Unexpected Side Effects of Everyday Medication Through Sirtuin1 Modulation
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A Proposed Method for Noninvasive Assessment of Endothelial Damange Kirsten Menn
Yale University EliScholar – A Digital Platform for Scholarly Publishing at Yale Yale Medicine Thesis Digital Library School of Medicine 11-15-2006 A Proposed Method for Noninvasive Assessment of Endothelial Damange Kirsten Menn Follow this and additional works at: http://elischolar.library.yale.edu/ymtdl Recommended Citation Menn, Kirsten, "A Proposed Method for Noninvasive Assessment of Endothelial Damange" (2006). Yale Medicine Thesis Digital Library. 272. http://elischolar.library.yale.edu/ymtdl/272 This Open Access Thesis is brought to you for free and open access by the School of Medicine at EliScholar – A Digital Platform for Scholarly Publishing at Yale. It has been accepted for inclusion in Yale Medicine Thesis Digital Library by an authorized administrator of EliScholar – A Digital Platform for Scholarly Publishing at Yale. For more information, please contact [email protected]. A PROPOSED METHOD FOR NONINVASIVE ASSESSMENT OF ENDOTHELIAL DAMAGE A Thesis Submitted to the Yale University School of Medicine in Partial Fulfillment of the Requirements for the Degree of Doctor of Medicine By Kirsten Alexandra Menn 2006 Abstract A PROPOSED METHOD FOR NONINVASIVE ASSESSMENT OF ENDOTHELIAL DAMAGE Kirsten A. Menn, Robert B. Schonberger, William L. Worden, Kaveh Shahmohammadi, Tyler J. Silverman, Robert Stout, Kirk Shelley, David G. Silverman, Department of Anesthesiology, Yale University, School of Medicine, New Haven, CT. Transdermal microvascular studies of endothelial cell function have typically used iontophoresis to facilitate acetylcholine absorption, but iontophoresis introduces an important confounding stimulus that can alter the behavior of the microvasculature. This study examines a non-iontophoretic technique for transdermal microvascular studies using acetylcholine and nitroglycerin and demonstrates a relatively impaired vasodilatory response to these substances in a population with known microvascular pathology. -
View, the Catalytic Center of Bnoss Is Almost Identical to Mnos Except That a Conserved Val Near Heme Iron in Mnos Is Substituted by Iie[25]
STUDY OF ELECTRON TRANSFER THROUGH THE REDUCTASE DOMAIN OF NEURONAL NITRIC OXIDE SYNTHASE AND DEVELOPMENT OF BACTERIAL NITRIC OXIDE SYNTHASE INHIBITORS YUE DAI Bachelor of Science in Chemistry Wuhan University June 2008 submitted in partial fulfillment of requirements for the degree DOCTOR OF PHILOSOPHY IN CLINICAL AND BIOANALYTICAL CHEMISTRY at the CLEVELAND STATE UNIVERSITY July 2016 We hereby approve this dissertation for Yue Dai Candidate for the Doctor of Philosophy in Clinical-Bioanalytical Chemistry Degree for the Department of Chemistry and CLEVELAND STATE UNIVERSITY’S College of Graduate Studies by Dennis J. Stuehr. PhD. Department of Pathobiology, Cleveland Clinic / July 8th 2016 Mekki Bayachou. PhD. Department of Chemistry / July 8th 2016 Thomas M. McIntyre. PhD. Department of Cellular and Molecular Medicine, Cleveland Clinic / July 8th 2016 Bin Su. PhD. Department of Chemistry / July 8th 2016 Jun Qin. PhD. Department of Molecular Cardiology, Cleveland Clinic / July 8th 2016 Student’s Date of Defense: July 8th 2016 ACKNOWLEDGEMENT First I would like to express my special appreciation and thanks to my Ph. D. mentor, Dr. Dennis Stuehr. You have been a tremendous mentor for me. It is your constant patience, encouraging and support that guided me on the road of becoming a research scientist. Your advices on both research and life have been priceless for me. I would like to thank my committee members - Professor Mekki Bayachou, Professor Bin Su, Dr. Thomas McIntyre, Dr. Jun Qin and my previous committee members - Dr. Donald Jacobsen and Dr. Saurav Misra for sharing brilliant comments and suggestions with me. I would like to thank all our lab members for their help ever since I joint our lab. -
Protein S-Nitrosylation: Methods of Detection and Cellular Regulation
