Passport for Open Science Is a Guide Designed to Accompany You at Every Step Glossary
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
CNRS ROADMAP for OPEN SCIENCE 18 November 2019
CNRS ROADMAP FOR OPEN SCIENCE 18 November 2019 TABLE OF CONTENTS Introduction 4 1. Publications 6 2. Research data 8 3. Text and data mining and analysis 10 4. Individual evaluation of researchers and Open Science 11 5. Recasting Scientific and Technical Information for Open Science 12 6. Training and skills 13 7. International positioning 14 INTRODUCTION The international movement towards Open Science started more than 30 years ago and has undergone unprecedented development since the web made it possible on a global scale with reasonable costs. The dissemination of scientific production on the Internet, its identification and archiving lift the barriers to permanent access without challenging the protection of personal data or intellectual property. Now is the time to make it “as open as possible, as closed as necessary”. Open Science is not only about promoting a transversal approach to the sharing of scientific results. By opening up data, processes, codes, methods or protocols, it also offers a new way of doing science. Several scientific, civic and socio-economic reasons make Just over a year ago, France embarked on this vast transfor- the development of Open Science essential today: mation movement. Presented on 4 July 2018 by the Minister • Sharing scientific knowledge makes research more ef- of Higher Education,Research and Innovation, the “Natio- fective, more visible, and less redundant. Open access to nal Plan for Open Science”1 aims, in the words of Frédérique data and results is a sea change for the way research is Vidal, to ensure that “the results of scientific research are done, and opens the way to the use of new tools. -
A Quick Guide to Scholarly Publishing
A QUICK GUIDE TO SCHOLARLY PUBLISHING GRADUATE WRITING CENTER • GRADUATE DIVISION UNIVERSITY OF CALIFORNIA • BERKELEY Belcher, Wendy Laura. Writing Your Journal Article in 12 Weeks: A Guide to Academic Publishing Success. Thousand Oaks, CA: SAGE Publications, 2009. Benson, Philippa J., and Susan C. Silver. What Editors Want: An Author’s Guide to Scientific Journal Publishing. Chicago: University of Chicago Press, 2013. Derricourt, Robin. An Author’s Guide to Scholarly Publishing. Princeton, NJ: Princeton University Press, 1996. Germano, William. From Dissertation to Book. 2nd ed. Chicago Guides to Writing, Editing, and Publishing. Chicago: University of Chicago Press, 2013. ———. Getting It Published: A Guide for Scholars and Anyone Else Serious about Serious Books. 3rd ed. Chicago: University of Chicago Press, 2016. Goldbort, Robert. Writing for Science. New Haven & London: Yale University Press, 2006. Harman, Eleanor, Ian Montagnes, Siobhan McMenemy, and Chris Bucci, eds. The Thesis and the Book: A Guide for First- Time Academic Authors. 2nd ed. Toronto: University of Toronto Press, 2003. Harmon, Joseph E., and Alan G. Gross. The Craft of Scientific Communication. Chicago: University of Chicago Press, 2010. Huff, Anne Sigismund. Writing for Scholarly Publication. Thousand Oaks, CA: SAGE Publications, 1999. Luey, Beth. Handbook for Academic Authors. 5th ed. Cambridge, UK: Cambridge University Press, 2009. Luey, Beth, ed. Revising Your Dissertation: Advice from Leading Editors. Updated ed. Berkeley: University of California Press, 2007. Matthews, Janice R., John M. Bowen, and Robert W. Matthews. Successful Scientific Writing: A Step-by-Step Guide for the Biological and Medical Sciences. 3rd ed. Cambridge, UK: Cambridge University Press, 2008. Moxley, Joseph M. PUBLISH, Don’t Perish: The Scholar’s Guide to Academic Writing and Publishing. -
Scientific Journal Article: Writing Summaries and Critiques Definition of Genre Summaries and Critiques Are Two Ways to Write a Review of a Scientific Journal Article
