Templates for the Solution of Linear Systems: Building Blocks for Iterative Methods1
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18.06 Linear Algebra, Problem Set 2 Solutions
18.06 Problem Set 2 Solution Total: 100 points Section 2.5. Problem 24: Use Gauss-Jordan elimination on [U I] to find the upper triangular −1 U : 2 3 2 3 2 3 1 a b 1 0 0 −1 4 5 4 5 4 5 UU = I 0 1 c x1 x2 x3 = 0 1 0 : 0 0 1 0 0 1 −1 Solution (4 points): Row reduce [U I] to get [I U ] as follows (here Ri stands for the ith row): 2 3 2 3 1 a b 1 0 0 (R1 = R1 − aR2) 1 0 b − ac 1 −a 0 4 5 4 5 0 1 c 0 1 0 −! (R2 = R2 − cR2) 0 1 0 0 1 −c 0 0 1 0 0 1 0 0 1 0 0 1 ( ) 2 3 R1 = R1 − (b − ac)R3 1 0 0 1 −a ac − b −! 40 1 0 0 1 −c 5 : 0 0 1 0 0 1 Section 2.5. Problem 40: (Recommended) A is a 4 by 4 matrix with 1's on the diagonal and −1 −a; −b; −c on the diagonal above. Find A for this bidiagonal matrix. −1 Solution (12 points): Row reduce [A I] to get [I A ] as follows (here Ri stands for the ith row): 2 3 1 −a 0 0 1 0 0 0 6 7 60 1 −b 0 0 1 0 07 4 5 0 0 1 −c 0 0 1 0 0 0 0 1 0 0 0 1 2 3 (R1 = R1 + aR2) 1 0 −ab 0 1 a 0 0 6 7 (R2 = R2 + bR2) 60 1 0 −bc 0 1 b 07 −! 4 5 (R3 = R3 + cR4) 0 0 1 0 0 0 1 c 0 0 0 1 0 0 0 1 2 3 (R1 = R1 + abR3) 1 0 0 0 1 a ab abc (R = R + bcR ) 60 1 0 0 0 1 b bc 7 −! 2 2 4 6 7 : 40 0 1 0 0 0 1 c 5 0 0 0 1 0 0 0 1 Alternatively, write A = I − N. -
[Math.RA] 19 Jun 2003 Two Linear Transformations Each Tridiagonal with Respect to an Eigenbasis of the Ot
Two linear transformations each tridiagonal with respect to an eigenbasis of the other; comments on the parameter array∗ Paul Terwilliger Abstract Let K denote a field. Let d denote a nonnegative integer and consider a sequence ∗ K p = (θi,θi , i = 0...d; ϕj , φj, j = 1...d) consisting of scalars taken from . We call p ∗ ∗ a parameter array whenever: (PA1) θi 6= θj, θi 6= θj if i 6= j, (0 ≤ i, j ≤ d); (PA2) i−1 θh−θd−h ∗ ∗ ϕi 6= 0, φi 6= 0 (1 ≤ i ≤ d); (PA3) ϕi = φ1 + (θ − θ )(θi−1 − θ ) h=0 θ0−θd i 0 d i−1 θh−θd−h ∗ ∗ (1 ≤ i ≤ d); (PA4) φi = ϕ1 + (Pθ − θ )(θd−i+1 − θ0) (1 ≤ i ≤ d); h=0 θ0−θd i 0 −1 ∗ ∗ ∗ ∗ −1 (PA5) (θi−2 − θi+1)(θi−1 − θi) P, (θi−2 − θi+1)(θi−1 − θi ) are equal and independent of i for 2 ≤ i ≤ d − 1. In [13] we showed the parameter arrays are in bijection with the isomorphism classes of Leonard systems. Using this bijection we obtain the following two characterizations of parameter arrays. Assume p satisfies PA1, PA2. Let ∗ ∗ A, B, A ,B denote the matrices in Matd+1(K) which have entries Aii = θi, Bii = θd−i, ∗ ∗ ∗ ∗ ∗ ∗ Aii = θi , Bii = θi (0 ≤ i ≤ d), Ai,i−1 = 1, Bi,i−1 = 1, Ai−1,i = ϕi, Bi−1,i = φi (1 ≤ i ≤ d), and all other entries 0. We show the following are equivalent: (i) p satisfies −1 PA3–PA5; (ii) there exists an invertible G ∈ Matd+1(K) such that G AG = B and G−1A∗G = B∗; (iii) for 0 ≤ i ≤ d the polynomial i ∗ ∗ ∗ ∗ ∗ ∗ (λ − θ0)(λ − θ1) · · · (λ − θn−1)(θi − θ0)(θi − θ1) · · · (θi − θn−1) ϕ1ϕ2 · · · ϕ nX=0 n is a scalar multiple of the polynomial i ∗ ∗ ∗ ∗ ∗ ∗ (λ − θd)(λ − θd−1) · · · (λ − θd−n+1)(θ − θ )(θ − θ ) · · · (θ − θ ) i 0 i 1 i n−1 . -
Overview of Iterative Linear System Solver Packages
Overview of Iterative Linear System Solver Packages Victor Eijkhout July, 1998 Abstract Description and comparison of several packages for the iterative solu- tion of linear systems of equations. 1 1 Intro duction There are several freely available packages for the iterative solution of linear systems of equations, typically derived from partial di erential equation prob- lems. In this rep ort I will give a brief description of a numberofpackages, and giveaninventory of their features and de ning characteristics. The most imp ortant features of the packages are which iterative metho ds and preconditioners supply; the most relevant de ning characteristics are the interface they present to the user's data structures, and their implementation language. 2 2 Discussion Iterative metho ds are sub ject to several design decisions that a ect ease of use of the software and the resulting p erformance. In this section I will give a global discussion of the issues involved, and how certain p oints are addressed in the packages under review. 2.1 Preconditioners A go o d preconditioner is necessary for the convergence of iterative metho ds as the problem to b e solved b ecomes more dicult. Go o d preconditioners are hard to design, and this esp ecially holds true in the case of parallel pro cessing. Here is a short inventory of the various kinds of preconditioners found in the packages reviewed. 2.1.1 Ab out incomplete factorisation preconditioners Incomplete factorisations are among the most successful preconditioners devel- op ed for single-pro cessor computers. Unfortunately, since they are implicit in nature, they cannot immediately b e used on parallel architectures. -