Protein S-Nitrosylation: Methods of Detection and Cellular Regulation by Michael Tcheupdjian Forrester Department of Biochemistry Duke University Date:_______________________ Approved: ___________________________ Jonathan S. Stamler, MD (Supervisor) ___________________________ Irwin Fridovich, PhD ___________________________ K. V. Rajagopalan, PhD ___________________________ Dennis J. Thiele, PhD ___________________________ Eric J. Toone, PhD Dissertation submitted in partial fulfillment of the requirements for the degree of doctor of philosophy in the Department of Biochemistry in the Graduate School of Duke University 2009 i v ABSTRACT Protein S-Nitrosylation: Methods of Detection and Cellular Regulation by Michael Tcheupdjian Forrester Department of Biochemistry Duke University Date:_______________________ Approved: ___________________________ Jonathan S. Stamler, MD (Supervisor) ___________________________ Irwin Fridovich, PhD ___________________________ K. V. Rajagopalan, PhD ___________________________ Dennis J. Thiele, PhD ___________________________ Eric J. Toone, PhD An abstract of a dissertation submitted in partial fulfillment of the requirements for the degree of doctor of philosophy in the Department of Biochemistry in the Graduate School of Duke University 2009 i v Copyright by Michael T. Forrester 2009 Abstract Protein S-nitrosylation—the post-translational modification of cysteine thiols into S-nitrosothiols—is a principle mechanism of nitric oxide-based signaling. Studies have demonstrated myriad roles for S-nitrosylation in organisms from bacteria to humans, and recent efforts have begun to elucidate how this redox-based modification is regulated during physiological and pathophysiological conditions. This doctoral thesis is focused on the 1) analysis of existing methodologies for the detection of protein S-nitrosylation; 2) development of new methodologies for the detection of protein S-nitrosylation and 3) discovery of novel enzymatic mechanisms by which S-nitrosylation is regulated in vivo. -
Effect of a Caloric Restriction Based On
UNIVERSIDAD AUTÓNOMA DE MADRID FACULTAD DE CIENCIAS DEPARTAMENTO DE BIOLOGÍA DOCTORAL THESIS Biology PhD “Effect of a caloric restriction based on the Mediterranean diet and intake of traditional Mediterranean foods on the expression of microRNAs regulating molecular processes associated with aging” INSTITUTO MADRILEÑO DE ESTUDIOS AVANZADOS EN ALIMENTACIÓN (IMDEA FOOD INSTITUTE) VÍCTOR MICÓ MORENO Madrid, 2018 UNIVERSIDAD AUTÓNOMA DE MADRID FACULTAD DE CIENCIAS DEPARTAMENTO DE BIOLOGÍA DOCTORAL THESIS Biology PhD “Effect of a caloric restriction based on the Mediterranean diet and intake of traditional Mediterranean foods on the expression of microRNAs regulating molecular processes associated with aging” INSTITUTO MADRILEÑO DE ESTUDIOS AVANZADOS EN ALIMENTACIÓN (IMDEA FOOD INSTITUTE) Memoria presentada por: Víctor Micó Moreno Para optar al grado de: DOCTOR EN BIOLOGÍA Doña Lidia Ángeles Daimiel Ruíz, Doctora en Biología Celular y Genética por la Universidad Autónoma de Madrid, investigadora del Instituto IMDEA Alimentación, informa favorablemente la solicitud de autorización de defensa de la tesis doctoral con el Título: “Effect of a caloric restriction based on the Mediterranean diet and intake of traditional Mediterranean foods on the expression of microRNAs regulating molecular processes associated with aging”, presentada por Don Víctor Micó Moreno para optar al grado de Doctor en Biología. Este trabajo ha sido realizado en el Instituto Madrileño de Estudios Avanzados en Alimentación (IMDEA Alimentación) bajo su dirección, y cumple satisfactoriamente las condiciones requeridas por el Departamento de Biología de la Universidad Autónoma de Madrid para optar al Título de Doctor. Ha actuado como tutor académico, y presenta su conformidad el Dr. Carlos Francisco Sentís Castaño, vicedecano de Personal Docente e Investigador y profesor titular del Departamento de Biología de la Facultad de Ciencias de la Universidad Autónoma de Madrid. -