How to Read and Review a Scientific Journal Article: Writing Summaries and Critiques Definition of Genre Summaries and critiques are two ways to write a review of a scientific journal article. Both types of writing ask you first to read and understand an article from the primary literature about your topic. The summary involves briefly but accurately stating the key points of the article for a reader who has not read the original article. The critique begins by summarizing the article and then analyzes and evaluates the author’s research. Summaries and critiques help you learn to synthesize information from different sources and are usually limited to two pages maximum. Actions to Take 1. Skim the article without taking notes: cture.” 2. Re-read the article more carefully: is at the very end of the paper) and “Results” sections. Was the study repeated? What was the sample size? Is this representative of the larger population? What variables were held constant? Was there a control? What factors might affect the outcome? 3. Read the “Materials and Methods” and “Results” sections multiple times: raphs, tables, and diagrams. 4. Before you begin the first draft of your summary: Try to describe the article in your own words first. Try to distill the article down to its “scientific essence.” -written summary: The egg capsules of the marine snails Nucella lamellosa and N. lima protect developing embryos against low-salinity stress, even though the solute concentration within the capsules falls to near that of the surrounding water within about 1 h. 5. Write a draft of your summary: and avoid unintentional plagiarism. -
An Initiative to Track Sentiments in Altmetrics
Halevi, G., & Schimming, L. (2018). An Initiative to Track Sentiments in Altmetrics. Journal of Altmetrics, 1(1): 2. DOI: https://doi.org/10.29024/joa.1 PERSPECTIVE An Initiative to Track Sentiments in Altmetrics Gali Halevi and Laura Schimming Icahn School of Medicine at Mount Sinai, US Corresponding author: Gali Halevi ([email protected]) A recent survey from Pew Research Center (NW, Washington & Inquiries 2018) found that over 44 million people receive science-related information from social media channels to which they subscribe. These include a variety of topics such as new discoveries in health sciences as well as “news you can use” information with practical tips (p. 3). Social and news media attention to scientific publications has been tracked for almost a decade by several platforms which aggregate all public mentions of and interactions with scientific publications. Since the amount of comments, shares, and discussions of scientific publications can reach an audience of thousands, understanding the overall “sentiment” towards the published research is a mammoth task and typically involves merely reading as many posts, shares, and comments as possible. This paper describes an initiative to track and provide sentiment analysis to large social and news media mentions and label them as “positive”, “negative” or “neutral”. Such labels will enable an overall understanding of the content that lies within these social and news media mentions of scientific publications. Keywords: sentiment analysis; opinion mining; scholarly output Background Traditionally, the impact of research has been measured through citations (Cronin 1984; Garfield 1964; Halevi & Moed 2015; Moed 2006, 2015; Seglen 1997). The number of citations a paper receives over time has been directly correlated to the perceived impact of the article. -
Consistent Variations in Personality Traits and Their Potential for Genetic Improvement in The