Self-Interlacing Polynomials Ii: Matrices with Self-Interlacing Spectrum
SELF-INTERLACING POLYNOMIALS II: MATRICES WITH SELF-INTERLACING SPECTRUM MIKHAIL TYAGLOV Abstract. An n × n matrix is said to have a self-interlacing spectrum if its eigenvalues λk, k = 1; : : : ; n, are distributed as follows n−1 λ1 > −λ2 > λ3 > ··· > (−1) λn > 0: A method for constructing sign definite matrices with self-interlacing spectra from totally nonnegative ones is presented. We apply this method to bidiagonal and tridiagonal matrices. In particular, we generalize a result by O. Holtz on the spectrum of real symmetric anti-bidiagonal matrices with positive nonzero entries. 1. Introduction In [5] there were introduced the so-called self-interlacing polynomials. A polynomial p(z) is called self- interlacing if all its roots are real, semple and interlacing the roots of the polynomial p(−z). It is easy to see that if λk, k = 1; : : : ; n, are the roots of a self-interlacing polynomial, then the are distributed as follows n−1 (1.1) λ1 > −λ2 > λ3 > ··· > (−1) λn > 0; or n (1.2) − λ1 > λ2 > −λ3 > ··· > (−1) λn > 0: The polynomials whose roots are distributed as in (1.1) (resp. in (1.2)) are called self-interlacing of kind I (resp. of kind II). It is clear that a polynomial p(z) is self-interlacing of kind I if, and only if, the polynomial p(−z) is self-interlacing of kind II. Thus, it is enough to study self-interlacing of kind I, since all the results for self-interlacing of kind II will be obtained automatically. Definition 1.1. An n × n matrix is said to possess a self-interlacing spectrum if its eigenvalues λk, k = 1; : : : ; n, are real, simple, are distributed as in (1.1). -
Krylov Subspaces
Lab 1 Krylov Subspaces Lab Objective: Discuss simple Krylov Subspace Methods for finding eigenvalues and show some interesting applications. One of the biggest difficulties in computational linear algebra is the amount of memory needed to store a large matrix and the amount of time needed to read its entries. Methods using Krylov subspaces avoid this difficulty by studying how a matrix acts on vectors, making it unnecessary in many cases to create the matrix itself. More specifically, we can construct a Krylov subspace just by knowing how a linear transformation acts on vectors, and with these subspaces we can closely approximate eigenvalues of the transformation and solutions to associated linear systems. The Arnoldi iteration is an algorithm for finding an orthonormal basis of a Krylov subspace. Its outputs can also be used to approximate the eigenvalues of the original matrix. The Arnoldi Iteration The order-N Krylov subspace of A generated by x is 2 n−1 Kn(A; x) = spanfx;Ax;A x;:::;A xg: If the vectors fx;Ax;A2x;:::;An−1xg are linearly independent, then they form a basis for Kn(A; x). However, this basis is usually far from orthogonal, and hence computations using this basis will likely be ill-conditioned. One way to find an orthonormal basis for Kn(A; x) would be to use the modi- fied Gram-Schmidt algorithm from Lab TODO on the set fx;Ax;A2x;:::;An−1xg. More efficiently, the Arnold iteration integrates the creation of fx;Ax;A2x;:::;An−1xg with the modified Gram-Schmidt algorithm, returning an orthonormal basis for Kn(A; x). -
Accelerating the LOBPCG Method on Gpus Using a Blocked Sparse Matrix Vector Product
