Pathogens Compromise Reproduction and Induce Melanization in Caribbean Sea Fans
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Coral Diversity and Disease in Mexico
DISEASES OF AQUATIC ORGANISMS Vol. 69: 23–31, 2006 Published March 23 Dis Aquat Org Coral diversity and disease in Mexico J. R. Ward1,*, K. L. Rypien1, J. F. Bruno2, C. D. Harvell1, E. Jordán-Dahlgren3, K. M. Mullen4, R. E. Rodríguez-Martínez3, J. Sánchez5, G. Smith6 1Department of Ecology and Evolutionary Biology, Corson Hall, Cornell University, Ithaca, New York 14853, USA 2Department of Marine Sciences, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3300, USA 3Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Apdo. Postal 1152, Cancún, 77500, Quintana Roo, Mexico 4Department of Entomology, Comstock Hall, Cornell University, Ithaca, New York 14853, USA 5Departamento de Ciencias Biológicas, Universidad de los Andes, Carrera 1E No 18A-10, Bogotá, Colombia 6Department of Biology and Geology, 471 University Parkway, Aiken, South Carolina 29801, USA ABSTRACT: Field studies and empirical tests of the ‘diversity-disease hypothesis’ demonstrate the effects of species richness on disease transmission and severity in plant systems. Yet the converse, i.e. effects of disease on diversity, is rarely considered in either relatively well-studied plant systems or marine ecosystems. We investigated these effects along the Mexican Yucatan Peninsula to (1) quan- tify the relationship between disease prevalence and coral diversity, (2) test the hypothesis that octo- coral and scleractinian disease prevalence are associated with one another, and (3) establish a long- term dataset. Aspergillosis of sea fans and 6 scleractinian diseases were documented. Prevalence of aspergillosis declined from 12.85% in 2002 to 5.26% in 2004, while prevalence of scleractinian dis- eases remained relatively constant at 5.7 ± 0.8% in 2002 and 7.96 ± 0.7% in 2004. -
CORAL REEF COMMUNITIES from NATURAL RESERVES in PUERTO RICO : a Quantitative Baseline Assessment for Prospective Monitoring Programs
Final Report CORAL REEF COMMUNITIES FROM NATURAL RESERVES IN PUERTO RICO : a quantitative baseline assessment for prospective monitoring programs Volume 2 : Cabo Rojo, La Parguera, Isla Desecheo, Isla de Mona by : Jorge (Reni) García-Sais Roberto L. Castro Jorge Sabater Clavell Milton Carlo Reef Surveys P. O. Box 3015, Lajas, P. R. 00667 [email protected] Final report submitted to the U. S. Coral Reef Initiative (CRI-NOAA) and DNER August, 2001 i PREFACE A baseline quantitative assessment of coral reef communities in Natural Reserves is one of the priorities of the U. S. Coral Reef Initiative Program (NOAA) for Puerto Rico. This work is intended to serve as the framework of a prospective research program in which the ecological health of these valuable marine ecosystems can be monitored. An expanded and more specialized research program should progressively construct a far more comprehensive characterization of the reef communities than what this initial work provides. It is intended that the better understanding of reef communities and the available scientific data made available through this research can be applied towards management programs designed at the protection of coral reefs and associated fisheries in Puerto Rico and the Caribbean. More likely, this is not going to happen without a bold public awareness program running parallel to the basic scientific effort. Thus, the content of this document is simplified enough as to allow application into public outreach and education programs. This is the second of three volumes providing quantitative baseline characterizations of coral reefs from Natural Reserves in Puerto Rico. ACKNOWLEDGEMENTS The authors want to express their sincere gratitude to Mrs. -
A Mass Mortality of <I>Gorgonia Ventalina</I>