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.21.257881. this version posted August 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Consistent variations in personality traits and their potential for genetic improvement in the 2 biocontrol agent Trichogramma evanescens 3 4 Silène Lartiguea,b,c, Myriam Yalaouib, Jean Belliardb, Claire Caravelb, Louise Jeandrozb, 5 Géraldine Groussierb, Vincent Calcagnob, Philippe Louâprec, François-Xavier Dechaume- 6 Moncharmontd, Thibaut Malausab and Jérôme Moreauc, e 7 8 a ENGREF AgroParisTech, Paris, France 9 10 b UMR Institut Sophia Agrobiotech, INRAE, UCA, CNRS, 06903 Sophia Antipolis, France 11 12 c UMR CNRS 6282 Biogéosciences, Université Bourgogne Franche-Comté, 6 Boulevard 13 Gabriel, 21000 Dijon, France 14 15 d Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR 5023 LEHNA, 69622 16 Villeurbanne, France 17 18 e Centre d'Études Biologiques de Chizé, UMR 7372, CNRS & La Rochelle Université, 79360 19 Villiers-en-bois, France 20 21 * Corresponding author: S. Lartigue, UMR Institut Sophia Agrobiotech, INRAE, UCA, 22 CNRS, Sophia Antipolis, France. E-mail address: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.08.21.257881. this version posted August 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 23 Abstract 24 Improvements in the biological control of agricultural pests require improvements in the 25 phenotyping methods used by practitioners to select efficient biological control agent (BCA) 26 populations in industrial rearing or field conditions. -
Open Access Developments in France: the HAL Open Archives System Pierre Baruch
Open Access Developments in France: the HAL Open Archives System Pierre Baruch To cite this version: Pierre Baruch. Open Access Developments in France: the HAL Open Archives System. Learned Publishing, Association of Learned and Professional Society Publishers, 2007, 20, pp.267-282. 10.1087/095315107X239636. hal-00176428 HAL Id: hal-00176428 https://hal.archives-ouvertes.fr/hal-00176428 Submitted on 3 Oct 2007 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Open Access Developments in France: the HAL Open Archives System Pierre Baruch Professor Emeritus, Université Denis Diderot – Paris 7 ABSTRACT :This article presents an overview of Open Access publishing and Open Access archiving in France. In natural sciences, most articles are published in international journals; authors must therefore comply with the policies of their publishers, irrespective of their nationality. For humanities and social sciences, where publication tends to be distributed among many small journals, portals have been created to provide electronic publishing, with varied access policies. Open Archives repositories have been in existence in France since 2001; from 2006, a proactive policy led the main research agencies and universities to coordinate their actions towards a common archiving platform, HAL (Hyper Articles on Line), operated by CNRS (Centre National pour la Recherche Scientifique) , with individual portals, either thematic or institutional. -
Phenotypic Plasticity, Population Structure and Adaptation in a Young Weed Species with a Worldwide Distribution A
Phenotypic plasticity, population structure and adaptation in a young weed species with a worldwide distribution A. Cornille, M. Tiret, A. Salcedo, H.R. Huang, M. Orsucci, P. Milesi, D. Kryvokhyzha, K. Holm, X.J. Ge, J.R. Stinchcombe, et al. To cite this version: A. Cornille, M. Tiret, A. Salcedo, H.R. Huang, M. Orsucci, et al.. Phenotypic plasticity, population structure and adaptation in a young weed species with a worldwide distribution. 2020. hal-03081389 HAL Id: hal-03081389 https://hal.archives-ouvertes.fr/hal-03081389 Preprint submitted on 6 Jan 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. bioRxiv preprint doi: https://doi.org/10.1101/2020.11.27.401562; this version posted November 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Phenotypic plasticity, population structure and adaptation in a young weed species 2 with a worldwide distribution. 3 4 Cornille, A.1,2¶*, Tiret, M.1*, Salcedo, A.3*, Huang, H.R.4,5*, Orsucci, M.6, Milesi, P. -
Downloads Presented on the Abstract Page