Accelerating the LOBPCG method on GPUs using a blocked Sparse Matrix Vector Product Hartwig Anzt and Stanimire Tomov and Jack Dongarra Innovative Computing Lab University of Tennessee Knoxville, USA Email: [email protected], [email protected], [email protected] Abstract— the computing power of today’s supercomputers, often accel- erated by coprocessors like graphics processing units (GPUs), This paper presents a heterogeneous CPU-GPU algorithm design and optimized implementation for an entire sparse iter- becomes challenging. ative eigensolver – the Locally Optimal Block Preconditioned Conjugate Gradient (LOBPCG) – starting from low-level GPU While there exist numerous efforts to adapt iterative lin- data structures and kernels to the higher-level algorithmic choices ear solvers like Krylov subspace methods to coprocessor and overall heterogeneous design. Most notably, the eigensolver technology, sparse eigensolvers have so far remained out- leverages the high-performance of a new GPU kernel developed side the main focus. A possible explanation is that many for the simultaneous multiplication of a sparse matrix and a of those combine sparse and dense linear algebra routines, set of vectors (SpMM). This is a building block that serves which makes porting them to accelerators more difficult. Aside as a backbone for not only block-Krylov, but also for other from the power method, algorithms based on the Krylov methods relying on blocking for acceleration in general. The subspace idea are among the most commonly used general heterogeneous LOBPCG developed here reveals the potential of eigensolvers [1]. When targeting symmetric positive definite this type of eigensolver by highly optimizing all of its components, eigenvalue problems, the recently developed Locally Optimal and can be viewed as a benchmark for other SpMM-dependent applications. -
Accurate Singular Values of Bidiagonal Matrices
d d Accurate Singular Values of Bidiagonal Matrices (Appeared in the SIAM J. Sci. Stat. Comput., v. 11, n. 5, pp. 873-912, 1990) James Demmel W. Kahan Courant Institute Computer Science Division 251 Mercer Str. University of California New York, NY 10012 Berkeley, CA 94720 Abstract Computing the singular values of a bidiagonal matrix is the ®nal phase of the standard algo- rithm for the singular value decomposition of a general matrix. We present a new algorithm which computes all the singular values of a bidiagonal matrix to high relative accuracy indepen- dent of their magnitudes. In contrast, the standard algorithm for bidiagonal matrices may com- pute sm all singular values with no relative accuracy at all. Numerical experiments show that the new algorithm is comparable in speed to the standard algorithm, and frequently faster. Keywords: singular value decomposition, bidiagonal matrix, QR iteration AMS(MOS) subject classi®cations: 65F20, 65G05, 65F35 1. Introduction The standard algorithm for computing the singular value decomposition (SVD ) of a gen- eral real matrix A has two phases [7]: = T 1) Compute orthogonal matrices P 11and Q such that B PAQ 11is in bidiagonal form, i.e. has nonzero entries only on its diagonal and ®rst superdiagonal. Σ= T 2) Compute orthogonal matrices P 22and Q such that PBQ 22is diagonal and nonnega- σ Σ tive. The diagonal entries i of are the singular values of A. We will take them to be σ≥σ = sorted in decreasing order: ii+112. The columns of Q QQ are the right singular vec- = tors,andthecolumnsofP PP12are the left singular vectors. -
Jacobi-Davidson, Gauss-Seidel and Successive Over-Relaxation For
Applied Mathematics and Computational Intelligence Volume 6, 2017 [41-52] Jacobi‐Davidson, Gauss‐Seidel and Successive Over‐Relaxation for Solving Systems of Linear Equations Fatini Dalili Mohammed1,a and Mohd Rivaieb 1Department of Computer Sciences and Mathematics, Universiti Teknologi MARA (UiTM) Terengganu, Campus Kuala Terengganu, Malaysia ABSTRACT Linear systems are applied in many applications such as calculating variables, rates, budgets, making a prediction and others. Generally, there are two techniques of solving system of linear equation including direct methods and iterative methods. Some basic solution methods known as direct methods are ineffective in solving many equations in large systems due to slower computation. Due to inability of direct methods, iterative methods are practical to be used in large systems of linear equations as they do not need