BULLETIN OF MARINE SCIENCE, 50(3): 522-526. 1992 A MASS MORTALITY OF GORGONIA VENT ALINA (CNIDARIA: GORGONIIDAE) IN THE SANTA MARTA AREA, CARIBBEAN COAST OF COLOMBIA Jaime Garzon-Ferreira and Sven Zea The steep, rocky shores of the Santa Marta area (including the Tayrona Natural Park) in the Colombian Caribbean (11012'N and 74°14'W to 11°18'N and 73°54'W) comprise more than 90 km of irregular shoreline (Fig. 1). Hard substrata continue below the sea surface usually down to a maximum depth of 30 m, supporting rich communities of reef associated organisms (Garzon-Ferreira and Cano, 1990). Gorgonaceans are common and can dominate the sessile biocoenosis at some sites. The sea fan, Gorgonia ventalina Linnaeus (Cnidaria, Gorgoniidae), was known as one of the most conspicuous and abundant of the 39 living species of gorgonaceans in the area (Botero, 1987a, 1987b; pers. observ.). In September 1988, one of us (J.G.-F.) started to dive intensively in the area to map marine communities, and noted the absence of live individuals of sea fans. By the end of 1990, J.G.-F. had surveyed most of the coast to a depth of 20-30 m, and was able to recognize the dramatic mortality suffered by sea fans around Santa Marta. This note documents this mass mortality, compares it with other similar events and discusses its possible date of occurrence and causes. There are a few reports of octocoral mass mortalities in the tropical western Atlantic, all of which involved mainly sea fans and occurred along the southern Caribbean during the 1980's (Fig. -
Microbiomes of Gall-Inducing Copepod Crustaceans from the Corals Stylophora Pistillata (Scleractinia) and Gorgonia Ventalina
www.nature.com/scientificreports OPEN Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata Received: 26 February 2018 Accepted: 18 July 2018 (Scleractinia) and Gorgonia Published: xx xx xxxx ventalina (Alcyonacea) Pavel V. Shelyakin1,2, Sofya K. Garushyants1,3, Mikhail A. Nikitin4, Sofya V. Mudrova5, Michael Berumen 5, Arjen G. C. L. Speksnijder6, Bert W. Hoeksema6, Diego Fontaneto7, Mikhail S. Gelfand1,3,4,8 & Viatcheslav N. Ivanenko 6,9 Corals harbor complex and diverse microbial communities that strongly impact host ftness and resistance to diseases, but these microbes themselves can be infuenced by stresses, like those caused by the presence of macroscopic symbionts. In addition to directly infuencing the host, symbionts may transmit pathogenic microbial communities. We analyzed two coral gall-forming copepod systems by using 16S rRNA gene metagenomic sequencing: (1) the sea fan Gorgonia ventalina with copepods of the genus Sphaerippe from the Caribbean and (2) the scleractinian coral Stylophora pistillata with copepods of the genus Spaniomolgus from the Saudi Arabian part of the Red Sea. We show that bacterial communities in these two systems were substantially diferent with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria more prevalent in samples from Gorgonia ventalina, and Gammaproteobacteria in Stylophora pistillata. In Stylophora pistillata, normal coral microbiomes were enriched with the common coral symbiont Endozoicomonas and some unclassifed bacteria, while copepod and gall-tissue microbiomes were highly enriched with the family ME2 (Oceanospirillales) or Rhodobacteraceae. In Gorgonia ventalina, no bacterial group had signifcantly diferent prevalence in the normal coral tissues, copepods, and injured tissues. The total microbiome composition of polyps injured by copepods was diferent. -
Immune Response of the Caribbean Sea Fan, Gorgonia Ventalina, Exposed to an Aplanochytrium Parasite As Revealed by Transcriptome Sequencing
ORIGINAL RESEARCH ARTICLE published: 25 July 2013 doi: 10.3389/fphys.2013.00180 Immune response of the Caribbean sea fan, Gorgonia ventalina, exposed to an Aplanochytrium parasite as revealed by transcriptome sequencing Colleen A. Burge 1*, Morgan E. Mouchka 1,C.DrewHarvell1 and Steven Roberts 2 1 Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA 2 School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA, USA Edited by: Coral reef communities are undergoing marked declines due to a variety of stressors Sassan Asgari, The University of including disease. The sea fan coral, Gorgonia ventalina, is a tractable study system Queensland, Australia to investigate mechanisms of immunity to a naturally occurring pathogen. Functional Reviewed by: studies in Gorgonia ventalina immunity indicate that several key pathways and cellular David A. Raftos, Macquarie University, Australia components are involved in response to natural microbial invaders, although to date Sandie M. Degnan, The University the functional and regulatory pathways remain largely un-described. This study used of Queensland, Australia short-read sequencing (Illumina GAIIx) to identify genes involved