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.27.063578; this version posted April 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. A systematic examination of preprint platforms for use in the medical and biomedical sciences setting Jamie J Kirkham1*, Naomi Penfold2, Fiona Murphy3, Isabelle Boutron4, John PA Ioannidis5, Jessica K Polka2, David Moher6,7 1Centre for Biostatistics, Manchester Academic Health Science Centre, University of Manchester, Manchester, United Kingdom. 2ASAPbio, San Francisco, CA, USA. 3Murphy Mitchell Consulting Ltd. 4Université de Paris, Centre of Research in Epidemiology and Statistics (CRESS), Inserm, Paris, F-75004 France. 5Meta-Research Innovation Center at Stanford (METRICS) and Departments of Medicine, of Epidemiology and Population Health, of Biomedical Data Science, and of Statistics, Stanford University, Stanford, CA, USA. 6Centre for Journalology, Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Canada. 7School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Canada. *Corresponding Author: Professor Jamie Kirkham Centre for Biostatistics Faculty of Biology, Medicine and Health The University of Manchester Jean McFarlane Building Oxford Road Manchester, M13 9PL, UK Email: [email protected] Tel: +44 (0)161 275 1135 bioRxiv preprint doi: https://doi.org/10.1101/2020.04.27.063578; this version posted April 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
The Thomson Scientific Journal Selection Process
PERSPECTIVES INTERNATIONAL MICROBIOLOGY (2006) 9:135-138 www.im.microbios.org James Testa The Thomson Scientific Director of Editorial journal selection process Development, Thomson Scientific, Philadelphia, Pennsylvania, USA E-mail: [email protected] several multidisciplinary citation indexes. In addition to its Introduction three major components, the Science Citation Index Expanded, the Social Sciences Citation Index, and the Arts The Web of Knowledge is an electronic platform that consists of and Humanities Citation Index, it includes Index Chemicus important searchable bibliographic databases and key analytical and Current Chemical Reactions. Since significant resources tools, such as the Journal Citation Reports (JCR). Several of are dedicated to the selection of the most important and influ- these bibliographic databases pro- ential journals for inclusion in the WoS, we will examine the vide extensive coverage of the lit- journal selection process used erature of specific subjects, such to achieve this goal, particu- as the Life Sciences, Agriculture larly with regard to citation and Forestry, Food Science, Phy- analysis and the role of the sics and Engineering, Medicine, impact factor. Behavioral Sciences, and Animal The journal selection Biology (Fig. 1). The internation- process has been applied con- al patent literature and conference sistently for more than 45 proceedings are also key compo- years. Every journal included nents of the Web of Knowledge. in the WoS has been evaluated In all, this environment covers according to the highest stan- over 22,000 unique journals, more dards, which were originally than 60,000 conferences from defined by Eugene Garfield, 1990 to the present, and approxi- the founder and president mately one and a half million Fig. -
Implementing the RDA Research Data Policy Framework in Slovenian Scientific Journals.Data Science Journal, 19: 49 Pp
Štebe, J, et al. 2020. Implementing the RDA Research Data Policy Framework in Slovenian Scientific Journals. Data Science Journal, 19: 49 pp. 1–15. DOI: https://doi.org/10.5334/dsj-2020-049 RESEARCH PAPER Implementing the RDA Research Data Policy Framework in Slovenian Scientific Journals Janez Štebe, Maja Dolinar, Sonja Bezjak and Ana Inkret Slovenian Social Science Data Archives (ADP – Arhiv družboslovnih podatkov), University of Ljubljana, Ljubljana, SI Corresponding author: Janez Štebe ([email protected]) The paper aims to present the implementation of the RDA research data policy framework in Slovenian scientific journals within the project RDA Node Slovenia. The activity aimed to implement the practice of data sharing and data citation in Slovenian scientific journals and was based on internationally renowned practices and policies, particularly the Research Data Policy Framework of the RDA Data Policy Standardization and Implementation Interest Group. Following this, the RDA Node Slovenia coordination prepared a guidance document that allowed the four pilot participating journals (from fields of archaeology, history, linguistics and social sciences) to