By the Rijksherbarium, Leiden
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Phylogeny and Classification of Cryptodiscus, with a Taxonomic Synopsis of the Swedish Species
Fungal Diversity Phylogeny and classification of Cryptodiscus, with a taxonomic synopsis of the Swedish species Baloch, E.1,3*, Gilenstam, G.2 and Wedin, M.1 1Department of Cryptogamic Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden. 2Department of Ecology and Environmental Sciences, Umeå University, SE-901 87 Umeå, Sweden. 3Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AB, UK. Baloch, E., Gilenstam, G. and Wedin, M. (2009). Phylogeny and classification of Cryptodiscus, with a taxonomic synopsis of the Swedish species. Fungal Diversity 38: 51-68. The phylogeny, taxonomy and classification of Cryptodiscus are examined. The current generic and species delimitations, and the relationship of the genus within the Ostropomycetidae, are tested by molecular phylogenetic analyses of the nuclear ITS and LSU rDNA and the mitochondrial SSU rDNA. In our new circumscription Cryptodiscus is a monophyletic group of saprotrophic and lichenized fungi characterized by small, urceolate apothecia, mostly hyaline ascomatal walls without any embedded crystals, no clear periphysoids, and with oblong to narrow- cylindrical septate ascospores. Cryptodiscus forms a well-supported clade together with Absconditella and the remaining Stictidaceae. Paschelkiella and Bryophagus are synonymised with Cryptodiscus. Species excluded from Cryptodiscus are Cryptodiscus anguillosporus, C. angulosus, C. microstomus, and C. rhopaloides. Cryptodiscus in Sweden is revised and six species are accepted, of which one is newly described: C. foveolaris, C. gloeocapsa comb. nov. (≡ Bryophagus gloeocapsa), C. incolor sp. nov., C. pallidus, C. pini comb. nov. (≡ Paschelkiella pini), and the rediscovered species C. tabularum. The additional new combinations Cryptodiscus similis comb. nov. and C. -
Annotated Check List and Host Index Arizona Wood
Annotated Check List and Host Index for Arizona Wood-Rotting Fungi Item Type text; Book Authors Gilbertson, R. L.; Martin, K. J.; Lindsey, J. P. Publisher College of Agriculture, University of Arizona (Tucson, AZ) Rights Copyright © Arizona Board of Regents. The University of Arizona. Download date 28/09/2021 02:18:59 Link to Item http://hdl.handle.net/10150/602154 Annotated Check List and Host Index for Arizona Wood - Rotting Fungi Technical Bulletin 209 Agricultural Experiment Station The University of Arizona Tucson AÏfJ\fOTA TED CHECK LI5T aid HOST INDEX ford ARIZONA WOOD- ROTTlNg FUNGI /. L. GILßERTSON K.T IyIARTiN Z J. P, LINDSEY3 PRDFE550I of PLANT PATHOLOgY 2GRADUATE ASSISTANT in I?ESEARCI-4 36FZADAATE A5 S /STANT'" TEACHING Z z l'9 FR5 1974- INTRODUCTION flora similar to that of the Gulf Coast and the southeastern United States is found. Here the major tree species include hardwoods such as Arizona is characterized by a wide variety of Arizona sycamore, Arizona black walnut, oaks, ecological zones from Sonoran Desert to alpine velvet ash, Fremont cottonwood, willows, and tundra. This environmental diversity has resulted mesquite. Some conifers, including Chihuahua pine, in a rich flora of woody plants in the state. De- Apache pine, pinyons, junipers, and Arizona cypress tailed accounts of the vegetation of Arizona have also occur in association with these hardwoods. appeared in a number of publications, including Arizona fungi typical of the southeastern flora those of Benson and Darrow (1954), Nichol (1952), include Fomitopsis ulmaria, Donkia pulcherrima, Kearney and Peebles (1969), Shreve and Wiggins Tyromyces palustris, Lopharia crassa, Inonotus (1964), Lowe (1972), and Hastings et al. -
Why Mushrooms Have Evolved to Be So Promiscuous: Insights from Evolutionary and Ecological Patterns
