Published OnlineFirst January 31, 2020; DOI: 10.1158/1078-0432.CCR-19-1625
CLINICAL CANCER RESEARCH | TRANSLATIONAL CANCER MECHANISMS AND THERAPY
Gefitinib and Afatinib Show Potential Efficacy for Fanconi Anemia–Related Head and Neck Cancer Helena Montanuy1, Agueda Martínez-Barriocanal2,3, Jose Antonio Casado4,5, Llorenc¸ Rovirosa1, Maria Jose Ramírez1,4,6, Rocío Nieto2, Carlos Carrascoso-Rubio4,5, Pau Riera6,7, Alan Gonzalez 8, Enrique Lerma7, Adriana Lasa4,6, Jordi Carreras-Puigvert9, Thomas Helleday9, Juan A. Bueren4,5, Diego Arango2,3, Jordi Minguillon 1,4,5, and Jordi Surralles 1,4,5
ABSTRACT ◥ Purpose: Fanconi anemia rare disease is characterized by bone two best candidates, gefitinib and afatinib, EGFR inhibitors marrow failure and a high predisposition to solid tumors, especially approved for non–small cell lung cancer (NSCLC), displayed head and neck squamous cell carcinoma (HNSCC). Patients with nontumor/tumor IC50 ratios of approximately 400 and approx- Fanconi anemia with HNSCC are not eligible for conventional imately 100 times, respectively. Neither gefitinib nor afatinib therapies due to high toxicity in healthy cells, predominantly activated the Fanconi anemia signaling pathway or induced hematotoxicity, and the only treatment currently available is sur- chromosomal fragility in Fanconi anemia cell lines. Importantly, gical resection. In this work, we searched and validated two already both drugs inhibited tumor growth in xenograft experiments in approved drugs as new potential therapies for HNSCC in patients immunodeficient mice using two Fanconi anemia patient– with Fanconi anemia. derived HNSCCs. Finally, in vivo toxicity studies in Fanca- Experimental Design: We conducted a high-content screening deficient mice showed that administration of gefitinib or afatinib of 3,802 drugs in a FANCA-deficient tumor cell line to identify was well-tolerated, displayed manageable side effects, no toxicity nongenotoxic drugs with cytotoxic/cytostatic activity. The best to bone marrow progenitors, and did not alter any hematologic candidates were further studied in vitro and in vivo for efficacy parameters. and safety. Conclusions: Our data present a complete preclinical analysis Results: Several FDA/European Medicines Agency (EMA)- and promising therapeutic line of the first FDA/EMA-approved approved anticancer drugs showed cancer-specificlethalityor anticancer drugs exerting cancer-specific toxicity for HNSCC in cell growth inhibition in Fanconi anemia HNSCC cell lines. The patients with Fanconi anemia.
Introduction treatment of solid malignancies are expected to further impact the Fanconi anemia is a rare genetic disease, caused by mutations in at survival and quality of life of these patients (5). While there are some least 22 genes, which encode for proteins involved in interstrand- studies on chemoprevention, with chronic treatment proposals such as crosslink DNA repair. Patients with Fanconi anemia suffer from bone quercetin or metformin (6, 7), few therapeutic options are available marrow failure, congenital abnormalities, and a high incidence of beyond surgical resection once solid malignancies appear (8, 9). The malignancies, such as solid tumors and leukemias (1, 2). The man- most frequent solid tumors, accounting for up to 50%, are HNSCC, agement of the hematologic phenotype has been remarkably improved with an incidence 700-fold higher than in the general population. over the last 20 years, thanks to optimized hematologic stem cell Patients can tolerate complex surgeries for oral tumor removal, but transplantation protocols, leading to an important increase in Fanconi usually receive mild chemotherapy, radiotherapy, or a combination, anemia patient survival, from less than 20 years of age in the 1990s to that yields moderate to high toxicities, with low survival rates of more than 30 years observed today (3, 4). The prevention and around 30 months (4, 8, 9).
1Department of Genetics and Microbiology. Universitat Autonoma de Barcelona, H. Montanuy, A. Martínez-Barriocanal, and J.A. Casado contributed equally to Barcelona, Spain. 2Group of Biomedical Research in Digestive Tract Tumors, this article. J. Minguillón and J. Surrallés contributed equally to this article. CIBBIM-Nanomedicine, Vall d'Hebron Research Institute (VHIR), Universitat Current address for J. Carreras-Puigvert: Division of Genome Biology, Science Autonoma de Barcelona, Barcelona, Spain. 3Group of Molecular Oncology, IRB for Life Laboratory, Department of Molecular Biochemistry and Biophysics, Lleida, Lleida, Spain. 4Centro de Investigacion Biomedica en Red de Enferme- Karolinska Institutet, Stockholm, Sweden; and current address for T. Helleday, dades Raras (CIBERER), Barcelona, Spain. 5Division of Hematopoietic Innovative Sheffield Cancer Center, Department of Oncology and Metabolism, University of Therapies, Centro de Investigaciones Energeticas Medioambientales y Tec- Sheffield, Sheffield, United Kingdom. nologicas (CIEMAT) and Advanced Therapies Unit, Instituto de Investigacion 6 Sanitaria Fundacion Jimenez Díaz (IIS-FJD/UAM), Madrid, Spain. Genetics Corresponding Authors: Jordi Surralles, Hospital de la Santa Creu i Sant Department and Biomedical Research Institute, Hospital de la Santa Creu i Sant Pau, C/Sant Quintí, 77, Barcelona 08041, Spain. Phone: 349-3553-7376; 7 Pau, Barcelona, Spain. Pharmacy Department, Hospital de la Santa Creu i Sant Fax: 349-3553-7287; E-mail: [email protected]; and Jordi Minguillon, 8 Pau, Barcelona, Spain. Department of Anatomic Pathology, Hospital de la Santa [email protected] Creu i Sant Pau, Barcelona, Spain. 9Division of Translational Medicine and Chemical Biology, Science for Life Laboratory, Department of Molecular Bio- Clin Cancer Res 2020;XX:XX–XX chemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden. doi: 10.1158/1078-0432.CCR-19-1625 Note: Supplementary data for this article are available at Clinical Cancer Research Online (http://clincancerres.aacrjournals.org/). 2020 American Association for Cancer Research.
