FGF Signalling Generates Ventral Telencephalic Cells Independently
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Interaction Network of Immune‑Associated Genes Affecting the Prognosis of Patients with Glioblastoma
EXPERIMENTAL AND THERAPEUTIC MEDICINE 21: 61, 2021 Interaction network of immune‑associated genes affecting the prognosis of patients with glioblastoma XIAOHONG HOU1*, JIALIN CHEN2*, QIANG ZHANG1, YINCHUN FAN1, CHENGMING XIANG1, GUIYIN ZHOU1, FANG CAO1 and SHENGTAO YAO1 1Department of Cerebrovascular Disease, Affiliated Hospital of Zunyi Medical University;2 Department of Neonatology, The First People' s Hospital of Zunyi Affiliated to Zunyi Medical University, Zunyi, Guizhou 563000, P.R. China Received October 15, 2019; Accepted October 6, 2020 DOI: 10.3892/etm.2020.9493 Abstract. Glioblastoma multiforme (GBM) is a common and immune genes of interest. The interaction network of malignant tumor type of the nervous system. The purpose immune‑regulatory genes constructed in the present study of the present study was to establish a regulatory network of enhances the current understanding of mechanisms associated immune‑associated genes affecting the prognosis of patients with poor prognosis of patients with GBM. The risk score with GBM. The GSE4290, GSE50161 and GSE2223 datasets model established in the present study may be used to evaluate from the Gene Expression Omnibus database were screened the prognosis of patients with GBM. to identify common differentially expressed genes (co‑DEGs). A functional enrichment analysis indicated that the co‑DEGs Introduction were mainly enriched in cell communication, regulation of enzyme activity, immune response, nervous system, cytokine Glioblastoma multiforme (GBM) is one of the most malig‑ signaling in immune system and the AKT signaling pathway. nant tumor types of the central nervous system, with short The co‑DEGs accumulated in immune response were then median survival and poor prognosis. -
Selective Estrogen Receptor Modulators: Discrimination of Agonistic Versus Antagonistic Activities by Gene Expression Profiling in Breast Cancer Cells
[CANCER RESEARCH 64, 1522–1533, February 15, 2004] Selective Estrogen Receptor Modulators: Discrimination of Agonistic versus Antagonistic Activities by Gene Expression Profiling in Breast Cancer Cells Jonna Frasor,1 Fabio Stossi,1 Jeanne M. Danes,1 Barry Komm,2 C. Richard Lyttle,2 and Benita S. Katzenellenbogen1 1Department of Molecular and Integrative Physiology, University of Illinois and College of Medicine, Urbana, Illinois, and 2Women’s Health Research Institute, Wyeth Research, Collegeville, Pennsylvania ABSTRACT tures in these women; however, some detrimental side effects such as an increased risk of endometrial cancer, stroke, and pulmonary embolism Selective estrogen receptor modulators (SERMs) such as tamoxifen are were also associated with tamoxifen treatment (7). Ral was examined in effective in the treatment of many estrogen receptor-positive breast cancers the Multiple Outcomes of Raloxifene Evaluation trial and found to be and have also proven to be effective in the prevention of breast cancer in women at high risk for the disease. The comparative abilities of tamoxifen effective in reducing the incidence of osteoporosis in postmenopausal versus raloxifene in breast cancer prevention are currently being compared in women, as well as the incidence of breast cancer but, unlike tamoxifen, the Study of Tamoxifen and Raloxifene trial. To better understand the actions without the increased risk of endometrial cancer (8, 9). On the basis of the of these compounds in breast cancer, we have examined their effects on the positive outcome of these trials, the Study of Tamoxifen and Raloxifene expression of ϳ12,000 genes, using Affymetrix GeneChip microarrays, with trial was begun in 1999 to directly compare the effects of these two quantitative PCR verification in many cases, categorizing their actions as SERMs, tamoxifen and Ral, in prevention of breast cancer (10, 11). -