much storage. In this project, three indirect methods are used to solve large system of linear equations. The methods are Jacobi Davidson, Gauss‐Seidel and Successive Over‐ Relaxation (SOR) which are well known in the field of numerical analysis. The comparative results analysis of the three methods is considered. These three methods are compared based on number of iterations, CPU time and error. The numerical results show that Gauss‐Seidel method and SOR method with ω=1.25 are more efficient than others. This research allows researcher to appreciate the use of iterative techniques for solving systems of linear equations that is widely used in industrial applications. Keywords: system of linear equation, iterative method, Jacobi‐Davidson, Gauss‐Seidel, Successive Over‐Relaxation 1. INTRODUCTION Linear systems are important in our real life. They are applied in various applications such as in calculating variables, rates, budgets, making a prediction and others. -
A Study on Comparison of Jacobi, Gauss-Seidel and Sor Methods For
International Journal of Mathematics Trends and Technology (IJMTT) – Volume 56 Issue 4- April 2018 A Study on Comparison of Jacobi, Gauss- Seidel and Sor Methods for the Solution in System of Linear Equations #1 #2 #3 *4 Dr.S.Karunanithi , N.Gajalakshmi , M.Malarvizhi , M.Saileshwari #Assistant Professor ,* Research Scholar Thiruvalluvar University,Vellore PG & Research Department of Mathematics,Govt.Thirumagal Mills College,Gudiyattam,Vellore Dist,Tamilnadu,India-632602 Abstract — This paper presents three iterative methods for the solution of system of linear equations has been evaluated in this work. The result shows that the Successive Over-Relaxation method is more efficient than the other two iterative methods, number of iterations required to converge to an exact solution. This research will enable analyst to appreciate the use of iterative techniques for understanding the system of linear equations. Keywords — The system of linear equations, Iterative methods, Initial approximation, Jacobi method, Gauss- Seidel method, Successive Over- Relaxation method. 1. INTRODUCTION AND PRELIMINARIES Numerical analysis is the area of mathematics and computer science that creates, analyses, and implements algorithms for solving numerically the problems of continuous mathematics. Such problems originate generally from real-world applications of algebra, geometry and calculus, and they involve variables which vary continuously. These problems occur throughout the natural sciences, social science, engineering, medicine, and business. The solution of system of linear equations can be accomplished by a numerical method which falls in one of two categories: direct or iterative methods. We have so far discussed some direct methods for the solution of system of linear equations and we have seen that these methods yield the solution after an amount of computation that is known advance. -
Design and Evaluation of Tridiagonal Solvers for Vector and Parallel Computers Universitat Politècnica De Catalunya
Design and Evaluation of Tridiagonal Solvers for Vector and Parallel Computers Author: Josep Lluis Larriba Pey Advisor: Juan José Navarro Guerrero Barcelona, January 1995 UPC Universitat Politècnica de Catalunya Departament d'Arquitectura de Computadors UNIVERSITAT POLITÈCNICA DE CATALU NYA B L I O T E C A X - L I B R I S Tesi doctoral presentada per Josep Lluis Larriba Pey per tal d'aconseguir el grau de Doctor en Informàtica per la Universitat Politècnica de Catalunya UNIVERSITAT POLITÈCNICA DE CATAl U>'YA ADA'UNÍIEÏRACÍÓ ;;//..;,3UMPf';S AO\n¿.-v i S -i i::-.« c:¿fCM or,re: iïhcc'a a la pàgina .rf.S# a;; 3 b el r;ú¡; Barcelona, 6 N L'ENCARREGAT DEL REGISTRE. Barcelona, de de 1995 To my wife Marta To my parents Elvira and José Luis "A journey of a thousand miles must begin with a single step" Lao-Tse Acknowledgements I would like to thank my parents, José Luis and Elvira, for their unconditional help and love to me. I will always be indebted to you. I also want to thank my wife, Marta, for being the sparkle in my life, for her support and for understanding my (good) moods. I thank Juanjo, my advisor, for his friendship, patience and good advice. Also, I want to thank Àngel Jorba for his unconditional collaboration, work and support in some of the contributions of this work. I thank the members of "Comissió de Doctorat del DAG" for their comments and specially Miguel Valero for his suggestions on the topics of chapter 4. I thank Mateo Valero for his friendship and always good advice. -
