NOAA Technical Report NMFS SSRF-668
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Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – APRIL 2011
SGR 129 Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – APRIL 2011 DEPARTMENT OF HEALTH AND HUMAN SERVICES PUBLIC HEALTH SERVICE FOOD AND DRUG ADMINISTRATION CENTER FOR FOOD SAFETY AND APPLIED NUTRITION OFFICE OF FOOD SAFETY Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – April 2011 Additional copies may be purchased from: Florida Sea Grant IFAS - Extension Bookstore University of Florida P.O. Box 110011 Gainesville, FL 32611-0011 (800) 226-1764 Or www.ifasbooks.com Or you may download a copy from: http://www.fda.gov/FoodGuidances You may submit electronic or written comments regarding this guidance at any time. Submit electronic comments to http://www.regulations. gov. Submit written comments to the Division of Dockets Management (HFA-305), Food and Drug Administration, 5630 Fishers Lane, Rm. 1061, Rockville, MD 20852. All comments should be identified with the docket number listed in the notice of availability that publishes in the Federal Register. U.S. Department of Health and Human Services Food and Drug Administration Center for Food Safety and Applied Nutrition (240) 402-2300 April 2011 Table of Contents: Fish and Fishery Products Hazards and Controls Guidance • Guidance for the Industry: Fish and Fishery Products Hazards and Controls Guidance ................................ 1 • CHAPTER 1: General Information .......................................................................................................19 • CHAPTER 2: Conducting a Hazard Analysis and Developing a HACCP Plan -
Barndoor Skate, Dipturus Laevis, Life History and Habitat Characteristics
NOAA Technical Memorandum NMFS-NE-173 Essential Fish Habitat Source Document: Barndoor Skate, Dipturus laevis, Life History and Habitat Characteristics U. S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Northeast Region Northeast Fisheries Science Center Woods Hole, Massachusetts March 2003 Recent Issues in This Series: 155. Food of Northwest Atlantic Fishes and Two Common Species of Squid. By Ray E. Bowman, Charles E. Stillwell, William L. Michaels, and Marvin D. Grosslein. January 2000. xiv + 138 p., 1 fig., 7 tables, 2 app. NTIS Access. No. PB2000-106735. 156. Proceedings of the Summer Flounder Aging Workshop, 1-2 February 1999, Woods Hole, Massachusetts. By George R. Bolz, James Patrick Monaghan, Jr., Kathy L. Lang, Randall W. Gregory, and Jay M. Burnett. May 2000. v + 15 p., 5 figs., 5 tables. NTIS Access. No. PB2000-107403. 157. Contaminant Levels in Muscle of Four Species of Recreational Fish from the New York Bight Apex. By Ashok D. Deshpande, Andrew F.J. Draxler, Vincent S. Zdanowicz, Mary E. Schrock, Anthony J. Paulson, Thomas W. Finneran, Beth L. Sharack, Kathy Corbo, Linda Arlen, Elizabeth A. Leimburg, Bruce W. Dockum, Robert A. Pikanowski, Brian May, and Lisa B. Rosman. June 2000. xxii + 99 p., 6 figs., 80 tables, 3 app., glossary. NTIS Access. No. PB2001-107346. 158. A Framework for Monitoring and Assessing Socioeconomics and Governance of Large Marine Ecosystems. By Jon G. Sutinen, editor, with contributors (listed alphabetically) Patricia Clay, Christopher L. Dyer, Steven F. Edwards, John Gates, Tom A. Grigalunas, Timothy Hennessey, Lawrence Juda, Andrew W. Kitts, Philip N. -
Evolution of Cyclooxygenase in the Chordates
EVOLUTION OF CYCLOOXYGENASE IN THE CHORDATES By JUSTIN CHASE HAVIRD A THESIS PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE UNIVERSITY OF FLORIDA 2008 1 © 2008 Justin Chase Havird 2 To the teachers who inspired, directed, and challenged me. My high school marine biology teacher, Larry Joye, first introduced me to the fascinating world of life in the water and since then my endeavors have never strayed far from it. Dr. David Evans enthusiastically welcomed me into his lab as an undergraduate, although I had no former research experience. What started as a part-time project soon evolved into an academic career as I was given the opportunity to conduct original research. During this time, Dr. Keith Choe was an invaluable asset and inspiration. Growing from this original partnership, I continued working with David on my master’s research and he has always supported my academic and research endeavors; I cannot envision a better advisor. 