Targeting Sickle Cell Disease Root-Cause Pathophysiology With
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Diagnosis of Sickle Cell Disease and HBB Haplotyping in the Era of Personalized Medicine: Role of Next Generation Sequencing
Journal of Personalized Medicine Article Diagnosis of Sickle Cell Disease and HBB Haplotyping in the Era of Personalized Medicine: Role of Next Generation Sequencing Adekunle Adekile 1,*, Nagihan Akbulut-Jeradi 2, Rasha Al Khaldi 2, Maria Jinky Fernandez 2 and Jalaja Sukumaran 1 1 Department of Pediatrics, Faculty of Medicine, Kuwait University, P.O. Box 24923, Safat 13110, Kuwait; jalajasukumaran@hotmail 2 Advanced Technology Company, Hawali 32060, Kuwait; [email protected] (N.A.-J.); [email protected] (R.A.); [email protected] (M.J.F.) * Correspondence: [email protected]; Tel.: +965-253-194-86 Abstract: Hemoglobin genotype and HBB haplotype are established genetic factors that modify the clinical phenotype in sickle cell disease (SCD). Current methods of establishing these two factors are cumbersome and/or prone to errors. The throughput capability of next generation sequencing (NGS) makes it ideal for simultaneous interrogation of the many genes of interest in SCD. This study was designed to confirm the diagnosis in patients with HbSS and Sβ-thalassemia, identify any ß-thal mutations and simultaneously determine the ßS HBB haplotype. Illumina Ampliseq custom DNA panel was used to genotype the DNA samples. Haplotyping was based on the alleles on five haplotype-specific SNPs. The patients studied included 159 HbSS patients and 68 Sβ-thal patients, previously diagnosed using high performance liquid chromatography (HPLC). There was Citation: Adekile, A.; considerable discordance between HPLC and NGS results, giving a false +ve rate of 20.5% with a S Akbulut-Jeradi, N.; Al Khaldi, R.; sensitivity of 79% for the identification of Sβthal. -
18,8 Quaternary Structure of Proteins
570 CHAPTERt8 Amino Acids,Peptides, and Proteins 18,8Quaternary structure of proteins AIMS: Todefine the termssubunit dnd quaternarystructure. Io describethe quoternorystructure of hemoglobin.To distinguishomong oxyhemoglobin,deoxyhemoglobin, ond methemoglobin. Someproteins consist of more than one pollpeptide chain. Theseindiuid- ual chains are calledsubunits of the protein. Proteins composedof subunits In some proteins, polypeptide are said to haue quaternary structure. Many proteins have structures that chains aggregateto form contain subunits. Proteins consistingof dimers (two subunits), tetramers quaternary structures. (four subunits), and hexamers (six subunits) are fairly common. The pro- teins that comprise the individual subunits may be identical, or they may be different. Like the secondary and tertiary structures, the quaternary structure of a protein is determined by its primary structure. The pollpep- tide chains of subunits are held in place by the same forces that determine tertiary structure-hydrogen bonds, salt bridges, and sometimes disulfide bridges-except the forces are betweenthe polypeptide chains of the sub- units instead of within them. Hydrophobic aliphatic and aromatic side chains of subunits can aggregateto exclude water. Hemoglobin-the globular oxygen-transport protein of blood-is an example of a protein that has a quaternary structure. Max Perutz, also of the Medical ResearchCouncil laboratories,determined the structure of horse blood hemoglobin in 1959.Hemoglobin is a larger molecule than myoglo- bin. The hemoglobin molecule has a molar mass of 64,500.It contains about 5000 individual atoms, excluding hydrogens, in 574 amino acid residues. The quaternary structure of hemoglobin consistsof four peptide sub- units. TWo of the subunits are identical and are called the alpha subunits. -
The History of Carbon Monoxide Intoxication
medicina Review The History of Carbon Monoxide Intoxication Ioannis-Fivos Megas 1 , Justus P. Beier 2 and Gerrit Grieb 1,2,* 1 Department of Plastic Surgery and Hand Surgery, Gemeinschaftskrankenhaus Havelhoehe, Kladower Damm 221, 14089 Berlin, Germany; fi[email protected] 2 Burn Center, Department of Plastic Surgery and Hand Surgery, University Hospital RWTH Aachen, Pauwelsstrasse 30, 52074 Aachen, Germany; [email protected] * Correspondence: [email protected] Abstract: Intoxication with carbon monoxide in organisms needing oxygen has probably existed on Earth as long as fire and its smoke. What was observed in antiquity and the Middle Ages, and usually ended fatally, was first successfully