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Survival assays Translational Relevance Seeded cells in 96-well plates were exposed to nine different con- Our work reports for the first time the repositioning of gefitinib centrations of MMC or antitumor drugs and cultured for 3 or 7 days. and afatinib, two anticancer EMA/FDA-approved drugs, to treat Cell growth and survival was measured with sulforhodamine B (SRB) head and neck squamous cell carcinoma (HNSCC) in Fanconi staining assay (12). IC50 was determined by calculating logarithmic anemia, a rare disease whose patients currently have surgical normalized trend lines with GraphPad. To identify best antitumor resection as their only therapeutic option. We screened existing candidates, we calculated a ratio from IC50 of nontumor cell lines fi drugs for antitumor activity and identi ed both candidates using a (primary fibroblasts) versus averaged IC50 of the averaged three combination of cell-based and in vivo mouse models. Our team Fanconi anemia HNSCC cell lines. recently obtained orphan drug designation (ODD) by EMA for gefitinib (EU/3/18/2075) and afatinib (EU/3/18/2110) (FDA ODD Western blot analysis pending), with the midterm goal to organize a multicenter, inter- Western blot analysis was performed as described previously (13). national clinical trial to prove that gefitinib/afatinib improve the FANCD2 (Ab2187), total ERK1 (Ab32537), phosphorylated ERK1/2 follow-up of these patients when diagnosed with HNSCC. (pT202/pY204 for ERK1, pT185/pY187 for ERK2; Ab50011), total AKT (Ab32505), and Vinculin (Ab18058) antibodies were from Abcam. Ser473 phosphorylated AKT (9271T), total EGFR (4267T), and Tyr1068 phosphorylated EGFR (3777T) antibodies were from Cell In this study, we searched for anticancer drugs approved by the Signaling Technology. FDA and/or European Medicines Agency (EMA) that could be repositioned to treat HNSCC in patients with Fanconi anemia Chromosome fragility and cell-cycle analysis thanks to the induction of cancer specificlethalityandidentified Chromosome fragility in cell lines was measured for 48 hours with several approved drugs (10, 11). The best drugs from this screening flow cytometric micronucleus (FCM) assay, as described earlier were thoroughly studied in vitro and in vivo, obtaining complete (14–16). Micronuclei (MN) frequency was expressed as the number fi – preclinical data and a solid basis to present the rst, nontoxic, and of MN per thousand nuclei. Percentage of cells arrested in G2 M phase potentially therapeutic option for patients with Fanconi anemia of the cell cycle was obtained from nuclei plots. For in vivo chromo- with HNSCC. some fragility in mice, genotoxicity was measured in erythrocytes and reticulocytes from peripheral blood of wild-type and Fanca-deficient mice as described previously (17). Briefly, peripheral blood was Materials and Methods drawn from mice tail ( 100 mL), collected into EDTA containing Cell lines and reagents tubes, fixed in methanol, and stored at 80 C. Samples were then Wild-type (PN) and FANCA-deficient (FA551) primary fibroblasts, incubated with anti-CD71-FITC antibody to select reticulocytes WT (VU040-T), FA-derived 1131 (VU1131-T2.8, FANCC / ), 1604 from erythrocytes, and stained with propidium iodide to detect (VU1604-T, FANCL / ), and 1365 (VU1365-T, FANCA / ) and micronuclei. FACS analysis was performed in a FACSCanto cytometer SCC25 and Detroit 562 HNSCC cell lines, were grown in DMEM (Becton Dickinson). (Biowest) supplemented with 10 % heat inactivated FBS and plasmocin (ant-mpt, Invivogen). WT- and FANCA-deficient lymphoblastoid cell Gene sequencing of HNSCC cell lines lines were grown in DMEM supplemented with 20% heat-inactivated To analyze mutations in cancer-related genes (including EGFR) FBS, sodium pyruvate (Gibco), nonessential amino acids (Gibco), in HNSCC cell lines, we used TruSight Tumor 15 (Illumina), a b-mercaptoethanol (Gibco), and plasmocin. HNSCCs were kindly next-generation sequencing panel designed to identify sequencing provided by Dr Josephine Dorsman, from VU University Medical variants in 15 genes commonly mutated in solid tumors and asso- Center (Amsterdam, the Netherlands). Non-Fanconi anemia HNSCC ciated with marketed therapeutics (AKT1, BRAF, EGFR, ERBB2, cell lines were from ATCC. Diepoxibutane (DEB, 202533), hydroxy- FOXL2, GNA11, GNAQ, KIT, KRAS, MET, NRAS, PDGFRA, urea (HU, H8627), and Mitomycin C (MMC, M0503) were purchased PIK3CA, RET and TP53). from Sigma. Drugs for in vitro studies, gefitinib (HY-508945), AEE788 (14816), afatinib (11492), AZD9291 (16237), ceritinib (19374), CO- In vivo xenograft experiments 1686 (16244), and vandetanib (14706) were from Cayman Chemical NOD-SCID mice (both sexes, age 6- to 9-week-old, Charles River) and cetuximab/Erbitux was from Merck. For in vivo studies, drugs were injected subcutaneously in the right flank with a mixture 1:1 of gefitinib/Iressa (AstraZeneca) and afatinib/Giotrif (Boehringer Ingel- 1 106 FA-HNSCC cells–Matrigel (Corning). Animals were moni- heim) were used, and vehicles Tween-80 (P4780), methylcellulose tored twice a week (body weight and tumor volume) until tumors were 4,000cP (M0512), and