lobe number on the underground trunk, or corm, by Inferring the evolutionary reduction of corm lobation in Isoëtes using combining the most recent molecular phylogeny with morphological descriptions gathered Bayesian model- averaged ancestral state reconstruction. American from the literature and observations of living specimens. -
Plastid Genomes of the Early Vascular Plant Genus Selaginella Have Unusual Direct Repeat Structures and Drastically Reduced Gene Numbers
International Journal of Molecular Sciences Article Plastid Genomes of the Early Vascular Plant Genus Selaginella Have Unusual Direct Repeat Structures and Drastically Reduced Gene Numbers Hyeonah Shim 1, Hyeon Ju Lee 1, Junki Lee 1,2, Hyun-Oh Lee 1,2, Jong-Hwa Kim 3, Tae-Jin Yang 1,* and Nam-Soo Kim 4,* 1 Department of Agriculture, Forestry and Bioresources, Plant Genomics & Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture & Life Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea; [email protected] (H.S.); [email protected] (H.J.L.); [email protected] (J.L.); [email protected] (H.-O.L.) 2 Phyzen Genomics Institute, Seongnam 13558, Korea 3 Department of Horticulture, Kangwon National University, Chuncheon 24341, Korea; [email protected] 4 Department of Molecular Bioscience, Kangwon National University, Chuncheon 24341, Korea * Correspondence: [email protected] (T.-J.Y.); [email protected] (N.-S.K.); Tel.: +82-2-880-4547 (T.-J.Y.); +82-33-250-6472 (N.-S.K.) Abstract: The early vascular plants in the genus Selaginella, which is the sole genus of the Selaginel- laceae family, have an important place in evolutionary history, along with ferns, as such plants are valuable resources for deciphering plant evolution. In this study, we sequenced and assembled the plastid genome (plastome) sequences of two Selaginella tamariscina individuals, as well as Se- laginella stauntoniana and Selaginella involvens. Unlike the inverted repeat (IR) structures typically found in plant plastomes, Selaginella species had direct repeat (DR) structures, which were confirmed by Oxford Nanopore long-read sequence assembly. -
The Joggins Cliffs of Nova Scotia: B2 the Joggins Cliffs of Nova Scotia: Lyell & Co's "Coal Age Galapagos" J.H
GAC-MAC-CSPG-CSSS Pre-conference Field Trips A1 Contamination in the South Mountain Batholith and Port Mouton Pluton, southern Nova Scotia HALIFAX Building Bridges—across science, through time, around2005 the world D. Barrie Clarke and Saskia Erdmann A2 Salt tectonics and sedimentation in western Cape Breton Island, Nova Scotia Ian Davison and Chris Jauer A3 Glaciation and landscapes of the Halifax region, Nova Scotia Ralph Stea and John Gosse A4 Structural geology and vein arrays of lode gold deposits, Meguma terrane, Nova Scotia Rick Horne A5 Facies heterogeneity in lacustrine basins: the transtensional Moncton Basin (Mississippian) and extensional Fundy Basin (Triassic-Jurassic), New Brunswick and Nova Scotia David Keighley and David E. Brown A6 Geological setting of intrusion-related gold mineralization in southwestern New Brunswick Kathleen Thorne, Malcolm McLeod, Les Fyffe, and David Lentz A7 The Triassic-Jurassic faunal and floral transition in the Fundy Basin, Nova Scotia Paul Olsen, Jessica Whiteside, and Tim Fedak Post-conference Field Trips B1 Accretion of peri-Gondwanan terranes, northern mainland Nova Scotia Field Trip B2 and southern New Brunswick Sandra Barr, Susan Johnson, Brendan Murphy, Georgia Pe-Piper, David Piper, and Chris White The Joggins Cliffs of Nova Scotia: B2 The Joggins Cliffs of Nova Scotia: Lyell & Co's "Coal Age Galapagos" J.H. Calder, M.R. Gibling, and M.C. Rygel Lyell & Co's "Coal Age Galapagos” B3 Geology and volcanology of the Jurassic North Mountain Basalt, southern Nova Scotia Dan Kontak, Jarda Dostal, -
1 Summary of Professional Accomplishments 1. Name Anna
Summary of Professional Accomplishments 1. Name Anna Mader 2. Diplomas, degrees conferred in specific areas of science or arts, including the name of the institution which conferred the degree, year of degree conferment, title of the PhD dissertation 1986: Master’s degree diploma at the Institute of Geological Sciences of the Jagiellonian University. 1986: Master’s degree in geology, Faculty of Biology and Earth Sciences of the Jagiellonian University. 1991: Defense of PhD dissertation “Palynological stratigraphy of Upper Permian and Lower Buntsandstein in the western part of the Holy Cross Mountains” at the Polish Geological Institute 1991: Doctor of Natural Sciences in the field of geology, awarded by the Scientific Council of the Polish Geological Institute 3. Information on employment in research institutes or faculties/departments or school of arts 1986 – 1999 Polish Geological Institute, Holy Cross Branch 25-953 Kielce, ul. Zgoda 21 2010 – 2014 Polish Geological Institute –National Research Institute, Holy Cross Branch, 25-953 Kielce, ul. Zgoda 21 2014 – 2018 Polish Geological Institute –National Research Institute 00-975 Warszawa, ul. Rakowiecka 4 2018 – present day Polish Geological Institute –National Research Institute, Holy Cross Branch, 25-953 Kielce, ul. Zgoda 21 1986 –1987 Intern 1987 – 1988 Geologist 1989 senior Geologist 1989 – 1990 Assistant 1990 – 1991 senior Assistant 1991 – 1992 Assistant 1992 – 1999 Lecturer (adjunct) 1999 – 2010 break in work due to family situation 2010 – 2011 senior specialist in geology 2011 – 2018 Lecturer (adjunct) 2018 senior museum curator 2018 – present day senior specialist in geology 1 4. Description of the achievements, set out in art. 219 par. 1 point 2 of the Act 4.1.