fungal biology reviews 29 (2015) 167e178 journal homepage: www.elsevier.com/locate/fbr Review Why mushrooms have evolved to be so promiscuous: Insights from evolutionary and ecological patterns Timothy Y. JAMES* Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA article info abstract Article history: Agaricomycetes, the mushrooms, are considered to have a promiscuous mating system, Received 27 May 2015 because most populations have a large number of mating types. This diversity of mating Received in revised form types ensures a high outcrossing efficiency, the probability of encountering a compatible 17 October 2015 mate when mating at random, because nearly every homokaryotic genotype is compatible Accepted 23 October 2015 with every other. Here I summarize the data from mating type surveys and genetic analysis of mating type loci and ask what evolutionary and ecological factors have promoted pro- Keywords: miscuity. Outcrossing efficiency is equally high in both bipolar and tetrapolar species Genomic conflict with a median value of 0.967 in Agaricomycetes. The sessile nature of the homokaryotic Homeodomain mycelium coupled with frequent long distance dispersal could account for selection favor- Outbreeding potential ing a high outcrossing efficiency as opportunities for choosing mates may be minimal. Pheromone receptor Consistent with a role of mating type in mediating cytoplasmic-nuclear genomic conflict, Agaricomycetes have evolved away from a haploid yeast phase towards hyphal fusions that display reciprocal nuclear migration after mating rather than cytoplasmic fusion. Importantly, the evolution of this mating behavior is precisely timed with the onset of diversification of mating type alleles at the pheromone/receptor mating type loci that are known to control reciprocal nuclear migration during mating. -
Diversity of Polyporales in the Malay Peninsular and the Application of Ganoderma Australe (Fr.) Pat
DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY INSTITUTE OF BIOLOGICAL SCIENCES FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 UNIVERSITI MALAYA ORIGINAL LITERARY WORK DECLARATION Name of Candidate: MOHAMAD HASNUL BIN BOLHASSAN (I.C No: 830416-13-5439) Registration/Matric No: SHC080030 Name of Degree: DOCTOR OF PHILOSOPHY Title of Project Paper/Research Report/Disertation/Thesis (“this Work”): DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS. Field of Study: MUSHROOM DIVERSITY AND BIOTECHNOLOGY I do solemnly and sincerely declare that: 1) I am the sole author/writer of this work; 2) This Work is original; 3) Any use of any work in which copyright exists was done by way of fair dealing and for permitted purposes and any excerpt or extract from, or reference to or reproduction of any copyright work has been disclosed expressly and sufficiently and the title of the Work and its authorship have been acknowledge in this Work; 4) I do not have any actual -
Auriculariales, Basidiomycota) Evidenced by Morphological Characters and Phylogenetic Analyses in China
Phytotaxa 437 (2): 051–059 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2020 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.437.2.1 Heteroradulum yunnanensis sp. nov. (Auriculariales, Basidiomycota) evidenced by morphological characters and phylogenetic analyses in China QIAN-XIN GUAN1,2, CHAO-MAO LIU2, TANG-JIE ZHAO3 & CHANG-LIN ZHAO1,2,4* 1Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming 650224, P.R. China 2College of Biodiversity Conservation, Southwest Forestry University, Kunming 650224, P.R. China 3Wenshan Forestry Research Institute, Wenshan, Yunnan 663300, P.R. China 4Key Laboratory of Forest Disaster Warning and Control of Yunnan Province, Southwest Forestry University, Kunming 650224, P.R. China *Corresponding author’s e-mail: [email protected] Abstract A new wood-inhabiting fungal species, Heteroradulum yunnanensis, is proposed based on a combination of morphological features and molecular evidence. The species is characterized by an annual growth habit, resupinate basidiomata with odontoid hymenial surface (50–100 µm long), more or less pronounced yellow stains in older basidiomata, a monomitic hyphal system with thin-walled, clamped generative hyphae and two to three-celled basidia and cylindrical, hyaline, thin- walled, smooth, IKI–, CB– basidiospores measuring as 17–24 ×5–8 µm. Sequences of ITS and LSU nrRNA gene regions of the studied samples were generated, and phylogenetic analyses were performed with maximum likelihood, maximum parsimony and bayesian inference methods. The phylogenetic analyses based on molecular data of ITS+nLSU sequences showed that Heteroradulum yunnanensis formed a monophyletic lineage with a strong support (100% BS, 100% BP, 1.00 BPP) and then grouped with H. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Herbariet Publ 2010-2019 (PDF)