treated in the last century. Since then, diagnostics and treatments have undergone exciting developments, in particular specific treatments such as hyperbaric oxygen therapy. In this review, different historic aspects of the etiology, diagnosis and treatment of carbon monoxide intoxication are described and discussed. Keywords: carbon monoxide; CO intoxication; COHb; inhalation injury 1. Introduction and Overview Intoxication with carbon monoxide in organisms needing oxygen for survival has probably existed on Earth as long as fire and its smoke. Whenever the respiratory tract of living beings comes into contact with the smoke from a flame, CO intoxication and/or in- Citation: Megas, I.-F.; Beier, J.P.; halation injury may take place. Although the therapeutic potential of carbon monoxide has Grieb, G. The History of Carbon also been increasingly studied in recent history [1], the toxic effects historically dominate a Monoxide Intoxication. Medicina 2021, 57, 400. https://doi.org/10.3390/ much longer period of time. medicina57050400 As a colorless, odorless and tasteless gas, CO is produced by the incomplete combus- tion of hydrocarbons and poses an invisible danger. -
The Role of Methemoglobin and Carboxyhemoglobin in COVID-19: a Review
Journal of Clinical Medicine Review The Role of Methemoglobin and Carboxyhemoglobin in COVID-19: A Review Felix Scholkmann 1,2,*, Tanja Restin 2, Marco Ferrari 3 and Valentina Quaresima 3 1 Biomedical Optics Research Laboratory, Department of Neonatology, University Hospital Zurich, University of Zurich, 8091 Zurich, Switzerland 2 Newborn Research Zurich, Department of Neonatology, University Hospital Zurich, University of Zurich, 8091 Zurich, Switzerland; [email protected] 3 Department of Life, Health and Environmental Sciences, University of L’Aquila, 67100 L’Aquila, Italy; [email protected] (M.F.); [email protected] (V.Q.) * Correspondence: [email protected]; Tel.: +41-4-4255-9326 Abstract: Following the outbreak of a novel coronavirus (SARS-CoV-2) associated with pneumonia in China (Corona Virus Disease 2019, COVID-19) at the end of 2019, the world is currently facing a global pandemic of infections with SARS-CoV-2 and cases of COVID-19. Since severely ill patients often show elevated methemoglobin (MetHb) and carboxyhemoglobin (COHb) concentrations in their blood as a marker of disease severity, we aimed to summarize the currently available published study results (case reports and cross-sectional studies) on MetHb and COHb concentrations in the blood of COVID-19 patients. To this end, a systematic literature research was performed. For the case of MetHb, seven publications were identified (five case reports and two cross-sectional studies), and for the case of COHb, three studies were found (two cross-sectional studies and one case report). The findings reported in the publications show that an increase in MetHb and COHb can happen in COVID-19 patients, especially in critically ill ones, and that MetHb and COHb can increase to dangerously high levels during the course of the disease in some patients. -
Thalassemia, Hemophilia & Sickle Cell Disease
10/22/2018 Global Best Practices in Care, Rehabilitation and Research Thalassemia Syndrome Blood Disorders (Thalassemia, Hemophilia & Sickle Cell Disease) Dr. J.S. Arora Thalassemialogist 7% of the world population MSc in Haemoglobinopathy University College London Carry Thalassemia/Hb’pathy gene General secretary: National Thalassemia Welfare Society Federation of Indian Thalassemics Member Ethics Committee: 400 million heterozygous carriers IIT Delhi Lady Hardinge Medical College and Associated Hospitals, New Delhi ITS Dental College Hospital & Research Centre, Greater NOIDA 3,00,000-4,00,000 babies with severe Founder Member: Indian Alliance of Patient Groups haemoglobinopathies born each year. Founding Trustee: Genomics And Public Health Foundation Formerly Coordinator Thalassemia Cell Govt. of Delhi Member Advisory Committee - D D U Hospital Govt. of Delhi INDIA , THAILAND AND INDONESIA “Life Time Service Award” from PHO Chambers of IAP ► 50% OF WORLD’S THALASSAEMIA CARRIERS Patients for Patient Safety (PFPS) Champion India Member: Patients for Patient Safety Advisory Group ► 50% OF THALASSAEMIA MAJORS [email protected] β Thalassemia Who are affected 100 million carriers of β Thalassemia. More than 100,000 Thalassemia Major born/year India • thalassemia : Carrier rate 1% - 17% (mean 3.9%) more prevalent in certain communities. 50 million carriers, Over 12,000 affected born every year. • Sickle Cell Disease : common in tribes carrier rate as high as 40% in some areas • HbE : Highly prevalent in West Bengal & North Eastern -