Non-Canonical Activation of Hedgehog in Prostate Cancer Cells Mediated by the Interaction of Transcriptionally Active Androgen Receptor Proteins with Gli3
Oncogene (2018) 37:2313–2325 https://doi.org/10.1038/s41388-017-0098-7 ARTICLE Non-canonical activation of hedgehog in prostate cancer cells mediated by the interaction of transcriptionally active androgen receptor proteins with Gli3 1 1,2 2 1 1 1 2,3 Na Li ● Sarah Truong ● Mannan Nouri ● Jackson Moore ● Nader Al Nakouzi ● Amy Anne Lubik ● Ralph Buttyan Received: 19 July 2017 / Revised: 18 October 2017 / Accepted: 29 November 2017 / Published online: 12 February 2018 © The Author(s) 2018. This article is published with open access Abstract Hedgehog (Hh) is an oncogenic signaling pathway that regulates the activity of Gli transcription factors. Canonical Hh is a Smoothened-(Smo-) driven process that alters the post-translational processing of Gli2/Gli3 proteins. Though evidence supports a role for Gli action in prostate cancer (PCa) cell growth and progression, there is little indication that Smo is involved. Here we describe a non-canonical means for activation of Gli transcription in PCa cells mediated by the binding of transcriptionally-active androgen receptors (ARs) to Gli3. Androgens stimulated reporter expression from a Gli-dependent promoter in a variety of AR + PCa cells and this activity was suppressed by an anti-androgen, Enz, or by AR knockdown. 1234567890();,: Androgens also upregulated expression of endogenous Gli-dependent genes. This activity was associated with increased intranuclear binding of Gli3 to AR that was antagonized by Enz. Fine mapping of the AR binding domain on Gli2 showed that AR recognizes the Gli protein processing domain (PPD) in the C-terminus. Mutations in the arginine-/serine repeat elements of the Gli2 PPD involved in phosphorylation and ubiquitinylation blocked the binding to AR. -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
Characterisation of Keratan Sulfate Phosphoglycan
DIPLOMARBEIT Titel der Diplomarbeit Verification of Dscam expression in rat microglia angestrebter akademischer Grad Magister der Naturwissenschaften (Mag. rer.nat.) Verfasser: Roland Prielhofer Matrikel-Nummer: 0400857 Studienrichtung: A490 - Molekulare Biologie Betreuerin Univ.-Doz. Dr. Monika Bradl (Medizinische Universität Wien) Wien, August 2009 Table of contents: Abstract Zusammenfassung 1. Introduction ........................................................................................................ - 1 - 2. Material and Methods ..................................................................................... - 7 - 2.1. Cell biology ................................................................................................... - 7 - 2.1.1. Media ............................................................................................................. - 7 - 2.1.2. Model organisms ........................................................................................... - 8 - 2.1.3. Preparation of primary mixed glial cell cultures ........................................... - 8 - 2.1.4. BD PuraMatrix™ peptide hydrogel .............................................................. - 9 - 2.1.5. Isolation of microglia from adult lewis rat spinal cords ................................ - 10 - 2.1.6. Lymphocyte isolation .................................................................................... - 11 - 2.1.7. Phase-contrast microscopy and imaging ....................................................... - 11 - -
Prox1regulates the Subtype-Specific Development of Caudal Ganglionic