alpha-lactose (L3625) were from Sigma. approximately 150 mm3. Animals were then randomized into 4 experimental groups (n ¼ 8 animals/group): (i) vehicle (0.5% Screening validation Tween-80); (ii) gefitinib; (iii) vehicle (0.5% methylcellulose); (iv) A total of 3,800 drugs' high-content screening was described afatinib. Treatments were administered 5 days a week orally (gavage): previously (Montanuy and colleagues, submitted). For nongenotoxic gefitinib/Iressa 150 mg/kg and afatinib/Giotrif 20 mg/kg (18–21). candidate validation, Fanconi anemia primary fibroblasts and Fanconi Vehicles were further supplemented with lactose at 98 mg/kg and anemia HNSCC cell lines were seeded in 384-well plates, treated with 117 mg/kg, respectively, to pair excipients in the medicinal products. candidate drugs at 1 mmol/L concentration per duplicate and cultured Animals were monitored three times a week (body weight and tumor for 7 days. Cells were then fixed, Hoechst stained, and nuclei images volume) until tumors were approximately 1,000 mm3. Tumor volume taken with ImageXpress confocal microscope (Molecular Devices, was determined by using the formula: (length width2) (p/6). At representative images in Supplementary Fig. S1A). Nuclei in each endpoint animals were euthanized, and tumors were surgically well were counted with CellProfiler software. removed. Tumor specimens were formalin-fixed and paraffin-
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embedded for routine histologic analysis. Animal experiments were Results ’ performed under protocols approved by the Vall d Hebron Ethical EGFR inhibitors selectively inhibit the growth of Fanconi anemia Committee for Animal Experimentation and the appropriate govern- HNSCC cell lines mental agency and carried out in accordance with the approved From a previous screening in FANCA-deficient tumor cells guidelines. (Montanuy and colleagues, submitted) we sought to find nonge- notoxic drugs that induce cancer-specific cytotoxicity. We used IHC primary fibroblasts from FA donors as nontumor cells and three Tumor samples excised from mouse xenograft experiments different FA patient–derived HNSCC cell lines: 1131 (FANCC were fixed in 4% formalin. For IHC, NovoLink polymer detection deficient), 1604 (FANCL deficient), and 1365 (FANCA deficient; system (Novocastra Laboratories) was used. Anti-phopho-ERK1 ref. 24). From 150 selected candidates, validation analysis at a (pT202/pY204)/phospho-ERK2 (pT185/pY187) immunostaining concentration of 1 mmol/L identified seven anticancer drugs: (1:200 dilution) was carried out after heat-induced antigen retriev- ceritinib, an anaplastic lymphoma kinase (ALK) inhibitor, used al (4 minutes, pressure cooker) with 10 mmol/L citrate buffer pH to treat NSCLC (25); CO1686 (rociletinib), a second-generation 6.0, and then counterstained with hematoxylin and mounted. EGFR inhibitor; AZD9291 (osimertinib), a third-generation EGFR inhibitor approved for patients with EGFR T790M mutation– In vivo toxicity experiments in Fanca-deficient mice positive metastatic NSCLC (26); vandetanib, a multikinase inhib- Fanca-deficient mice were described previously (22). Wild-type itor including EGFR, VEGFR2 and RET, approved for thyroid and Fanca-deficient mice (female, age ranging from 8 to 20 weeks) cancer (27); AEE788, also a dual inhibitor of EGFR/ERBB2 and were weight randomized into 4 experimental groups and started to VEGFR2; gefitinib, a first-generation inhibitor of EGFR, also receive treatment (n ¼ 6 animals/group): (i) vehicle (Tween-80); approved to treat NSCLC (28); and afatinib, a second- (ii) gefitinib; (iii) vehicle (methylcellulose); (iv) afatinib. Treat- generation EGFR inhibitor, also used to treat NSCLC (Fig. 1A ments were administered 5 days a week orally (gavage): gefitinib and B; Supplementary Fig. S1A–S1F; ref. 29). Interestingly, other 150 mg/kg and afatinib 20 mg/kg, for 2 weeks. Animals were EGFR and VEGFR inhibitors, such as erlotinib and vatalanib, did monitored three times a week (body weight), and tail bled at 0 not have or had a low nontumor/tumor ratio in the cell lines tested, (pretreatment) and 14 days (endpoint) of treatment. At endpoint, probably due to different cell line sensitivities that these drugs may animals were euthanized and bone marrow from femurs extracted exert (data not shown). In this sense, cetuximab treatment, a highly for further analysis. specific EGFR-targeting antibody used to treat HNSCC in the FACS analysis of hematopoietic cell populations general population, among other malignancies (30) inhibited þ For counting LSK cells from bone marrow, we selected Lin (all growth in all Fanconi anemia HNSCC cell lines, while having no fi fi FITC-labeled: TER-119, from eBiosciences; B220, RA3-6B2 from effect in primary broblasts, showing speci c dependency of EGFR BioLegend; CD3, 145-2C11 from BD Biosciences; CD11b/Mac1, pathway for Fanconi anemia HNSCC growth (Supplementary þ M1/70 from BioLegend; GR1, RB6-8C5 from BioLegend), C-Kit Fig. S1G). Subsequent cytotoxicity assays with doses ranging from þ (C-Kit PE/Cy7, 2B8 from BioLegend), and Sca-1 (Sca-1 PE, E13- low nanomolar to micromolar concentrations showed, as expected, 161-7 