Electrochemical Measurement of Nitric Oxide from Biological Systems
ELECTROCHEMICAL MEASUREMENT OF NITRIC OXIDE FROM BIOLOGICAL SYSTEMS Rebecca Anne Hunter A dissertation submitted to the faculty at the University of North Carolina at Chapel Hill in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Department of Chemistry (Analytical Chemistry). Chapel Hill 2014 Approved by: Mark H. Schoenfisch Royce W. Murray James W. Jorgenson Bruce A. Cairns Robert Maile © 2014 Rebecca Anne Hunter ALL RIGHTS RESERVED ii ABSTRACT REBECCA ANNE HUNTER: Electrochemical Detection of Nitric Oxide from Biological Systems (Under the direction of Mark H. Schoenfisch) Nitric oxide (NO) is known to be involved in a number of physiological processes, including the immune response. As such, its role in severe infection and sepsis has been investigated, but previous measurement techniques have relied on complicated instrumentation or the quantification of NO byproducts (e.g., nitrate and nitrite). Herein, the fabrication of a microfluidic amperometric sensor for the direct detection of NO in whole blood is described. These sensors were used to evaluate the potential of NO and nitrosothiols (a stable transporter) as prognostic and/or diagnostic biomarkers for infection and sepsis. The microfluidic devices facilitated the selective electrochemical measurement of NO in small volumes of blood at the point-of-care, with adequate sensitivity and limits of detection achieved in buffer, wound fluid, and whole blood. A green (530 nm) light-emitting diode was coupled to the device to enable photolysis of S-nitrosothiol species with subsequent NO detection. While inefficient photolysis prevented the measurement of nitrosothiols in whole blood, detection in serum was achieved. -
Nitric Oxide: a Key Regulator of Myeloid Inflammatory Cell Apoptosis
Cell Death and Differentiation (2003) 10, 418–430 & 2003 Nature Publishing Group All rights reserved 1350-9047/03 $25.00 www.nature.com/cdd Review Nitric oxide: a key regulator of myeloid inflammatory cell apoptosis Introduction EL Taylor*,1, IL Megson2, C Haslett1 and AG Rossi1 The free radical nitric oxide (NO) was first discovered as an 1 Centre for Inflammation Research, Rayne Laboratory, University of Edinburgh, endogenous vasodilator released from the endothelium to Medical School, Teviot Place, Edinburgh EH8 9AG, UK regulate vascular tone.1 However, it is now known that NO is a 2 Centre for Cardiovascular Science, University of Edinburgh, Hugh Robson key mediator in a great number of physiological and Building, George Square, Edinburgh EH8 9XD, UK pathophysiological processes (see Quinn).2 This ubiquitous * Corresponding author: EL Taylor, Centre for Inflammation Research, Rayne Laboratory, University of Edinburgh, Medical School, Teviot Place, Edinburgh signalling molecule can regulate the rate of apoptosis, or EH8 9AG, UK. Tel.: +44 131 651 1323; Fax: +44 131 650 4384; programmed cell death, in many cell types, including human E-mail: [email protected] inflammatory cells. Whether or not cells undergo apoptosis depends on the net balance of a large number of pro- versus Received 30.4.02; revised 29.8.02; accepted 2.9.02 antiapoptotic factors. Studies have revealed that NO Edited by G. Melino has both pro and antiapoptotic properties, depending largely on the concentration and flux of NO, and the cell type under scrutiny (for reviews, see Nicotera et al.3 and Kim et Abstract al.4). -
Current Advances of Nitric Oxide in Cancer and Anticancer Therapeutics