Limited Memory Block Krylov Subspace Optimization for Computing Dominant Singular Value Decompositions
Limited Memory Block Krylov Subspace Optimization for Computing Dominant Singular Value Decompositions Xin Liu∗ Zaiwen Weny Yin Zhangz March 22, 2012 Abstract In many data-intensive applications, the use of principal component analysis (PCA) and other related techniques is ubiquitous for dimension reduction, data mining or other transformational purposes. Such transformations often require efficiently, reliably and accurately computing dominant singular value de- compositions (SVDs) of large unstructured matrices. In this paper, we propose and study a subspace optimization technique to significantly accelerate the classic simultaneous iteration method. We analyze the convergence of the proposed algorithm, and numerically compare it with several state-of-the-art SVD solvers under the MATLAB environment. Extensive computational results show that on a wide range of large unstructured matrices, the proposed algorithm can often provide improved efficiency or robustness over existing algorithms. Keywords. subspace optimization, dominant singular value decomposition, Krylov subspace, eigen- value decomposition 1 Introduction Singular value decomposition (SVD) is a fundamental and enormously useful tool in matrix computations, such as determining the pseudo-inverse, the range or null space, or the rank of a matrix, solving regular or total least squares data fitting problems, or computing low-rank approximations to a matrix, just to mention a few. The need for computing SVDs also frequently arises from diverse fields in statistics, signal processing, data mining or compression, and from various dimension-reduction models of large-scale dynamic systems. Usually, instead of acquiring all the singular values and vectors of a matrix, it suffices to compute a set of dominant (i.e., the largest) singular values and their corresponding singular vectors in order to obtain the most valuable and relevant information about the underlying dataset or system. -
Computing the Moore-Penrose Inverse for Bidiagonal Matrices
УДК 519.65 Yu. Hakopian DOI: https://doi.org/10.18523/2617-70802201911-23 COMPUTING THE MOORE-PENROSE INVERSE FOR BIDIAGONAL MATRICES The Moore-Penrose inverse is the most popular type of matrix generalized inverses which has many applications both in matrix theory and numerical linear algebra. It is well known that the Moore-Penrose inverse can be found via singular value decomposition. In this regard, there is the most effective algo- rithm which consists of two stages. In the first stage, through the use of the Householder reflections, an initial matrix is reduced to the upper bidiagonal form (the Golub-Kahan bidiagonalization algorithm). The second stage is known in scientific literature as the Golub-Reinsch algorithm. This is an itera- tive procedure which with the help of the Givens rotations generates a sequence of bidiagonal matrices converging to a diagonal form. This allows to obtain an iterative approximation to the singular value decomposition of the bidiagonal matrix. The principal intention of the present paper is to develop a method which can be considered as an alternative to the Golub-Reinsch iterative algorithm. Realizing the approach proposed in the study, the following two main results have been achieved. First, we obtain explicit expressions for the entries of the Moore-Penrose inverse of bidigonal matrices. Secondly, based on the closed form formulas, we get a finite recursive numerical algorithm of optimal computational complexity. Thus, we can compute the Moore-Penrose inverse of bidiagonal matrices without using the singular value decomposition. Keywords: Moor-Penrose inverse, bidiagonal matrix, inversion formula, finite recursive algorithm.