from BD Biosciences) cells. For peripheral blood cells, that the DNA crosslink-inducer MMC was highly toxic both in the following antibodies were used: B220-FITC (RA3-6B2), GR1- FanconianemiaHNSCCcelllinesaswellasprimarycells,atless fi PE (RB6-8C5), CD4-BV711 (RM4-5), and CD11b/MAC1-AF647 than 1 nmol/L (Fig. 1C). In sharp contrast, ge tinib and afatinib (M1/70) were from BioLegend; CD3-PEvio770 (145-2C11) was were the drugs that best inhibited growth in all three HNSCC cell from Miltenyi Biotec; CD8-PECy5 (53–6-7) was from BD Bios- lines derived from patients with Fanconi anemia, while having a þ þ fi ciences. T lymphocyte (CD3 ), B lymphocytes (B220 ), and mye- much lower effect in primary Fanconi anemia broblasts (Fig. 1D fi loid cells (non-T, non-B cells) were gated in the region of live and E). Ge tinib produced a sensitivity ratio of nontumor versus þ leucocytes from FSC-A, SSC-A, and DAPI parameters. CD4 and tumor cell lines of 386 times, and afatinib 112 times, exerting its þ þ CD8 cells were quantified from CD3 cells. Myeloid cell sub- antitumor effect at a low nanomolar concentration (the IC50 for þ þ fi populations GR1 MAC1 (mainly neutrophils and other granulo- HNSCCs averaged 25.3 nmol/L for ge tinib and 10.8 nmol/L for þ fi cytes) and GR1 MAC1 (mainly monocytes, macrophages, and afatinib; see Fig. 1F). Other drugs with good antitumor pro le were dendritic cells; ref. 23) were quantified from CD3 B220 cells. AEE788 (with an average IC50 of 28.4 nmol/L), AZD9291 (IC50 64.2 nmol/L), and vandetanib (IC50 of 108.4 nmol/L). However, Blood hematology and bone marrow colony-forming unit when compared with primary fibroblasts, only AEE788 showed assays results similar to afatinib (nontumor versus tumor ratio of 81 Peripheral blood was drawn from mice tail ( 100 mL), collected into times). CO1686 (IC50 of 629.3 nmol/L) and ceritinib (IC50 of 1,246 EDTA containing tubes (Sarstedt) and counts were determined using nmol/L) showed modest differences between malignant and an Abacus Junior Vet hematology analyzer (Diatron). Number of healthy cells (ratios of 2.4 and 1.3 times, respectively; see Supple- colony-forming unit-granulocyte/macrophage (CFU-GM) progeni- mentary Fig. S1B–S1F). We performed the survival assays at 7 days tors present in total bone marrow was performed as described to better show long-term nontoxicity in primary fibroblasts; 3-day previously (22). treatments of gefitinib and afatinib also gave similar results (data not shown). We also confirmed gefitinib and afatinib inhib- Statistical analysis ited non-Fanconi anemia HNSCCs in a similar trend (Supple- All experiments were performed using triplicate repeats unless mentary Fig. S1H and data not shown). Thus, gefitinib and otherwise stated, and data present means SEM. Statistical sig- afatinib were the best anticancer drugs that specifically inhibited nificance was tested using Student t test, and P values were reported the growth of Fanconi anemia HNSCC cell lines at low nanomolar as , P < 0.05; , P < 0.01; , P < 0.001; and , P < 0.0001. concentrations.
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A FANCA-/- U2OS cells
Screening 150 Validation FA primary cells Nongenotoxic + drugs FA tumor cells
B FA primary fibroblasts FA HNSCC (1365) 120 FA HNSCC (1604) FA HNSCC (1131) 100
80
60
40 Cell growth (%) 20
0 DMSO Ceritinib AZD9291 CO-1686 AEE788 Gefitinib Vandetanib Afatinib
CDWT primary fibroblasts FA HNSCC (1365) FA primary fibroblasts FA HNSCC (1604) FA HNSCC (1131) ) 100% ) 100% (% 75% 75%
50% 50%
25% 25% Cell growth (% Cell growth
0% 0% 0.01 0.1 1 10 100 0.001 0.01 0.1 1 10 MMC (nmol/L) Gefitinib (µmol/L) EF IC50 (nmol/L) non tumoral/tumoral FA cell lines
100% Gefi nib Vandetanib CO1686 MMC Afa nib >>AZD9291 >Ceri nib 75% AEE788 9,779/25.3 50% 1,249/108.4 2,365/629.3 0.3/1.1 1,203/10.8 466/64.2 1,661/1,246 2,299/28.4 25% Cell growth (%) Ra o IC50 non tumoral/tumoral 0% 0.001 0.01 0.1 1 10 386 11.6 2.4 Afatinib (µmol/L) 0.2 112 > 7.3 > 1.3 81
Figure 1. Drug screening identified gefitinib and afatinib with antitumor activity in Fanconi anemia (FA)–derived HNSCCs, nontoxic for Fanconi anemia cells. A, FANCA- deficient U2OS cell line was used to screen for drugs with acute cytotoxicity. Nongenotoxic drugs with potential activity were selected and validated in Fanconi anemia HNSCCs and primary cells. B, Validation screening identified 7 potential drugs with high growth inhibition in three different Fanconi anemia HNSCCs while maintaining good viability in Fanconi anemia primary fibroblasts (at 1 mmol/L). Bars show mean of samples performed at least in duplicates. C–E, Extended cytotoxicity analysis with gefitinib (D) and afatinib (E) in primary fibroblasts (from wild-type, and FANCA-deficient patient) and three different Fanconi anemia
HNSCC cell lines. Mitomycin C (C) was used as a control. The mean SEM of at least three independent experiments is shown, with normalized curves in lines. F, IC50 (nmol/L) of the candidate drugs used, in Fanconi anemia fibroblasts (black) and Fanconi anemia HNSCC cell lines (averaged, gray). Ratio of nontumor versus tumor
IC50 (below) is shown to highlight best candidates (e.g., gefitinib, afatinib, and AEE788).