3 ACKNOWLEDGMENTS I most of all thank my supervisory committee chair, Dr. David H. Evans. Although David was nearing retirement and had resolved to not accept any new students, he welcomed me as a graduate student without any hesitation. He has guided me in developing research strategies, implementing those strategies, and interpreting the results. He has always supported my projects and none of them would have been accomplished without his enthusiasm. I also thank my supervisory committee members for their commitment to my research and their willingness to share their expertise. -
Molecular and Immunohistochemical Identification of a Sodium Hydrogen
Georgia Southern University Digital Commons@Georgia Southern Electronic Theses and Dissertations Graduate Studies, Jack N. Averitt College of Summer 2011 Molecular and Immunohistochemical Identification of a Sodium Hydrogen Exchanger-2C (Nhe2C) Paralog in the Gills of Marine Longhorn Sculpin (Myoxocephalus Octodecemspinosus) Demi Brett Rabeneck Follow this and additional works at: https://digitalcommons.georgiasouthern.edu/etd Recommended Citation Rabeneck, Demi Brett, "Molecular and Immunohistochemical Identification of a Sodium Hydrogen Exchanger-2C (Nhe2C) Paralog in the Gills of Marine Longhorn Sculpin (Myoxocephalus Octodecemspinosus)" (2011). Electronic Theses and Dissertations. 752. https://digitalcommons.georgiasouthern.edu/etd/752 This thesis (open access) is brought to you for free and open access by the Graduate Studies, Jack N. Averitt College of at Digital Commons@Georgia Southern. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Digital Commons@Georgia Southern. For more information, please contact [email protected]. MOLECULAR AND IMMUNOHISTOCHEMICAL IDENTIFICATION OF A SODIUM HYDROGEN EXCHANGER-2C (NHE2C) PARALOG IN THE GILLS OF MARINE LONGHORN SCULPIN (MYOXOCEPHALUS OCTODECEMSPINOSUS) by DEMI BRETT RABENECK (Under the Direction of James B. Claiborne) ABSTRACT Sodium hydrogen exchanger proteins (NHEs) are members of the cation proton antiporter superfamily (CPA) and are thought to function in fish for maintaining physiological ion concentrations and acid-base balances by excreting excess H+ ions from the body in exchange for Na+ ions. There are many more types of these proteins in teleost fish than in mammals due to putative genome duplication. This study describes a new form of NHE2 in the gills of marine longhorn sculpin, Myoxocephalus octodecemspinosus, designated NHE2c. -
Chapter 5: Commercial and Recreational Fisheries
Ocean Special Area Management Plan Chapter 5: Commercial and Recreational Fisheries Table of Contents 500 Introduction.............................................................................................................................9 510 Marine Fisheries Resources in the Ocean SAMP Area.....................................................12 510.1 Species Included in this Chapter ..........................................................................12 510.1.1 Species important to commercial and recreational fisheries.....................12 510.1.2 Forage fish ................................................................................................15 510.1.3 Threatened and endangered species and species of concern ....................15 510.2 Life History, Habitat, and Fishery of Commercially and Recreationally Important Species............................................................................................................17 510.2.1 American lobster.......................................................................................17 510.2.2 Atlantic bonito ..........................................................................................19 510.2.3 Atlantic cod...............................................................................................20 510.2.4 Atlantic herring .........................................................................................21 510.2.5 Atlantic mackerel......................................................................................23 510.2.6 Atlantic -
Tautoga Onitis Common Name: Tautog (Black Fish)