Bone Marrow (Stem Cell) Transplant for Sickle Cell Disease Bone Marrow (Stem Cell) Transplant
Bone Marrow (Stem Cell) Transplant for Sickle Cell Disease Bone Marrow (Stem Cell) Transplant for Sickle Cell Disease 1 Produced by St. Jude Children’s Research Hospital Departments of Hematology, Patient Education, and Biomedical Communications. Funds were provided by St. Jude Children’s Research Hospital, ALSAC, and a grant from the Plough Foundation. This document is not intended to take the place of the care and attention of your personal physician. Our goal is to promote active participation in your care and treatment by providing information and education. Questions about individual health concerns or specifi c treatment options should be discussed with your physician. For more general information on sickle cell disease, please visit our Web site at www.stjude.org/sicklecell. Copyright © 2009 St. Jude Children’s Research Hospital How did bone marrow (stem cell) transplants begin for children with sickle cell disease? Bone marrow (stem cell) transplants have been used for the treatment and cure of a variety of cancers, immune system diseases, and blood diseases for many years. Doctors in the United States and other countries have developed studies to treat children who have severe sickle cell disease with bone marrow (stem cell) transplants. How does a bone marrow (stem cell) transplant work? 2 In a person with sickle cell disease, the bone marrow produces red blood cells that contain hemoglobin S. This leads to the complications of sickle cell disease. • To prepare for a bone marrow (stem cell) transplant, strong medicines, called chemotherapy, are used to weaken or destroy the patient’s own bone marrow, stem cells, and infection fi ghting system. -
Elevated Carboxyhemoglobin in a Marine Mammal, the Northern
© 2014. Published by The Company of Biologists Ltd | The Journal of Experimental Biology (2014) 217, 1752-1757 doi:10.1242/jeb.100677 RESEARCH ARTICLE Elevated carboxyhemoglobin in a marine mammal, the northern elephant seal Michael S. Tift1,2,*, Paul J. Ponganis1 and Daniel E. Crocker2 ABSTRACT storage capacity (decreased arterial O2 content), thus limiting Low concentrations of endogenous carbon monoxide (CO), mitochondrial respiration. However, CO is also generated generated primarily through degradation of heme from heme- endogenously in low concentrations, and functions in proteins, have been shown to maintain physiological function of neurotransmission and in protection of tissues and cells against organs and to exert cytoprotective effects. However, high inflammation, apoptosis and ischemia–reperfusion injuries (Snyder concentrations of carboxyhemoglobin (COHb), formed by CO binding et al., 1998; Kevin and Laffey, 2008; Mustafa et al., 2009; Kajimura to hemoglobin, potentially prevent adequate O2 delivery to tissues by et al., 2010; Prabhakar, 2012). Therefore, low concentrations of CO lowering arterial O2 content. Elevated heme-protein concentrations, can provide beneficial and therapeutic effects up to a specific as found in marine mammals, are likely associated with greater heme concentration, at which elevated CO then leads to detrimental effects degradation, more endogenous CO production and, consequently, from reduced O2 delivery. These relatively recent findings give CO elevated COHb concentrations. Therefore, we measured COHb in a new functional perspective and emphasize the importance of elephant seals, a species with large blood volumes and elevated understanding the biological effects of specific CO concentrations hemoglobin and myoglobin concentrations. The levels of COHb were in the body which can be viewed as therapeutic. -