in the response of G. *Correspondence: ventalina to a naturally occurring Aplanochytrium spp. parasite. De novo assembly of Colleen A. Burge, Department of the G. ventalina transcriptome yielded 90,230 contigs of which 40,142 were annotated. Ecology and Evolutionary Biology, Cornell University, E343 Corson RNA-Seq analysis revealed 210 differentially expressed genes in sea fans exposed to Hall, Ithaca, NY 14853, USA the Aplanochytrium parasite. Differentially expressed genes involved in immunity include e-mail: [email protected] pattern recognition molecules, anti-microbial peptides, and genes involved in wound repair and reactive oxygen species formation. -
Final Report for Florida Middle Ground Project
Final Report for Florida Middle Ground Project NOAA Coral Award NA05NMF4411045 CY 2005 Coral Project for the period 10/1/05 through 3/31/07 April 22, 2007 Lead PI: David F. Naar Associate Professor College of Marine Science University of South Florida 140 Seventh Avenue South Saint Petersburg, Florida 33701-5016 USA Voice: (727) 553 1637 Cell: (727) 510 9806 Fax: (727) 553 1189 Email: [email protected] Co-PIs: David Mallinson (East Carolina University) Felicia Coleman (FSU) GENERAL OBJECTIVES/LOGISTICS AND SUMMARY OF PROGRESS: We have completed mapping the entire Florida Middle Ground HAPC (Habitat Area of Particular Concern) using a high-resolution 300 kHz multibeam bathymetry and backscatter system (Figures 1-3) . The survey augmented the existing coverage in the area from previous USF cruises. The main scientific objectives of the cruise are to define the fish habitat areas within the Florida Middle Ground HAPC using multibeam bathymetry, multibeam backscatter, and ground truth data (previous and new sediment grab samples and previous video samples). Second, to eventually produce a Habitat Map that defines area of Sediment, rock, and coral reef. Third, to provide a map of the paleoshoreline during a previous glacial period, when sea level was lower. The first objective has been completed and the data DVD’s have been sent to the Gulf of Mexico Fisheries Management Council in March 2007. Drs. Mallinson and Naar have coauthored one paper presented at the international American Geophysical Union Meeting in 2006 (Mallinson et al., 2006) and have another paper submitted to a special volume (Hine et al., 2007) and have a third and final paper summarizing all our work at the Florida Middle Grounds in preparation (Mallinson et al., 2007). -
Rangewide Population Genetic Structure of the Caribbean Sea Fan
Molecular Ecology (2013) 22, 56–73 doi: 10.1111/mec.12104 Range-wide population genetic structure of the Caribbean sea fan coral, Gorgonia ventalina JASON P. ANDRAS,* KRYSTAL L. RYPIEN† and CATHERINE D. HARVELL Department of Ecology and Evolutionary Biology, Cornell University, Dale R. Corson Hall, Ithaca, NY 14853, USA Abstract The population structure of benthic marine organisms is of central relevance to the conservation and management of these often threatened species, as well as to the accurate understanding of their ecological and evolutionary dynamics. A growing body of evidence suggests that marine populations can be structured over short dis- tances despite theoretically high dispersal potential. Yet the proposed mechanisms governing this structure vary, and existing empirical population genetic evidence is of insufficient taxonomic and geographic scope to allow for strong general inferences. Here, we describe the range-wide population genetic structure of an ecologically important Caribbean octocoral, Gorgonia ventalina. Genetic differentiation was posi- tively correlated with geographic distance and negatively correlated with oceanograph- ically modelled dispersal probability throughout the range. Although we observed admixture across hundreds of kilometres, estimated dispersal was low, and popula- tions were differentiated across distances <2 km. These results suggest that popula- tions of G. ventalina may be evolutionarily coupled via gene flow but are largely demographically independent. Observed patterns of differentiation corroborate biogeographic breaks found in other taxa (e.g. an east/west divide near Puerto Rico), and also identify population divides not discussed in previous studies (e.g. the Yucatan Channel). High genotypic diversity and absence of clonemates indicate that sex is the primary reproductive mode for G. -
Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans
biology Review Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans Maria Giovanna Parisi 1,* , Daniela Parrinello 1, Loredana Stabili 2 and Matteo Cammarata 1,* 1 Department of Earth and Marine Sciences, University of Palermo, 90128 Palermo, Italy; [email protected] 2 Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy; [email protected] * Correspondence: [email protected] (M.G.P.); [email protected] (M.C.) Received: 10 August 2020; Accepted: 4 September 2020; Published: 11 September 2020 Abstract: Anthozoa is the most specious class of the phylum Cnidaria that is phylogenetically basal within the Metazoa. It is an interesting group for studying the evolution of mutualisms and immunity, for despite their morphological simplicity, Anthozoans are unexpectedly immunologically complex, with large genomes and gene families similar to those of the Bilateria. Evidence indicates that the Anthozoan innate immune system is not only involved in the disruption of harmful microorganisms, but is also crucial in structuring tissue-associated microbial communities that are essential components of the cnidarian holobiont and useful to the animal’s health for several functions including metabolism, immune defense, development, and behavior. Here, we report on the current state of the art of Anthozoan immunity. Like other invertebrates, Anthozoans possess immune mechanisms based on self/non-self-recognition. Although lacking adaptive immunity, they use a diverse repertoire of immune receptor signaling pathways (PRRs) to recognize a broad array of conserved microorganism-associated molecular patterns (MAMP). The intracellular signaling cascades lead to gene transcription up to endpoints of release of molecules that kill the pathogens, defend the self by maintaining homeostasis, and modulate the wound repair process. -
Spatial and Temporal Trends of Southeastern Florida's Octocoral Comunity
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 12-6-2019 Spatial and Temporal Trends of Southeastern Florida's Octocoral Comunity Alexandra Hiley Nova Southeastern University Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Alexandra Hiley. 2019. Spatial and Temporal Trends of Southeastern Florida's Octocoral Comunity. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, . (522) https://nsuworks.nova.edu/occ_stuetd/522. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Thesis of Alexandra Hiley Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science M.S. Marine Biology Nova Southeastern University Halmos College of Natural Sciences and Oceanography December 2019 Approved: Thesis Committee Major Professor: David Gilliam, Ph.D. Committee Member: Rosanna Milligan, Ph.D. Committee Member: Charles Messing, Ph.D. This thesis is available at NSUWorks: https://nsuworks.nova.edu/occ_stuetd/522 Spatial and temporal trends in Southeastern Florida’s octocoral community By Alexandra Hiley Submitted to the Faculty of Halmos College of Natural Sciences and Oceanography in partial fulfillment of the requirements for the degree of Master of Science with a specialty in: Marine Biology Nova Southeastern University Halmos College of Natural Science and Oceanography Committee Members: David Gilliam, Ph.D. Charles Messing, Ph.D. -
Hydrozoa, Coelenterata
Bijdragen lot de Dierkunde, 54 (2): 243-262—1984 Taxonomic characters in Caribbean Millepora species (Hydrozoa, Coelenterata) by Walentina H. de Weerdt Institute of Taxonomie Zoology, University of Amsterdam, P. 0. Box 20125, 1000 HC Amsterdam, The Netherlands Summary size of the and gastropores dactylopores, pore density and structure of the ampullae, have In order to find characters in Millepora species with a been studied in the or were higher diagnostic value than the growth form (on which hardly past con- sidered useless because species delimitation is hitherto based) a comparison is of high intraspecific made of the surface structure, microstructure of the variation 1948 1949 (Boschma, a & b, a, 1950, skeleton, structure of the ampullae coverings, size of the 1964; Martinez Estalella, 1982). In some Atlan- and and in gastropores dactylopores, pore density tic the form of the species, however, growth cor- specimens of the