Species Status Assessment Class: Actinopterygii Family: Labridae Scientific Name: Tautoga onitis Common Name: Tautog (Black fish) Species synopsis: Tautog, also referred to as black fish, range along the mid-Atlantic Bight from Nova Scotia to South Carolina (Bigelow and Schroeder 1953). In New York, this species can be found in the Hudson River estuary, New York Bight and Long Island Sound. Tautog prefer areas with good shelter for protection, and are found around rock reefs, rocky outcrops, shellfish beds, gravel, eelgrass beds, and kelp or sea lettuce (Ulva lactuca) beds (Steimle and Shaheen 1999). Since the mid-1980s, tautog populations have been exposed to intensive recreational and commercial fishing (ASMFC 2011). In 1996, the Atlantic States Marine Fishery Commission drafted an interstate fishery management plan for tautog to reduce fishing mortality rates and increase recruitment (ASMFC 1996). I. Status a. Current and Legal Protected Status i. Federal ____ Not Listed______________________ Candidate? __No_____ ii. New York ____Not Listed; SGCN__________________________________________ b. Natural Heritage Program Rank i. Global _____GNR_________________________________________________________ ii. New York _____SNRN_______________ Tracked by NYNHP? ____No_____ Other Rank: United States National Status: Not assessed IUCN Red List: Vulnerable 1 Status Discussion: Tautog populations have been subject to intensive fishing over the last two decades. Approximately ninety percent of the recorded landings have come from recreational fishing although the commercial harvest of tautog for the live market is heavily under-reported. There has been a decline of 60% in recorded landings (ASMFC 2006). An intensive stock assessment confirmed that fishing mortality was above recommended levels (ASMFC 2006). II. Abundance and Distribution Trends a. -
Delaware's Wildlife Species of Greatest Conservation Need
CHAPTER 1 DELAWARE’S WILDLIFE SPECIES OF GREATEST CONSERVATION NEED CHAPTER 1: Delaware’s Wildlife Species of Greatest Conservation Need Contents Introduction ................................................................................................................................................... 7 Regional Context ........................................................................................................................................... 7 Delaware’s Animal Biodiversity .................................................................................................................... 10 State of Knowledge of Delaware’s Species ................................................................................................... 10 Delaware’s Wildlife and SGCN - presented by Taxonomic Group .................................................................. 11 Delaware’s 2015 SGCN Status Rank Tier Definitions................................................................................. 12 TIER 1 .................................................................................................................................................... 13 TIER 2 .................................................................................................................................................... 13 TIER 3 .................................................................................................................................................... 13 Mammals .................................................................................................................................................... -
Kane-Higham-2012.Pdf
G Model ZOOL-25301; No. of Pages 10 ARTICLE IN PRESS Zoology xxx (2012) xxx–xxx Contents lists available at SciVerse ScienceDirect Zoology journa l homepage: www.elsevier.com/locate/zool Life in the flow lane: differences in pectoral fin morphology suggest transitions in station-holding demand across species of marine sculpin ∗ Emily A. Kane , Timothy E. Higham University of California, Riverside, Department of Biology, 900 University Ave., Riverside, CA 92521, USA a r t i c l e i n f o a b s t r a c t Article history: Aquatic organisms exposed to high flow regimes typically exhibit adaptations to decrease overall drag Received 28 September 2011 and increase friction with the substrate. However, these adaptations have not yet been