The Journal of Neuroscience, September 16, 2015 • 35(37):12869–12889 • 12869 Development/Plasticity/Repair Prox1 Regulates the Subtype-Specific Development of Caudal Ganglionic Eminence-Derived GABAergic Cortical Interneurons X Goichi Miyoshi,1 Allison Young,1 Timothy Petros,1 Theofanis Karayannis,1 Melissa McKenzie Chang,1 Alfonso Lavado,2 Tomohiko Iwano,3 Miho Nakajima,4 Hiroki Taniguchi,5 Z. Josh Huang,5 XNathaniel Heintz,4 Guillermo Oliver,2 Fumio Matsuzaki,3 Robert P. Machold,1 and Gord Fishell1 1Department of Neuroscience and Physiology, NYU Neuroscience Institute, Smilow Research Center, New York University School of Medicine, New York, New York 10016, 2Department of Genetics & Tumor Cell Biology, St. Jude Children’s Research Hospital, Memphis, Tennessee 38105, 3Laboratory for Cell Asymmetry, RIKEN Center for Developmental Biology, Kobe 650-0047, Japan, 4Laboratory of Molecular Biology, Howard Hughes Medical Institute, GENSAT Project, The Rockefeller University, New York, New York 10065, and 5Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724 Neurogliaform (RELNϩ) and bipolar (VIPϩ) GABAergic interneurons of the mammalian cerebral cortex provide critical inhibition locally within the superficial layers. While these subtypes are known to originate from the embryonic caudal ganglionic eminence (CGE), the specific genetic programs that direct their positioning, maturation, and integration into the cortical network have not been eluci- dated. Here, we report that in mice expression of the transcription factor Prox1 is selectively maintained in postmitotic CGE-derived cortical interneuron precursors and that loss of Prox1 impairs the integration of these cells into superficial layers. Moreover, Prox1 differentially regulates the postnatal maturation of each specific subtype originating from the CGE (RELN, Calb2/VIP, and VIP). -
The Role of Gli3 in Inflammation
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Winter 2020 THE ROLE OF GLI3 IN INFLAMMATION Stephan Josef Matissek University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation Matissek, Stephan Josef, "THE ROLE OF GLI3 IN INFLAMMATION" (2020). Doctoral Dissertations. 2552. https://scholars.unh.edu/dissertation/2552 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. THE ROLE OF GLI3 IN INFLAMMATION BY STEPHAN JOSEF MATISSEK B.S. in Pharmaceutical Biotechnology, Biberach University of Applied Sciences, Germany, 2014 DISSERTATION Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy In Biochemistry December 2020 This dissertation was examined and approved in partial fulfillment of the requirement for the degree of Doctor of Philosophy in Biochemistry by: Dissertation Director, Sherine F. Elsawa, Associate Professor Linda S. Yasui, Associate Professor, Northern Illinois University Paul Tsang, Professor Xuanmao Chen, Assistant Professor Don Wojchowski, Professor On October 14th, 2020 ii ACKNOWLEDGEMENTS First, I want to express my absolute gratitude to my advisor Dr. Sherine Elsawa. Without her help, incredible scientific knowledge and amazing guidance I would not have been able to achieve what I did. It was her encouragement and believe in me that made me overcome any scientific struggles and strengthened my self-esteem as a human being and as a scientist. -
GLI3 Knockdown Decreases Stemness, Cell Proliferation and Invasion in Oral Squamous Cell Carcinoma
2458 INTERNATIONAL JOURNAL OF ONCOLOGY 53: 2458-2472, 2018 GLI3 knockdown decreases stemness, cell proliferation and invasion in oral squamous cell carcinoma MARIA FERNANDA SETÚBAL DESTRO RODRIGUES1,2, LUCYENE MIGUITA2, NATHÁLIA PAIVA DE ANDRADE2, DANIELE HEGUEDUSCH2, CAMILA OLIVEIRA RODINI3, RAQUEL AJUB MOYSES4, TATIANA NATASHA TOPORCOV5, RICARDO RIBEIRO GAMA6, ELOIZA ELENA TAJARA7 and FABIO DAUMAS NUNES2 1Postgraduate Program in Biophotonics Applied to Health Sciences, Nove de Julho University (UNINOVE), São Paulo 01504000; 2Department of Oral Pathology, School of Dentistry, University of São Paulo, São Paulo 05508000; 3Department of Biological Sciences, Bauru School of Dentistry, Bauru 17012901; 4Department of Head and Neck Surgery, School of Medicine, 5School of Public Health, University of São Paulo, São Paulo 03178200; 6Department of Head and Neck Surgery, Barretos Cancer Hospital, Barretos 014784400; 7Department of Molecular Biology, School