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Gefitinib and afatinib are nongenotoxic in FANCA-deficient activity and downstream signaling pathways, such as PI3K/AKT and cells the RAS/MAPK axis. Moreover, no genotoxic toxicity is reported from EGFR (ERBB-1) is a member of the ERBB family of tyrosine kinase these drugs. To discard any direct or indirect effect on DNA that could receptors that has a central role in the tumorigenesis of many types of be easily repaired by normal cells but compromise Fanconi anemia cell solid tumors, including HNSCC (31). Multiple drugs targeting these viability, we treated U2OS cells with gefitinib or afatinib to analyze receptors have been approved for the treatment of several cancers, such FANCD2 monoubiquitination, a central step in the Fanconi anemia/ as gefitinib and afatinib, as well as vandetanib and AZD9291 (26–29). BRCA pathway, induced by several types of DNA damage (2). As seen These drugs bind to the tyrosine kinase domain and impair kinase in Fig. 2A and B, neither gefitinib nor afatinib up to 10 mmol/L were
Figure 2. A Gefitinib (µmol/L) B Afatinib (µmol/L) Best candidates gefitinib and afatinib are NT HU 1 5 10 NT HU 1 5 10 D2-Ub D2-Ub nongenotoxic. A and B, U2OS cells were D2 D2 stimulated for 24 hours with different con- Vinculin Vinculin centrations of gefitinib (A), afatinib (B), or 2 mmol/L HU (as a positive control). Cells 100 100 were lysed and FANCD2 ubiquitination 75 analyzed by Western blot analysis (top) 75 with vinculin used as a loading control. 50 50 Averaged graphs of two independent 25 25 %Ub/Non-Ub experiments are shown in bottom panels. %Ub/Non-Ub 0 0 C, Chromosomal fragility analysis by flow NT HU 1 5 10 NT HU 1 5 10 cytometry micronucleus assay (see Mate- rials and Methods) using a Fanconi anemia Gefitinib (µmol/L) Afatinib (µmol/L) lymphoblastoid cell line. Graphs show rep- – resentative plots of MN (top) and G2 M cell C NT DEB Gefitinib (10 µmol/L) Afatinib (5 µmol/L) cycle (bottom). D–G, Graphs from experi- 5 5 5 5 ments performed as in C, with WT (gray 10 10 10 10 bars) or Fanconi anemia–derived (white 104 104 104 104 Nuclei Nuclei Nuclei 3 3 Nuclei 3 3 bars) lymphoblastoid cell lines. MN induc- MNs 10 97,8 10 92,3 10 97,8 10 98,3
FSC-A 2 FSC-A 2 FSC-A 2 FSC-A 2 tion (D and F) and G2–M cell-cycle arrest (E 10 MN 10 MN 10 MN 10 MN 1,57 6,38 1,65 1,24 and G) of cells with different concentra- 101 101 101 101 tions of gefitinib (D and E) and afatinib 100 100 100 100 100 101 102 103 104 105 100 101 102 103 104 105 100 101 102 103 104 105 100 101 102 103 104 105 (F and G). Diepoxybutane (DEB) was used V450-A V450-A V450-A V450-A as a positive control. Bars show mean 3.0K 2.0K G2/M 3.0K SEM of three independent experiments 37,1 3.0K with similar results. EGFR expression in 2.0K 1.5K G2/M G2/M G2/M 2.0K 11,3 12,6 2.0K 12,1 lymphoblastoid cell lines is shown in a G2−M 1.0K Count Count 1.0K Count Count Western blot inside graph from D and is 1.0K 1.0K 500 representative of two independent experiments. 0 0 0 0 100 101 102 103 104 105 100 101 102 103 104 105 100 101 102 103 104 105 100 101 102 103 104 105 V450-A V450-A V450-A V450-A
DE80 150 WT WT i FA FA 60 100 WT FA EGFR
arrest (%) 40 Vinculin
50 − M 2 20 G MN/1,000 nucle 0 0 NT DEB 1 5 10 NT DEB 1 5 10 Gefitinib (µmol/L) Gefitinib (µmol/L)
FG80 150 WT WT FA FA 60 100
arrest (%) 40
50 − M 2 20 G MN/1,000 nuclei 0 0 NT DEB 1 5 NT DEB 1 5 Afatinib (µmol/L) Afatinib (µmol/L)
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able to activate the Fanconi anemia/BRCA pathway as measured by growth of the tumors compared with control animals at the end of the FANCD2 monoubiquitination by Western blot analysis, indicating experiment (Figs. 4A–C and E and 5A–C and E), or a significant that these drugs do not induce interstrand-crosslinks (ICL), stalled shrinkage of the size of the tumors compared with the size at the replication forks or double strand breaks on DNA that would beginning of the treatment (Figs. 4D, G, H and 5D, G, H). Treatment require processing by the Fanconi anemia pathway. We further did not have a major impact on mouse weight (Supplementary analyzed their genotoxic capacity in Fanconi anemia cells, which are Fig. S2A–S2D). The efficacy of the treatment was further confirmed highly sensitive to ICLs such as diepoxybutane (32). Again, as seen measuring the weight and the average volume change of the tumors at in Fig. 2C–G, high concentrations of gefitinib or afatinib were the end of the experiment (Supplementary Fig. S2E–S2L). Finally, – unable to induce chromosome fragility (micronuclei, MN) or G2 M tumors from vehicle-treated mice showed strong phospho-ERK cell-cycle arrest (a specific hallmark of