examined on a Received in revised form 27 February 2012 structural level. Sculpins (Scorpaeniformes: Cottoidea) have regionalized pectoral fins that are modified Accepted 7 March 2012 for increasing friction with the substrate, and morphological specialization varies across species. We examined body and pectoral fin morphology of 9 species to determine patterns of body and pectoral Keywords: fin specialization. Intact specimens and pectoral fins were measured, and multivariate techniques deter- Benthic fishes mined the differences among species. Cluster analysis identified 4 groups that likely represent differences Scorpaeniformes in station-holding demand, and this was supported by a discriminant function analysis. Primarily, the Flow regime high-demand group had increased peduncle depth (specialization for acceleration) and larger pectoral Functional regionalization Station-holding fins with less webbed ventral rays (specialization for mechanical gripping) compared to other groups; secondarily, the high-demand group had a greater aspect ratio and a reduced number of pectoral fin rays (specialization for lift generation) than other groups. -
COMMON NAME SCIENTIFIC NAME BYCATCH UNIT CV FOOTNOTE(S) Mid-Atlantic Bottom Longline American Lobster Homarus Americanus 35.43 P
TABLE 3.4.2a GREATER ATLANTIC REGION FISH BYCATCH BY FISHERY (2015) Fishery bycatch ratio = bycatch / (bycatch + landings). These fisheries include numerous species with bycatch estimates of 0.00; these 0.00 species are listed in Annexes 1-3 for Table 3.4.2a. All estimates are live weights. 1, 4 COMMON NAME SCIENTIFIC NAME BYCATCH UNIT CV FOOTNOTE(S) Mid-Atlantic Bottom Longline American lobster Homarus americanus 35.43 POUND 1.41 t Gadiformes, other Gadiformes 2,003.72 POUND .51 o, t Jonah crab Cancer borealis 223.42 POUND .67 t Monkfish Lophius americanus 309.83 POUND .49 e, f Night shark Carcharhinus signatus 593.28 POUND .7 t Offshore hake Merluccius albidus 273.33 POUND 1.41 Ray-finned fishes, other (demersal) Actinopterygii 764.63 POUND .64 o, t Red hake Urophycis chuss 313.85 POUND 1.39 k Scorpionfishes, other Scorpaeniformes 10.12 POUND 1.41 o, t Shark, unc Chondrichthyes 508.53 POUND .7 o, t Skate Complex Rajidae 27,670.53 POUND .34 n, o Smooth dogfish Mustelus canis 63,484.98 POUND .68 t Spiny dogfish Squalus acanthias 32,369.85 POUND 1.12 Tilefish Lopholatilus chamaeleonticeps 65.80 POUND 1.41 White hake Urophycis tenuis 51.63 POUND .85 TOTAL FISHERY BYCATCH 129,654.74 POUND TOTAL FISHERY LANDINGS 954,635.64 POUND TOTAL CATCH (Bycatch + Landings) 1,084,290.38 POUND FISHERY BYCATCH RATIO (Bycatch/Total Catch) 0.12 Mid-Atlantic Clam/Quahog Dredge American lobster Homarus americanus 4,853.05 POUND .95 t Atlantic angel shark Squatina dumeril 5,313.55 POUND .96 t Atlantic surfclam Spisula solidissima 184,454.52 POUND .93 Benthic -
Guide to the Parasites of Fishes of Canada Part V: Nematoda
Wilfrid Laurier University Scholars Commons @ Laurier Biology Faculty Publications Biology 2016 ZOOTAXA: Guide to the Parasites of Fishes of Canada Part V: Nematoda Hisao P. Arai Pacific Biological Station John W. Smith Wilfrid Laurier University Follow this and additional works at: https://scholars.wlu.ca/biol_faculty Part of the Biology Commons, and the Marine Biology Commons Recommended Citation Arai, Hisao P., and John W. Smith. Zootaxa: Guide to the Parasites of Fishes of Canada Part V: Nematoda. Magnolia Press, 2016. This Book is brought to you for free and open access by the Biology at Scholars Commons @ Laurier. It has been accepted for inclusion in Biology Faculty Publications by an authorized administrator of Scholars Commons @ Laurier. For more information, please contact [email protected]. Zootaxa 4185 (1): 001–274 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Monograph ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://doi.org/10.11646/zootaxa.4185.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:0D054EDD-9CDC-4D16-A8B2-F1EBBDAD6E09 ZOOTAXA 4185 Guide to the Parasites of Fishes of Canada Part V: Nematoda HISAO P. ARAI3, 5 & JOHN W. SMITH4 3Pacific Biological Station, Nanaimo, British Columbia V9R 5K6 4Department of Biology, Wilfrid Laurier University, Waterloo, Ontario N2L 3C5. E-mail: [email protected] 5Deceased Magnolia Press Auckland, New Zealand Accepted by K. DAVIES (Initially edited by M.D.B. BURT & D.F. McALPINE): 5 Apr. 2016; published: 8 Nov. 2016 Licensed under a Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0 HISAO P. ARAI & JOHN W. -