of Medicine of São José do Rio Preto, São José do Rio Preto 15090000, Brazil Received February 28, 2018; Accepted June 29, 2018 DOI: 10.3892/ijo.2018.4572 Abstract. Oral squamous cell carcinoma (OSCC) is an expression of the Involucrin (IVL) and S100A9 genes. Cellular extremely aggressive disease associated with a poor prognosis. proliferation and invasion were inhibited following GLI3 Previous studies have established that cancer stem cells (CSCs) knockdown. In OSCC samples, a high GLI3 expression was actively participate in OSCC development, progression and associated with tumour size but not with prognosis. On the resistance to conventional treatments. Furthermore, CSCs whole, the findings of this study demonstrate for the first time, frequently exhibit a deregulated expression of normal stem at least to the best of our knowledge, that GLI3 contributes cell signalling pathways, thereby acquiring their distinctive to OSCC stemness and malignant behaviour. -
Tamoxifen Resistance: Emerging Molecular Targets
International Journal of Molecular Sciences Review Tamoxifen Resistance: Emerging Molecular Targets Milena Rondón-Lagos 1,*,†, Victoria E. Villegas 2,3,*,†, Nelson Rangel 1,2,3, Magda Carolina Sánchez 2 and Peter G. Zaphiropoulos 4 1 Department of Medical Sciences, University of Turin, Turin 10126, Italy; [email protected] 2 Faculty of Natural Sciences and Mathematics, Universidad del Rosario, Bogotá 11001000, Colombia; [email protected] 3 Doctoral Program in Biomedical Sciences, Universidad del Rosario, Bogotá 11001000, Colombia 4 Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge 14183, Sweden; [email protected] * Correspondence: [email protected] (M.R.-L.); [email protected] (V.E.V.); Tel.: +39-01-1633-4127 (ext. 4388) (M.R.-L.); +57-1-297-0200 (ext. 4029) (V.E.V.); Fax: +39-01-1663-5267 (M.R.-L.); +57-1-297-0200 (V.E.V.) † These authors contributed equally to this work. Academic Editor: William Chi-shing Cho Received: 5 July 2016; Accepted: 16 August 2016; Published: 19 August 2016 Abstract: 17β-Estradiol (E2) plays a pivotal role in the development and progression of breast cancer. As a result, blockade of the E2 signal through either tamoxifen (TAM) or aromatase inhibitors is an important therapeutic strategy to treat or prevent estrogen receptor (ER) positive breast cancer. However, resistance to TAM is the major obstacle in endocrine therapy. This resistance occurs either de novo or is acquired after an initial beneficial response. The underlying mechanisms for TAM resistance are probably multifactorial and remain largely unknown. Considering that breast cancer is a very heterogeneous disease and patients respond differently to treatment, the molecular analysis of TAM’s biological activity could provide the necessary framework to understand the complex effects of this drug in target cells. -
GLI2 but Not GLI1/GLI3 Plays a Central Role in the Induction of Malignant Phenotype of Gallbladder Cancer
ONCOLOGY REPORTS 45: 997-1010, 2021 GLI2 but not GLI1/GLI3 plays a central role in the induction of malignant phenotype of gallbladder cancer SHU ICHIMIYA1, HIDEYA ONISHI1, SHINJIRO NAGAO1, SATOKO KOGA1, KUKIKO SAKIHAMA2, KAZUNORI NAKAYAMA1, AKIKO FUJIMURA3, YASUHIRO OYAMA4, AKIRA IMAIZUMI1, YOSHINAO ODA2 and MASAFUMI NAKAMURA4 Departments of 1Cancer Therapy and Research, 2Anatomical Pathology, 3Otorhinolaryngology and 4Surgery and Oncology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812‑8582, Japan Received August 10, 2020; Accepted December 7, 2020 DOI: 10.3892/or.2021.7947 Abstract. We previously reported that Hedgehog (Hh) signal Introduction was enhanced in gallbladder cancer (GBC) and was involved in the induction of malignant phenotype of GBC. In recent Gallbladder cancer (GBC) is the seventh most common gastro- years, therapeutics that target Hh signaling have focused on intestinal carcinoma and accounts for 1.2% of all cancer cases molecules downstream of smoothened (SMO). The three tran- and 1.7% of all cancer-related