Fanconi anemia cells treated immunostaining (Figs. 4I–J and 5I–J and Supplementary Fig. S3), with ICL-inducing agents) in WT or Fanconi anemia lymphoblas- while tumors from gefitinib or afatinib-treated mice had almost no toid cell lines, which express EGFR (Fig. 2D) and are derived from phospho-ERK signal, confirming a high efficiency of either drug in T cells reported to have a functional EGFR pathway (33, 34). In inhibiting the EGFR pathway in both HNSCC in vivo. summary, our in vitro results showed that nontumor Fanconi anemia cells could be safely treated with gefitinib and afatinib at Gefitinib and afatinib treatment did not produce hematotoxicity therapeutic concentrations, as they did not activate the FA/BRCA in Fanca-deficient mice pathway, nor induce chromosome fragility or cell-cycle arrest in the Our in vitro results show gefitinib and afatinib are innocuous in absence of the Fanconi anemia pathway. Fanconi anemia fibroblast cells at therapeutic concentrations (Fig. 2). The most frequently reported adverse effects (AE) for these drugs in EGFR pathway in Fanconi anemia HNSCCs humans are skin rashes, diarrhea, and nausea and vomiting, among Previous reports indicate that the EGFR pathway is functional in others (40–42). Thus, hematologic toxicity was not expected, but given sporadic HNSCCs, and targeting this pathway inhibits tumor the extreme fragility of patients with FA, we sought to discard toxicity growth (35). Thus, we sought to further explore the EGFR pathway of these EGFR inhibitors in animal models of the disease. After two inhibition achieved by gefitinib and afatinib in Fanconi anemia weeks of chronic administration of gefitinib or afatinib in wild-type HNSCCs. As shown in Fig. 3A, 24-hour treatment with gefitinib or (WT) and Fanca-deficient mice, we monitored weight and general afatinib inhibited downstream signaling mediators of the EGFR health status three times a week, hematologic parameters before and at pathway in all three Fanconi anemia HNSCC cell lines tested, such the end of the experiment, and bone marrow status when mice were as phosphorylated AKT or ERK1/2. As previously reported in sporadic sacrificed. As seen in Fig. 6A,gefitinib treatment had no effects on HNSCCs (36), we also observed that the EGFR pathway was over- body weight either in the WT or in Fanca-deficient mice. General activated in Fanconi anemia HNSCCs in comparison with primary health status showed no evident toxicity, especially skin rash or fibroblasts, as detected by total and phosphorylated EGFR expression diarrhea, typical adverse effects reported for gefitinib and afatinib. (Fig. 3B). In the general population, the majority of HNSCCs have We did not observe any differences in white or red blood cells, platelets, mutations in TP53 (72%) or PIK3CA (18%) genes, but few in EGFR hemoglobin, hematocrit, or leukocyte populations from peripheral þ (4%; refs. 35, 37, 38). Interestingly, van Zeeburg and colleagues showed blood (CD4 and CD8 T cells, B cells, and myeloid cells), LSK cells or a similar TP53 mutation trend in Fanconi anemia HNSCCs (8 of 13 colony-forming units (CFU) from bone marrow (Fig. 6; Supplemen- Fanconi anemia HNSCCs tested, 62%, carried TP53 mutations; ref. 39). tary S4–S7). Following afatinib treatment, some Fanca-deficient mice Mutation analysis of key tumor-promoting genes showed that all showed weight loss during the first week of the treatment (Fig. 7A). three Fanconi anemia HNSCCs presented mutations in TP53,witha Clinical trials in HNSCC and NSCLC show that afatinib efficacy is variant frequency of almost 100% in DNA from the 1131 and 1604 higher than the standard of care but produces more toxicity and AEs cell lines, and 34% from the 1365 cell line (Fig. 3C;ref.24).Noother than gefitinib. In these cases, a dose adjustment is often chosen with genes, such as EGFR, PIK3CA, AKT1, NRAS,orKRAS were found good results (43, 44). For this reason, from day 7, we reduced afatinib mutated in these cell lines. Interestingly, EGFR MLPA assay showed dosages while maintaining its therapeutic effect (from 20 mg/kg/day to a gain in EGFR copy number for 1131 and 1604, but not for 1365 15 mg/kg/day). Fanca-deficient mice progressed favorably after dose cell lines (data not shown). These results highlight that Fanconi reduction and indeed recovered weight at the end of the experiment, anemia HNSCC cell lines have a functional EGFR pathway similar also seen in wild-type mice (Fig. 7A; Supplementary S4D). Afatinib to sporadic HNSCCs, with no mutations in key genes, increased administration also mildly reduced some hematologic parameters, but EGFR activity, and expression, in 2 of 3 cell lines with EGFR gene in both WT and