adjust their journal policies regarding data sharing, data citation, adapted the definitions of research data and suggested appropriate data repositories that suit their dis- ciplinary specifics. The comparison of results underlines how discipline-specific the aspects of data-sharing are. The pilot proved that a grass-root approach in advancing open science can be successful and well-received in the research community, however, it also pointed out several issues in scientific publishing that would benefit from a planned action on a national level. The context of an underdeveloped data sharing culture, slow implementation of open data strategy by the national research funder and sparse national data service infrastructure creates a unique environment for this study, the result of which can be used in similar contexts worldwide. -
Downloads Have Grown Commen- Surately with Their Uploads [10]
Neuroanatomy and Behaviour, 2020, 2(1), e9. Neuroanatomy ISSN: 2652-1768 and H doi: 10.35430/nab.2020.e9 ε Behaviour PROFESSIONALPERSPECTIVES Enhancing scientific dissemination in neuroscience via preprint peer-review: “Peer Community In Circuit Neuroscience” Marion S. Mercier1, Vincent Magloire1 and Mahesh Karnani2,* 1Institute of Neurology, UCL, London, United Kingdom and 2Institute for Neuroscience, ETH Zürich, Switzerland *[email protected] Abstract The dissemination of scientific results and new technologies in biomedical science is rapidly evolving from an exclusive and fee-oriented publishing system towards more open, free and independent strategies for sharing knowledge. In this context, preprint servers such as bioRxiv answer a very real scientific need by enabling the rapid, free and easy dissemination of findings, regardless of whether these are novel, replicated, or even showcasing negative results. Currently, thousands of manuscripts are being shared via bioRxiv each month, and neuroscience is the largest and fastest growing subject category. However, commenting on bioRxiv is declining and no structured scientific validation such as peer-review is currently available. The Peer Community In (PCI) platform addresses this unmet need by facilitating the rigorous evaluation and validation of preprints, and PCI Circuit Neuroscience (PCI C Neuro) aims to develop and extend this tool for the neuroscience community. Here we discuss PCI C Neuro’s mission, how it works, and why it is an essential initiative in this -
Journal List Emerging Sources Citation Index (Web of Science) 2020
JOURNAL TITLE ISSN eISSN PUBSLISHER NAME PUBLISHER ADDRESS 3C EMPRESA 2254‐3376 2254‐3376 AREA INNOVACION & DESARROLLO C/ELS ALZAMORA NO 17, ALCOY, ALICANTE, SPAIN, 03802 3C TECNOLOGIA 2254‐4143 2254‐4143 3CIENCIAS C/ SANTA ROSA 15, ALCOY, SPAIN, 03802 3C TIC 2254‐6529 2254‐6529 AREA INNOVACION & DESARROLLO C/ELS ALZAMORA NO 17, ALCOY, ALICANTE, SPAIN, 03802 3D RESEARCH 2092‐6731 2092‐6731 SPRINGER HEIDELBERG TIERGARTENSTRASSE 17, HEIDELBERG, GERMANY, D‐69121 3L‐LANGUAGE LINGUISTICS LITERATURE‐THE SOUTHEAST ASIAN JOURNAL OF ENGLISH LANGUAGE STUDIES 0128‐5157 2550‐2247 PENERBIT UNIV KEBANGSAAN MALAYSIA PENERBIT UNIV KEBANGSAAN MALAYSIA, FAC ECONOMICS & MANAGEMENT, BANGI, MALAYSIA, SELANGOR, 43600 452 F‐REVISTA DE TEORIA DE LA LITERATURA Y LITERATURA COMPARADA 2013‐3294 UNIV BARCELONA, FACULTAD FILOLOGIA GRAN VIA DE LES CORTS CATALANES, 585, BARCELONA, SPAIN, 08007 AACA DIGITAL 1988‐5180 1988‐5180 ASOC ARAGONESA CRITICOS ARTE ASOC ARAGONESA CRITICOS ARTE, HUESCA, SPAIN, 00000 AACN ADVANCED CRITICAL CARE 1559‐7768 1559‐7776 AMER ASSOC CRITICAL CARE NURSES 101 COLUMBIA, ALISO VIEJO, USA, CA, 92656 A & A PRACTICE 2325‐7237 2325‐7237 LIPPINCOTT WILLIAMS & WILKINS TWO COMMERCE SQ, 2001 MARKET ST, PHILADELPHIA, USA, PA, 19103 ABAKOS 2316‐9451 2316‐9451 PONTIFICIA UNIV CATOLICA MINAS GERAIS DEPT CIENCIAS BIOLOGICAS, AV DOM JOSE GASPAR 500, CORACAO EUCARISTICO, CEP: 30.535‐610, BELO HORIZONTE, BRAZIL, MG, 00000 ABANICO VETERINARIO 2007‐4204 2007‐4204 SERGIO MARTINEZ GONZALEZ TEZONTLE 171 PEDREGAL SAN JUAN, TEPIC NAYARIT, MEXICO, C P 63164 ABCD‐ARQUIVOS