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Acta Biomed 2021; Vol. 92, N. 1: e2021169 DOI: 10.23750/abm.v92i1.11345 © Mattioli 1885 Update of adolescent medicine (Editor: Vincenzo De Sanctis) Rare anemias in adolescents Joan-Lluis Vives Corrons, Elena Krishnevskaya Red Blood Cell Pathology and Hematopoietic Disorders (Rare Anaemias Unit) Institute for Leukaemia Research Josep Car- reras (IJC). Badalona (Barcelona) Abstract. Anemia can be the consequence of a single disease or an expression of external factors mainly nutritional deficiencies. Genetic issues are important in the primary care of adolescents because a genetic diagnosis may not be made until adolescence, when the teenager presents with the first signs or symptoms of the condition. This situation is relatively frequent for rare anemias (RA) an important, and relatively heteroge- neous group of rare diseases (RD) where anaemia is the first and most relevant clinical manifestation. RA are characterised by their low prevalence (< 5 cases per 10,000 individuals), and, in some cases, by their complex mechanism. For these reasons, RA are little known, even among health professionals, and patients tend to re- main undiagnosed or misdiagnosed for long periods of time, making impossible to know the prognosis of the disease, or to carry out genetic counselling for future pregnancies. Since this situation is an important cause of anxiety for both adolescent patients and their families, the physician’s knowledge of the natural history of a genetic disease will be the key factor for the anticipatory guidance for diagnosis and clinical follow-up. RA can be due to three primary causes: 1. Bone marrow erythropoietic defects, 2. Excessive destruction of mature red blood cells (hemolysis), and 3. -
Alpha Thalassemia Trait
Alpha Thalassemia Trait Alpha Thalassemia Trait Produced by St. Jude Children’s Research Hospital, Departments of Hematology, Patient Education, 1 and Biomedical Communications. Funds were provided by St. Jude Children’s Research Hospital, ALSAC, and a grant from the Plough Foundation. This document is not intended to replace counseling by a trained health care professional or genetic counselor. Our aim is to promote active participation in your care and treatment by providing information and education. Questions about individual health concerns or specific treatment options should be discussed with your doctor. For general information on sickle cell disease and other blood disorders, please visit our Web site at www.stjude.org/sicklecell. Copyright © 2009 St. Jude Children’s Research Hospital Alpha thalassemia trait All red blood cells contain hemoglobin (HEE muh glow bin), which carries oxygen from your lungs to all parts of your body. Alpha thalassemia (thal uh SEE mee uh) trait is a condition that affects the amount of hemo- globin in the red blood cells. • Adult hemoglobin (hemoglobin A) is made of alpha and beta globins. • Normally, people have 4 genes for alpha globin with 2 genes on each chromosome (aa/aa). People with alpha thalassemia trait only have 2 genes for alpha globin, so their bodies make slightly less hemoglobin than normal. This trait was passed on from their parents, like hair color or eye color. A trait is different from a disease 2 Alpha thalassemia trait is not a disease. Normally, a trait will not make you sick. Parents who have alpha thalassemia trait can pass it on to their children. -
The Voice of the Patient: Sickle Cell Report
The Voice of the Patient A series of reports from the U.S. Food and Drug Administration’s (FDA’s) Patient-Focused Drug Development Initiative Sickle Cell Disease Public Meeting: February 7, 2014 Report Date: October 2014 Center for Drug Evaluation and Research (CDER) and Center for Biologics Evaluation and Research (CBER) U.S. Food and Drug Administration (FDA) Table of Contents Introduction ......................................................................................................................................3 Meeting overview ..................................................................................................................................... 3 Report overview and key themes ............................................................................................................. 4 Topic 1: The Effects of Sickle Cell Disease That Matter Most to Patients ..............................................6 Pediatric and young adult perspective on the effects of sickle cell disease ............................................. 6 Adult perspective on the effects of sickle cell disease ........................................................................... 10 Topic 2: Patient Perspectives on Treatments for Sickle Cell Disease and Participation in Clinical Trials 12 Sickle cell disease treatments ................................................................................................................. 13 Non-drug therapies ................................................................................................................................ -
What Are the Health Effects from Exposure to Carbon Monoxide?