deaths (1). GBC develops from scription factors in the Hh signal pathway, glioma-associated metaplasia to dysplasia to carcinoma in situ and then to invasive oncogene homolog 1 (GLI1), GLI2, and GLI3, function down- carcinoma over 5‑15 years (2). During this time, GBC exhibits stream of SMO, but their biological role in GBC remains few characteristic symptoms, and numerous cases have already unclear. In the present study, the biological significance of developed into locally advanced or metastasized cancer by the GLI1, GLI2, and GLI3 were analyzed with the aim of devel- time of diagnosis. Gemcitabine (GEM), cisplatin (CDDP), and oping novel treatments for GBC. -
What You Can Learn from One Gene: GLI3 L G Biesecker
465 REVIEW J Med Genet: first published as 10.1136/jmg.2004.029181 on 1 June 2006. Downloaded from What you can learn from one gene: GLI3 L G Biesecker ............................................................................................................................... J Med Genet 2006;43:465–469. doi: 10.1136/jmg.2004.029181 The study of patients with rare multiple congenital anomaly several genes that cause abnormal phenotypes in the human when mutated (for example, SHH, syndromes can provide illuminating insights into normal PTC1, and CBP).7 development and the pathogenesis of congenital The understanding of the pathogenesis of GLI3 anomalies. The GLI3 gene is a particularly good example was markedly facilitated by analyses of model organisms and comparing the model organism as it illuminates the phenomena of pleiotropy, data with the human data. The bifunctional phenocopies, syndrome families, and evolutionary nature of GLI3 was a hypothesis based on two conservation of pathogenesis, and raises questions about observations: the biological function of cubitus interruptus (ci, the homologue of the GLI gene how diagnoses are conceptualised. These topics are family in Drosophila) and the position of trunca- reviewed in turn, in the context of the clinical and biological tion mutations in GLI3 in humans. The key data derived from patients with mutations in GLI3 and biological insight was made by the Kornberg group, when they showed that ci, which nor- experimental work in model systems. mally localises to the cytoplasm, is under -
Mir-506 Acts As a Tumor Suppressor by Directly Targeting the Hedgehog Pathway Transcription Factor Gli3 in Human Cervical Cancer
Oncogene (2015) 34, 717–725 © 2015 Macmillan Publishers Limited All rights reserved 0950-9232/15 www.nature.com/onc ORIGINAL ARTICLE miR-506 acts as a tumor suppressor by directly targeting the hedgehog pathway transcription factor Gli3 in human cervical cancer S-Y Wen1,2,3,8, Y Lin2,8, Y-Q Yu4, S-J Cao5, R Zhang6, X-M Yang3,JLi3, Y-L Zhang3, Y-H Wang3, M-Z Ma3, W-W Sun5, X-L Lou5, J-H Wang7, Y-C Teng1 and Z-G Zhang3 Although significant advances have recently been made in the diagnosis and treatment of cervical carcinoma, the long-term survival rate for advanced cervical cancer remains low. Therefore, an urgent need exists to both uncover the molecular mechanisms and identify potential therapeutic targets for the treatment of cervical cancer. MicroRNAs (miRNAs) have important roles in cancer progression and could be used as either potential therapeutic agents or targets. miR-506 is a component of an X chromosome- linked miRNA cluster. The biological functions of miR-506 have not been well established. In this study, we found that miR-506 expression was downregulated in approximately 80% of the cervical cancer samples examined and inversely correlated with the expression of Ki-67, a marker of cell proliferation. Gain-of-function and loss-of-function studies in human cervical cancer, Caski and SiHa cells, demonstrated that miR-506 acts as a tumor suppressor by inhibiting cervical cancer growth in vitro and in vivo. Further studies showed that miR-506 induced cell cycle arrest at the G1/S transition, and enhanced apoptosis and chemosensitivity of cervical cancer cell.