Review Current Advances of Nitric Oxide in Cancer and Anticancer Therapeutics Joel Mintz 1,†, Anastasia Vedenko 2,†, Omar Rosete 3 , Khushi Shah 4, Gabriella Goldstein 5 , Joshua M. Hare 2,6,7 , Ranjith Ramasamy 3,6,* and Himanshu Arora 2,3,6,* 1 Dr. Kiran C. Patel College of Allopathic Medicine, Nova Southeastern University, Davie, FL 33328, USA; [email protected] 2 John P Hussman Institute for Human Genomics, Miller School of Medicine, University of Miami, Miami, FL 33136, USA; [email protected] (A.V.); [email protected] (J.M.H.) 3 Department of Urology, Miller School of Medicine, University of Miami, Miami, FL 33136, USA; [email protected] 4 College of Arts and Sciences, University of Miami, Miami, FL 33146, USA; [email protected] 5 College of Health Professions and Sciences, University of Central Florida, Orlando, FL 32816, USA; [email protected] 6 The Interdisciplinary Stem Cell Institute, Miller School of Medicine, University of Miami, Miami, FL 33136, USA 7 Department of Medicine, Cardiology Division, Miller School of Medicine, University of Miami, Miami, FL 33136, USA * Correspondence: [email protected] (R.R.); [email protected] (H.A.) † These authors contributed equally to this work. Abstract: Nitric oxide (NO) is a short-lived, ubiquitous signaling molecule that affects numerous critical functions in the body. There are markedly conflicting findings in the literature regarding the bimodal effects of NO in carcinogenesis and tumor progression, which has important consequences for treatment. Several preclinical and clinical studies have suggested that both pro- and antitumori- Citation: Mintz, J.; Vedenko, A.; genic effects of NO depend on multiple aspects, including, but not limited to, tissue of generation, the Rosete, O.; Shah, K.; Goldstein, G.; level of production, the oxidative/reductive (redox) environment in which this radical is generated, Hare, J.M; Ramasamy, R.; Arora, H. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Effect of Cyanide by Sodium Nitroprusside (SNP)
Journal of Seed Science, v.41, n.1, p.086-096, 2019 http://dx.doi.org/10.1590/2317-1545v41n1213725 Effect of cyanide by sodium nitroprusside (SNP) application on germination, antioxidative system and lipid peroxidation of Senna macranthera seeds under saline stress1 Aparecida Leonir da Silva2*, Daniel Teixeira Pinheiro3, Eduardo Euclydes de Lima e Borges4, Laércio Junio da Silva3, Denise Cunha Fernandes dos Santos Dias3 ABSTRACT – The effects of NO donors on germination under saline stress have been much investigated for many species, however, there are reports that the effect caused by donors are effects of cyanide present. The aim of this study was to evaluate the effects of sodium nitroprusside (SNP) on germination, antioxidative system and lipid peroxidation of Senna macranthera seeds under saline stress. The osmotic potentials of -0.4 and -0.5 MPa of NaCl were used, as well as the concentration of 100 μM of sodium nitroprusside, inactive sodium nitroprusside. Germination rate, imbibition curves, antioxidant enzyme activity, lipid peroxidation, and protein content were evaluated. Similar effects were observed for sodium nitroprusside and inactive sodium nitroprusside, indicating that these effects were related to the release of the cyanide present in sodium nitroprusside. The sodium nitroprusside (SNP) improves the germination of Senna macranthera seeds under salt stress conditions, through release of cyanide. The cyanide favored germination, reducing lipid peroxidation and increasing the activity of the antioxidant enzymes. Index terms: antioxidant enzymes, NaCl, nitric oxide, salinity. Efeito do cianeto via aplicação de nitroprussiato de sódio (SNP) na germinação, no sistema antioxidativo e na peroxidação lipídica de sementes de Senna macranthera sob estresse salino RESUMO – Os efeitos dos doadores de NO na germinação sob estresse salino têm sido muito investigados para muitas espécies, entretanto, há relatos de que o efeito causado pelos doadores são efeitos do cianeto presente. -
Compartmentation of NAD+-Dependent Signalling ⇑ ⇑ Friedrich Koch-Nolte A, , Stefan Fischer B, Friedrich Haag A, Mathias Ziegler B
