Genetics: Early Online, published on August 12, 2016 as 10.1534/genetics.116.192427 Studies of the Fonni’s Dogs from Sardinia show commonalities between development of pure breeds and population isolates Dayna L. Dreger*, Brian W. Davis*, Raffaella Cocco†, Sara Sechi†, Alessandro Di Cerbo‡, Heidi G. Parker*, Michele Polli§, Stefano P. Marelli§, Paola Crepaldi§, Elaine A. Ostrander* *Cancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892 †Dipartimento di Medicina Veterinaria, Sezione Clinica Medica, University di Sassari, Italy ‡School of Specialization in Clinical Biochemistry, G. d’Annunzio University, Chieti, Italy §Dipartimento di Medicina Veterinaria, Universita di Milano, Italy Whole-genome sequence was produced for this study from a single Fonni’s Dog, submitted to the Sequence Read Archive (PRJNA318762) for release upon manuscript acceptance. Previously published whole-genome sequence obtained from the Sequence Read Archive is listed in Table 1 with corresponding accession numbers. Genotype data from the Illumina CanineHD array has been submitted to Gene Expression Omnibus (GSE83160). 1 Copyright 2016. RUNNING TITLE Fonni’s Dog mirrors human population isolates KEY WORDS dog, whole genome sequence, demography, population structure CORRESPONDING AUTHOR Elaine A. Ostrander, Ph.D. National Human Genome Research Institute, National Institutes of Health 50 South Drive, Building 50, Room 5351, Bethesda MD, 20892 Phone: 301 594 5284 FAX 301-480-0472
[email protected] 2 ABSTRACT The island inhabitants of Sardinia have long been a focus for studies of complex human traits due to their unique ancestral background and population isolation reflecting geographic and cultural restriction. Population isolates share decreased genomic diversity, increased linkage disequilibrium, and increased inbreeding coefficients.