Fanca-deficient mice, and blood counts were always copy number gain, and functional AKT and ERK1/2 activities that within the physiologic range (Fig. 7; Supplementary Figs. S4, S6, and could be inhibited by gefitinib and afatinib. S7; ref. 45). Notably, we did see an increase in blood myeloid cells in Fanca-deficient mice, which could suggest an increase in infection Gefitinib and afatinib inhibit growth of Fanconi anemia HNSCCs susceptibility, as previously reported for this drug (Supplementary in mouse xenografts Fig. S7B; refs. 46, 47). Finally, to exclude any in vivo genotoxic effects To further investigate the therapeutic potential of gefitinib and on chromosomal stability, we analyzed MN presence in blood reti- afatinib for Fanconi anemia HNSCC, we used a preclinical mouse culocytes, which reflects acute chromosome fragility, and in erythro- subcutaneous xenograft model. The Fanconi anemia HNSCC cell lines cytes, which represents chronic chromosomal instability in bone 1604 and 1131 were subcutaneously implanted in NOD-SCID immu- marrow erythroid precursors in vivo (17). Fanca-deficient mice spon- nodeficient mice. Tumor growth was monitored over time, and when taneously showed a reduction in reticulocyte counts (Supplementary the tumors reached approximately 150 mm3, animals were random- Fig. S8A), while MN from erythrocytes or reticulocytes increased by ized into vehicle control groups or gefitinib (Fig. 4) and afatinib more than two-fold respect WT mice (Fig. 6F; Supplementary S8B). (Fig. 5) treatment groups. Importantly, treatment with these two FDA/ Interestingly, neither gefitinib nor afatinib treatment affected these EMA-approved EGFR inhibitors led to a significant reduction of the chromosome fragility biomarkers in wild-type or Fanca-deficient
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Gefitinib and Afatinib for HNSCC in Fanconi Anemia
Figure 3. EGFR pathway in Fanconi anemia (FA) HNSCC cell lines. A, 1365 (left), 1131 (middle), and 1604 (right) Fanconi anemia HNSCC cells were stimulated 24 hours with the indicated doses of gefitinib and afatinib, and Western blots for expression and phosphorylation status of key kinases of the EGFR pathway were performed. Vinculin was used as a loading control (p-Vinculin refers to membranes blotted with phospho-antibodies). Images are representative of at least three independent experiments with similar results. B, Total EGFR and phospho-EGFR basal expression in Fanconi anemia HNSCC in comparison with WT and Fanconi anemia primary fibroblasts (left). Relative expression normalized to WT primary fibroblasts is shown. Middle and right graphs show mean SEM of phospho-EGFR and total EGFR, respectively, of three independent experiments. C, Gene variants identified and their frequency in Fanconi anemia HNSCCs using TruSight Tumor 15 kit (see Materials and Methods).
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AB Gefitinib Vehicle Gefitinib Vehicle
CDEF
600 Vehicle 100 1,200 Vehicle **** 100
) Gefitinib ) Gefitinib **** 3 *** 3 PD SD PD 500 **** 80 SD 1,000 80 **** T **** 400 **** 60 800 60 *** ECIS **** ECIST PR PR CR 300 600 CR *** 40 ** 40 %R 200 400 * %R 20 20 100 200 Tumor volume (mm 0 Tumor volume (mm 0 0 0 0 5 10 15 20 25 30 0 5 10 15 20 25 30 Vehicle Days after implantation Days after implantation Vehicle Gefitinib Gefitinib
GH 500 1,200
400 1,000 % T/V = −36.53 % T/V = 9.04 800 300 600 200 400 100 200 0 Tumor volume change (%) Tumor volume change (%) 0 −100 −100 Vehicle Gefitinib Vehicle Gefitinib IJ
10x 10x
Vehicle Vehicle
10x 10x Gefitinib Gefitinib
Figure 4. Gefitinib inhibits Fanconi anemia (FA) HNSCC growth in vivo in mouse xenograft experiments. Fanconi anemia (FA)-derived HNSCC 1604 (A, C, D, G, I)and1131 (B, E, F, H, J) xenografts are shown. A and B, Excised tumors at endpoint. C and E, Tumor growth by vehicle (black lines) or gefitinib (blue lines) treatment groups. The arrow indicates the start of the treatment. Graphs show mean SEM. D and F, Response Evaluation Criteria in Solid Tumors (RECIST) classification from the percentage of tumor volume change. CR, complete response; PR, partial response; SD, stable disease; PD, progression disease. G and H, Percentage of tumor volume change at baseline (start of treatment) for individual tumors (black bars, vehicle; blue bars, gefitinib). The percentage of tumor volume change of treated (T) versus vehicle (V) is shown. Dashed lines represent 20% volume above and 30% below the x-axis. I and J, IHC of phospho-ERK activation in representative formalin-fixed, paraffin-embedded tumors from xenografts treated with vehicle (top) or gefitinib (bottom). Student t test: , P < 0.05; , P < 0.01; , P < 0.001; , P < 0.0001.