Dietary Guild Structure of the Fish Community in the Northeast United States Continental Shelf Ecosystem
MARINE ECOLOGY PROGRESS SERIES Vol. 202: 231–240, 2000 Published August 28 Mar Ecol Prog Ser Dietary guild structure of the fish community in the Northeast United States continental shelf ecosystem Lance P. Garrison*, Jason S. Link National Marine Fisheries Service, Northeast Fisheries Science Center, 166 Water St., Woods Hole, Massachusetts 02543, USA ABSTRACT: Trophic guild analysis identifies groups of species that use similar resources within a community. We evaluated the trophic guild structure in an assemblage of 40 fish species in the North- east United States shelf ecosystem using a 25 yr database of food habits. We explicitly accounted for ontogenetic diet shifts by separating predator species into size classes. There were 14 significant trophic guilds. These distinguished predators based upon prey size and location in the water column (i.e., benthic to pelagic feeding). Ontogenetic diet shifts were important in guild structure, particu- larly within dominant piscivores. The mean dietary overlap both between and within guilds was notably lower than in other fish communities due to the broad spatial and temporal scale of the study, the diversity of prey types consumed, and the generalist nature of predators in this system. The guild concept is a useful framework to simplify highly connected, complex ecosystems like the Northeast US continental shelf and identify ecologically similar functional units. KEY WORDS: Community structure · Fisheries · Feeding ecology · Ontogeny · Resource partitioning · Trophic groups Resale or republication not permitted without written consent of the publisher INTRODUCTION Guilds have been defined across multiple gradients including spatial and temporal habitat utilization pat- Root (1967) formulated the original definition of a terns, diet preferences, and physiological characteris- guild as ‘a group of species that exploit the same class tics (Austen et al. -
The Colonization of a Multi-Functional Artificial Reef Designed for the American Lobster, Homarus Americanus
The University of Maine DigitalCommons@UMaine Electronic Theses and Dissertations Fogler Library Spring 5-8-2020 The Colonization of a Multi-functional Artificial Reef Designed for the American Lobster, Homarus Americanus Christopher Roy University of Maine, [email protected] Follow this and additional works at: https://digitalcommons.library.umaine.edu/etd Recommended Citation Roy, Christopher, "The Colonization of a Multi-functional Artificial Reef Designed for the American Lobster, Homarus Americanus" (2020). Electronic Theses and Dissertations. 3205. https://digitalcommons.library.umaine.edu/etd/3205 This Open-Access Thesis is brought to you for free and open access by DigitalCommons@UMaine. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of DigitalCommons@UMaine. For more information, please contact [email protected]. THE COLONIZATION OF A MULTIFUNCTIONAL ARTIFICIAL REEF DESIGNED FOR THE AMERICAN LOBSTER, HOMARUS AMERICANUS By Christopher Roy A.A. University of Maine, Augusta, ME. 2006 B.S. University of Maine, 2004 A THESIS SuBmitted in Partial Fulfillment of the Requirements for the Degree of Master of Science (in Animal Science) The Graduate School The University of Maine May 2020 Advisory Committee: Robert Bayer, Professor of Food and Agriculture, ADvisor Ian Bricknell, Professor of Marine Sciences Timothy BowDen, Associate Professor of Aquaculture © 2020 Christopher Roy All Rights ReserveD ii THE COLONIZATION OF A MULTIFUNCTIONAL ARTIFICIAL REEF DESIGNED FOR THE AMERICAN LOBSTER, HOMARUS AMERICANUS By Christopher Roy Thesis Advisor: Dr. Bob Bayer An Abstract of the Thesis Presented in Partial Fulfillment of the Requirements for the Degree of Master of Science (Animal Science) May 2020 HaBitat loss anD DegraDation causeD By the installation of infrastructure relateD to coastal population increase removes vital habitat necessary in the lifecycles of benthic and epibenthic species.