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector FEBS Letters 585 (2011) 1651–1656 journal homepage: www.FEBSLetters.org Review Compartmentation of NAD+-dependent signalling ⇑ ⇑ Friedrich Koch-Nolte a, , Stefan Fischer b, Friedrich Haag a, Mathias Ziegler b, a Institute of Immunology, University Medical Center, Martinistr. 52, 20246 Hamburg, Germany b Department of Molecular Biology, University of Bergen, Thormøhlensgate 55, 5008 Bergen, Norway article info abstract Article history: NAD+ plays central roles in energy metabolism as redox carrier. Recent research has identified Received 25 February 2011 important signalling functions of NAD+ that involve its consumption. Although NAD+ is synthesized Revised 21 March 2011 mainly in the cytosol, nucleus and mitochondria, it has been detected also in vesicular and extracel- Accepted 21 March 2011 lular compartments. Three protein families that consume NAD+ in signalling reactions have been Available online 31 March 2011 characterized on a molecular level: ADP-ribosyltransferases (ARTs), Sirtuins (SIRTs), and NAD+ glyco- Edited by Sergio Papa, Gianfranco Gilardi hydrolases (NADases). Members of these families serve important regulatory functions in various and Wilhelm Just cellular compartments, e.g., by linking the cellular energy state to gene expression in the nucleus, by regulating nitrogen metabolism in mitochondria, and by sensing tissue damage in the extracel- + Keywords: lular compartment. Distinct NAD pools may be crucial for these processes. Here, we review the cur- + NAD+ rent knowledge about the compartmentation and biochemistry of NAD -converting enzymes that + ADP-ribosyltransferase control NAD signalling. Sirtuins Ó 2011 Federation of European Biochemical Societies. -
Metabolic Regulation of Epigenetic Modifications and Cell
cancers Review Metabolic Regulation of Epigenetic Modifications and Cell Differentiation in Cancer Pasquale Saggese 1, Assunta Sellitto 2 , Cesar A. Martinez 1, Giorgio Giurato 2 , Giovanni Nassa 2 , Francesca Rizzo 2 , Roberta Tarallo 2 and Claudio Scafoglio 1,* 1 Division of Pulmonary and Critical Care Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095, USA; [email protected] (P.S.); [email protected] (C.A.M.) 2 Laboratory of Molecular Medicine and Genomics, Department of Medicine, Surgery and Dentistry ‘Scuola Medica Salernitana’, University of Salerno, 84081 Baronissi (SA), Italy; [email protected] (A.S.); [email protected] (G.G.); [email protected] (G.N.); [email protected] (F.R.); [email protected] (R.T.) * Correspondence: [email protected]; Tel.: +1-310-825-9577 Received: 20 October 2020; Accepted: 11 December 2020; Published: 16 December 2020 Simple Summary: Cancer cells change their metabolism to support a chaotic and uncontrolled growth. In addition to meeting the metabolic needs of the cell, these changes in metabolism also affect the patterns of gene activation, changing the identity of cancer cells. As a consequence, cancer cells become more aggressive and more resistant to treatments. In this article, we present a review of the literature on the interactions between metabolism and cell identity, and we explore the mechanisms by which metabolic changes affect gene regulation. This is important because recent therapies under active investigation target both metabolism and gene regulation. The interactions of these new therapies with existing chemotherapies are not known and need to be investigated. -
Global Profiling of Metabolic Adaptation to Hypoxic Stress in Human Glioblastoma Cells
Global profiling of metabolic adaptation to hypoxic stress in human glioblastoma cells. Kucharzewska, Paulina; Christianson, Helena; Belting, Mattias Published in: PLoS ONE DOI: 10.1371/journal.pone.0116740 2015 Link to publication Citation for published version (APA): Kucharzewska, P., Christianson, H., & Belting, M. (2015). Global profiling of metabolic adaptation to hypoxic stress in human glioblastoma cells. PLoS ONE, 10(1), [e0116740]. https://doi.org/10.1371/journal.pone.0116740 Total number of authors: 3 General rights Unless other specific re-use rights are stated the following general rights apply: Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal Read more about Creative commons licenses: https://creativecommons.org/licenses/ Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. LUND UNIVERSITY PO Box 117 221 00 Lund +46 46-222 00 00 Download date: 07. Oct. 2021 RESEARCH ARTICLE Global Profiling of Metabolic Adaptation to Hypoxic Stress in Human Glioblastoma Cells Paulina Kucharzewska1, Helena C.