Publikationer 2019 Amorim, B. S., Vasconcelos, T. N., Souza, G., Alves, M., Antonelli, A., & Lucas, E. (2019). Advanced understanding of phylogenetic relationships, morphological evolution and biogeographic history of the mega-diverse plant genus Myrcia and its relatives (Myrtaceae: Myrteae). Molecular phylogenetics and evolution, 138, 65-88. Anderson, C. (2019). Hiraea costaricensis and H. polyantha, Two New Species Of Malpighiaceae, and circumscription of H. quapara and H. smilacina. Edinburgh Journal of Botany, 1-16. Athanasiadis, A. (2019). Carlskottsbergia antarctica (Hooker fil. & Harv.) gen. & comb. nov., with a re-assessment of Synarthrophyton (Mesophyllaceae, Corallinales, Rhodophyta). Nova Hedwigia, 108(3-4), 291-320. Athanasiadis, A. (2019). Amphithallia, a genus with four-celled carpogonial branches and connecting filaments in the Corallinales (Rhodophyta). Marine Biology Research, 15(1), 13-25. Bandini, D., Oertel, B., Moreau, P. A., Thines, M., & Ploch, S. (2019). Three new hygrophilous species of Inocybe, subgenus Inocybe. Mycological Progress, 18(9), 1101-1119. Baranow, P., & Kolanowska, M. (2019, October). Sertifera hirtziana (Orchidaceae, Sobralieae), a new species from southeastern Ecuador. In Annales Botanici Fennici (Vol. 56, No. 4-6, pp. 205-209). Barboza, G. E., García, C. C., González, S. L., Scaldaferro, M., & Reyes, X. (2019). Four new species of Capsicum (Solanaceae) from the tropical Andes and an update on the phylogeny of the genus. PloS one, 14(1), e0209792. Barrett, C. F., McKain, M. R., Sinn, B. T., Ge, X. J., Zhang, Y., Antonelli, A., & Bacon, C. D. (2019). Ancient polyploidy and genome evolution in palms. Genome biology and evolution, 11(5), 1501-1511. Bernal, R., Bacon, C. D., Balslev, H., Hoorn, C., Bourlat, S. -
A Multigene Phylogenetic Synthesis for the Class Lecanoromycetes (Ascomycota): 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., ... & Stenroos, S. (2014). A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution, 79, 132-168. doi:10.1016/j.ympev.2014.04.003 10.1016/j.ympev.2014.04.003 Elsevier Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
Characterization of a Basidiomycete Fungus from Stored Sugar Beet Roots
Mycologia, 104(1), 2012, pp. 70–78. DOI: 10.3852/10-416 # 2012 by The Mycological Society of America, Lawrence, KS 66044-8897 Characterization of a Basidiomycete fungus from stored sugar beet roots Takeshi Toda1 sugar beet (Beta vulgaris L.) harvested from commer- Department of Bioresource Sciences, Akita Prefectural cial fields in 2006 and 2007 in Idaho (USA) after University, Akita, Japan 010-0195 approximately 60 d at 1.7 C under high relative Carl A. Strausbaugh humidity (97–100%) indoors (FIG. 1A, B). Fungal United States Department of Agriculture, Agricultural growth continued after the initial observation, and Research Service NWISRL, 3793 N. 3600 E. Kimberly, mycelium extended 15 cm or more from the sugar Idaho 83341-5076 beet roots after 90 d and formed a white crust on the surface of the roots when removed from humid Marianela Rodriguez-Carres environment. Similar observations were made on Marc A. Cubeta roots of sugar beet stored in outdoor piles under Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina, 27695-7616 ambient environmental conditions. The presence of the unknown fungus was shown by Strausbaugh et al. (2009) to be correlated with loss of Abstract: Eighteen isolates from sugar beet roots sucrose from stored sugar beet roots, particularly associated with an unknown etiology were character- from roots infected with Beet necrotic yellow vein ized based on observations of morphological charac- virus (BNYVV). For example, when sugar beet roots ters, hyphal growth at 4–28 C, production of phenol were infected with BNYVV and stored in an indoor oxidases and sequence analysis of internal transcribed facility in Paul, Idaho, in 2007 and 2008, 27 and 40% spacer (ITS) and large subunit (LSU) regions of the of the root surface was covered with growth of the ribosomal DNA (rDNA). -
