Table 1 Osburp Genes Up- and Down-Regulated by DNA Chip Analysis

Supplemental table 1 Comparison of the expression level changes of OsBURP genes under abiotic stresses checked by DNA chip and real-time PCR.

gene Drought stress* Salt stress* Cold stress* * a b c a b c b c OsBURP0 0.580 0.560 1.013 1.017 0.990 0.728 0.870 0.848 V 1 OsBURP0 0.873 0.220 0.137 1.272 0.460 0.554 0.630 0.839 2 al OsBURP0 0.932 1.280 3.823 0.994 1.220 1.248 0.820 0.654 3 u OsBURP0 0.950 n.d. 0.004 0.302 n.d. 8.719 n.d. 1.464 4 es OsBURP0 n.d. n.d. 2.778 n.d. n.d. 19.77 n.d. 3.223 5 OsBURP0 n.d. n.d. 1.972 n.d. n.d. 0.173 n.d. 0.47 6 OsBURP0 n.d. 0.780 1.89 n.d. 0.990 0.697 0.951 0.781 7 OsBURP0 0.642 n.d. 1.016 0.939 n.d. 4.951 n.d. 4.38 8 OsBURP0 n.d. n.d. 1.355 n.d. n.d. 29.895 n.d. 0.623 9 OsBURP1 n.d. n.d. 1.448 1.255 n.d. 23.237 n.d. 1.517 0 OsBURP11 1.306 n.d. 0.623 n.d. n.d. 11.845 n.d. 1.268 OsBURP1 n.d. n.d. 0.222 0.212 n.d. 0.043 n.d. 0.523 2 OsBURP1 1.047 n.d. 0.78 1.689 n.d. 1.443 n.d. 0.574 3 OsBURP1 n.d. n.d. 0.78 n.d. n.d. 42.789 n.d. 1.589 4 OsBURP1 n.d. n.d. 1.495 1.629 n.d. 30.092 NA 1.876 5 OsBURP1 0.912 0.138 0.735 1.735 0.649 2.918 0.496 0.448 6 OsBURP1 n.d. n.d. 0.881 n.d. n.d. 2.155 n.d. 23.54 7 represent the changed folds of expression level based on DNA chip and real-time

PCR. a, DNA chip data from Zhou et al (2007); b, DNA chip data from Jain et al

(2007); c, real-time PCR results from this study. n.d.: no data

Zhou J, Wang X, Jiao Y, Qin Y, Liu X, He K, Chen C, Ma L, Wang J, Xiong L, Zhang Q, Fan L, Deng XW (2007) Global genome expression analysis of rice in

response to drought and high-salinity stresses in shoot, flag leaf, and panicle.

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Khurana JP (2007) F-box proteins in rice. Genome-wide analysis,

classification, temporal and spatial gene expression during panicle and seed

development, and regulation by light and abiotic stress. Plant Physiol 143:

1467–1483