CO Lesson 2 CARBON MONOXIDE: LESSON TWO What are the Health Effects from Exposure to Carbon Monoxide? LESSON SUMMARY Carbon monoxide (CO) is an odorless, tasteless, colorless and nonirritating Grade Level: 9 – 12 gas that is impossible to detect by an exposed person. CO is produced by the Subject(s) Addressed: incomplete combustion of carbon-based fuels, including gas, wood, oil and Science, Biology coal. Exposure to CO is the leading cause of fatal poisonings in the United Class Time: 1 Period States and many other countries. When inhaled, CO is readily absorbed from the lungs into the bloodstream, where it binds tightly to hemoglobin in the Inquiry Category: Guided place of oxygen. CORE UNDERSTANDING/OBJECTIVES By the end of this lesson, students will have a basic understanding of the physiological mechanisms underlying CO toxicity. For specific learning and standards addressed, please see pages 30 and 31. MATERIALS INCORPORATION OF TECHNOLOGY Computer and/or projector with video capabilities INDIAN EDUCATION FOR ALL Fires utilizing carbon-based fuels, such as wood, produce carbon monoxide as a dangerous byproduct when the combustion is incomplete. Fire was important for the survival of early Native American tribes. The traditional teepees were well designed with sophisticated airflow patterns, enabling fires to be contained within the shelter while minimizing carbon monoxide exposure. However, fire was used for purposes other than just heat and cooking. According to the historian Henry Lewis, Native Americans used fire to aid in hunting, crop management, insect collection, warfare and many other activities. Today, fire is used to heat rocks used in sweat lodges. -
Stability of Carboxyhaemoglobin in Blood Samples at Different Periods
linica f C l To o x l ic a o n r l o u g o y Ghanem, J Clinic Toxicol 2012, 2:8 J Journal of Clinical Toxicology DOI: 10.4172/2161-0495.1000144 ISSN: 2161-0495 Research Article Article OpenOpen Access Access Stability of Carboxyhaemoglobin in Blood Samples at Different Periods and Temperatures: A Forensic and Toxicological Tool for Diagnosis Abdel-Aziz Abou El-Fotouh Ghanem, Rania Hamed Abdel Rahman* and Osama A Shabka Department of Forensic Medicine and Clinical Toxicology, Faculty of Medicine, Mansoura University, Egypt Abstract Carbon monoxide (CO) is one of the most toxic agents in clinical and forensic practices. Diagnosis of CO poisoning is a challenging task and needs a high level of suspicion. Carboxyhaemoglobin (COHb) level is considered the only established marker for diagnosis. The current work aims to determine the levels of COHb in blood samples collected from CO poisoned patients on admission and to re-estimate those levels after storage of samples for different periods and after incubation at various temperatures. The results showed that the mean concentrations of carboxyhaemoglobin at time of admission=23.05 ± 13.44. Levels demonstrated insignificant change after either refrigerated storage of samples for different periods (one, two and three years) or after their incubation at different temperatures (37°C, 40°C and 50°C). It can be concluded that COHb concentration remains stable in refrigerated stored blood samples for up to 3 years as well as those present in high temperatures. It is recommended to immediately collect and store blood samples from patients suspicious of CO poisoning.