Sclerotium Rolfsii; Causative Organism of Southern Blight, Stem Rot, White Mold and Sclerotia Rot Disease
Available online a t www.scholarsresearchlibrary.com Scholars Research Library Annals of Biological Research, 2015, 6 (11):78-89 (http://scholarsresearchlibrary.com/archive.html) ISSN 0976-1233 CODEN (USA): ABRNBW Sclerotium rolfsii; Causative organism of southern blight, stem rot, white mold and sclerotia rot disease 1Liamngee Kator, 1Zakki Yula Hosea and 2Onah Daniel Oche 1Department of Biological Sciences, Benue State University Makurdi, Nigeria 2Department of Medical Laboratory Science, School of Health Technology, Agasha, Benue State _____________________________________________________________________________________________ ABSTRACT Sclerotium rolfsii is a soil borne pathogen that causes stem rot disease on plants. It primarily attacks host stems including roots, fruits, petioles and leaves under favourable conditions. It commonly occurs in the tropics, subtropics and other warm temperate regions of the world. Common hosts are legumes, crucifers and cucurbits. On a global perspective, estimated losses of 10 – 20 million dollars associated with S. rolfsii have been recorded with yield depletion ranging from 1 – 60% in fields. Sclerotia serve as primary inoculum for the pathogen and are spread to uninfected areas by wind, water, animals and soil. Control measures include excluding the pathogen from the area, plant removal, soil removal, soil treatment, heat, solarization, chemical soil treatment, cultural practices, resistance and transgenic plant resistance, plant treatment, crop rotation, amongst others. Despite considerable research on this pathogen, its control continues to be a problem. Keywords: Sclerotium rolfsii, stem rot, white mold, stem blight. _____________________________________________________________________________________________ INTRODUCTION Sclerotium rolfsii is a destructive soil borne plant pathogen which causes Southern blight disease on a wide variety of plants. In 1928, the United States Department of Agriculture reported that S. -
Ceratobasidium Cereale D
CA LIF ORNIA D EPA RTM EN T OF FOOD & AGRICULTURE California Pest Rating Proposal for Ceratobasidium cereale D. Murray & L.L. Burpee 1984 Yellow patch of turfgrass/sharp eye spot of cereals Current Pest Rating: Z Proposed Pest Rating: C Kingdom: Fungi; Phylum: Basidiomycota Class: Agaricomycetes; Subclass: Agaricomycetidae Order: Ceratobasidiales; Family: Ceratobasidiaceae Comment Period: 3/24/2020 through 5/8/2020 Initiating Event: On 1/29/2020, a regulatory sample for nursery cleanliness from a commercial sod farm was submitted by an agricultural inspector in San Joaquin County to the CDFA plant diagnostics center. The turf was grown from a 90% tall dwarf fescue and 10% bluegrass seed mix. On February 10, 2020, CDFA plant pathologist Suzanne Rooney-Latham detected Ceratobasidium cereale (syn. Rhizoctonia cerealis) in culture from yellow leaf blades. This fungus causes yellow patch disease on turfgrass. Due to previous reports of this pathogen from University of California farm advisors, it was assigned a temporary Z rating. The risk to California from Ceratobasidium cereale is assessed herein and a permanent rating is proposed. History & Status: Background: The name Ceratobasidium cereale was proposed by Murray and Burpee in 1984 after they were able to induce otherwise sterile isolates that had been classified as Corticium gramineum or Rhizoctonia cerealis to form the basidia (sexual state) on agar. Their work resulted in the name Corticium gramineum being reduced to a nomen dubium (doubtful name). However, because the production of basidia has not been observed under field conditions, many still use the name Rhizoctonia cerealis to CA LIF ORNIA D EPA RTM EN T OF FOOD & AGRICULTURE describe a pathogen that does not produce spores and is composed only of sterile hyphae and sclerotia.