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Gefitinib and Afatinib for HNSCC in Fanconi Anemia
AB Vehicle Afatinib Afatinib Vehicle
CDEF 600 Vehicle 100 1,200 Vehicle 100 Afatinib **** Afatinib
) ) **** SD PD SD PD 3 500 **** 80 3 1,000 **** 80
**** T 400 800 **** **** 60 60 **** 600 ECIST PR 300 *** CR CR PR *** 40 *** 40 %R 200 %RECIS 400 *** 20 ** 20 100 200 Tumor volume (mm Tumor volume (mm 0 0 0 0 0 5 10 15 20 25 30 0 5 10 15 20 25 30 Days after implantation Days after implantation Vehicle Vehicle Afatinib Afatinib
GH 500 1,200
400 1,000 % T/V = −19.30 % T/V = 16.98 300 800
200 600 400 100 200 0 Tumor volume change (%) Tumor volume change (%) 0 −100 −100 Vehicle Afatinib Vehicle Afatinib IJ
10x Vehicle Vehicle 10x
10x
10x Afatinib Afatinib
Figure 5. Afatinib inhibits Fanconi anemia (FA) HNSCC growth in vivo in mouse xenograft experiments. Fanconi anemia–derived HNSCC 1604 (A, C, D, G, I)and1131 (B, E, F, H, J) xenografts are shown. A and B, Excised tumors at endpoint. C and E, Tumor growth by vehicle (black lines) or afatinib (green lines) treatment. The arrow indicates the start of the treatment. Graphs show mean SEM. D and F, RECIST classification from the percentage of tumor volume change, as shown in Fig. 4D and F. G and H, Percentage of tumor volume change at baseline (start of treatment) for individual tumors (black bars, vehicle; green bars, afatinib). The percentage of tumor volume change of treated (T) versus vehicle (V) is shown. Dashed lines represent 20% volume above and 30% below the x-axis. I and J, IHC of phospho-ERK activation in representative formalin-fixed paraffin-embedded tumors from xenografts treated with vehicle (top) or afatinib (bottom). Student t test: , P < 0.05; , P < 0.01; , P < 0.001; , P < 0.0001.
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A 15 10 5 WT Vehicle 0 WT Gefitinib −5 Fanca−/− Vehicle −10 Fanca−/− Gefitinib −15 % Weight (from D0) −20 1 2 3 4 5 9 0 6 7 8 Days 10 11 12 13 14
BC 12 900 /mL)
9 11 800 /mL) 10 6 700 9 600 8 500 7 400 Platelets (10 300 Red blood cells (10 D0 D14 D0 D14 D0 D14 D0 D14 D0 D14 D0 D14 D0 D14 D0 D14 Veh Gef Veh Gef Veh Gef Veh Gef WT Fanca−/− WT Fanca−/− DE
10 100 8 80 6 60
cells (as %) 4 40 + BM CFUs 2 20 LSK 0 0 Veh Gef Veh Gef Veh Gef Veh Gef WT Fanca−/− WT Fanca−/−
FG * *** ns ns 0.3 0.3
0.2 0.2
0.1 0.1 %MN-Erythrocytes %MN-Erythrocytes 0.0 0.0 WT FA Veh Gef Veh Gef WT Fanca−/−
Figure 6. Gefitinib is nontoxic in Fanca-deficient mice. A, Percentage body weight of wild-type and Fanca-deficient mice, treated with vehicle or gefitinib (see Materials and Methods). Red blood cells (B) and platelets (C) at 0 and 14 days of vehicle or gefitinib treatment. Dashed lines in B show physiologic range of red blood cells. D and E, LSKþ cell percentage (D) and colony-forming units (CFU) capacity from bone marrow cells (E) at endpoint (14 days). F and G, In vivo genotoxic analysis in murine blood cells. F, Percentage of erythrocytes with MN in wild-type versus Fanca-deficient mice. G, Percentage of MN erythrocytes in mice treated with vehicle or gefitinib. B–G graphs show data for individual mouse (solid dots, wild-type, open dots, Fanca-deficient) and mean SEM. Student t test: ns, not significant; , P < 0.05; , P < 0.001.
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Gefitinib and Afatinib for HNSCC in Fanconi Anemia
Figure 7. A 15 Afatinib is nontoxic in Fanca- 10 deficient mice. A, Percentage body Fanca 5 weight of wild-type and - WT Vehicle deficient mice, treated with vehicle 0 or afatinib. From day 7, afatinib WT Afatinib −5 dose was reduced from 20 mg/kg/ Fanca−/− Vehicle day to 15 mg/kg/day. Red blood −10 Fanca−/− Afatinib cells (B) and platelets (C)at0 −
% (from Weight T0) 15 and 14 days of vehicle or afatinib − treatment. Dashed lines in B show 20 1 2 5 6 0 3 4 7 8 9 Days 11 12 13 14 physiologic range of red blood 10 cells. LSKþ cell percentage (D) and colony-forming units (CFU) capacity from bone marrow BC cells (E) at endpoint (14 days). CFU 12 900
graph shows afatinib data super- /mL) 9 11 * * 800 imposed to gefitinib data from 0 /mL) (1 Fig 6E. F, Percentage of MN ery- 10 6 700 throcytes in mice treated with vehicle or afatinib. B–F graphs 9 600 show data for individual mouse 8 500 (solid dots, wild-type, open dots, Fanca-deficient) and mean 7 400 Platelets (10 SEM. t test: ns, not significant; 300