four species occurring in the Caribbean allum is which often im- M. M. and variable, region: Millepora alcicornis, complanata, squarrosa, extremely identification. This M. striata. While most characters are of little taxonomic pedes a good variability sizes and densities useful. The value, pore are surprisingly be the fact may partly explained by that species are diagnosed and some biogeographical remarks various Millepora has a high adaptability to en- are given. vironmental circumstances, like depth, water movement, current, and turbidity. Résumé In in a previous paper (De Weerdt, 1981), Afin de trouver dans les espèces de Millepora des caractères which I reviewed the taxonomie problems in de valeur caractè- diagnostique supérieure par rapport aux Millepora, the need to search for other characters res du habitus (sur lesquels la délimitation des espèces est is stressed. -
Reducing Host DNA Contamination in 16S Rrna Gene Surveys of Anthozoan Microbiomes Using PNA Clamps
Coral Reefs https://doi.org/10.1007/s00338-020-02006-5 REPORT Reducing host DNA contamination in 16S rRNA gene surveys of anthozoan microbiomes using PNA clamps 1 2 1 Alicia M. Reigel • Sarah M. Owens • Michael E. Hellberg Received: 30 March 2020 / Accepted: 27 September 2020 Ó The Author(s) 2020 Abstract Efforts to study the microbial communities increase in the abundance of rarer taxa. The clamp also associated with corals can be limited by inefficiencies in increased the average percentage of microbial reads in the sequencing process due to high levels of host amplifi- another gorgonian, G. ventalina, by 8.6-fold without cation by universal bacterial 16S rRNA gene primers. altering the microbial community beta diversity, and in a Here, we develop an inexpensive peptide nucleic acid distantly related scleractinian coral, P. panamensis, by (PNA) clamp that binds to a target sequence of host DNA nearly double. The reduction of host contamination corre- during PCR and blocks amplification. We then test the lated with the number of nucleotide mismatches between ability of this PNA clamp to mitigate host contamination the host amplicon and the PNA clamp. The PNA clamp and increase overall microbial sequence coverage on costs as little as $0.48 per sample, making it an efficient samples from three coral species: the gorgonians Eunicea and cost-effective solution to increase microbial sequence flexuosa and Gorgonia ventalina, and the scleractinian coverage for high-throughput sequencing of coral micro- Porites panamensis. The 20-bp PNA clamp was designed bial communities. using DNA from E. flexuosa. Adding the PNA clamp during PCR increased the percentage of microbial reads in Keywords Coral Microbial communities Host–microbe E. -
Dry Tortugas National Park - a SPAW Listed Site
eet Factsh The Protocol on Specially Protected Areas and Wildlife in the Wider Caribbean (SPAW): Dry Tortugas National Park - A SPAW listed site - Identification Country: USA Name of the area: Dry Tortugas National park Administrative region: Southeast United States Date of establishment: 10/26/1992 Contacts: Geographic location: Contact adress: P.O. Box 6208 Key West, FL 33041 Longitude X: -82.872813 Website: www.nps.gov/drto Latitude Y: 24.627874 Email address: [email protected] Date of listing under SPAW: 23 October 2012 Introduction The Dry Tortugas National Park (DTNP) protects a 265 sq. km. area and green sea turtles, sooty terns, frigate birds, and numerous of coral reefs, sandy shoals, seagrass beds and seven small islands migratory bird species.” The Park has four management zones to or keys. The marine area includes reefs with high densities of live achieve desired resource conditions and provide a range of com- coral cover and massive coral heads that are unique to the Tortu- patible visitor uses, including a Research Natural Area where gas region and rare in the Florida Keys. Rare migratory seabirds fishing and anchoring are prohibited to protect and restore coral utilize the keys for rookeries and sea turtles nest on the sand and fish species and to scientifically evaluate their condition. beaches. DTNP was established by the U.S. Congress: “to preserve and protect for the education, inspiration, and enjoyment of present and future generations nationally significant natural, his- toric, scenic, marine, and scientific