1. Sukesh R. Bhaumik and H. M. Sonawat (1994). Pyruvate Metabolism in Halobacterium Salinarium

Publications:

1. Sukesh R. Bhaumik and H. M. Sonawat (1994). Pyruvate metabolism in Halobacterium salinarium studied by intracellular 13C nuclear magnetic resonance spectroscopy. Journal of Bacteriology 176: 2172-2176.

2. Sukesh R. Bhaumik, K. V. R. Chary, G. Govil, K. Liu and H. T. Miles (1995). NMR characterization of a triple stranded complex formed by homo-purine and homopyrimidine DNA strands at 1:1 molar ratio and acidic pH. Nucleic Acids Research 23: 4116-4121.

3. Sukesh R. Bhaumik (1996). Conformational feasibility of a DNA hairpin with one- base loop. Biochemical and Biophysical Research Communications 220: 853-857.

4. K. V. R. Chary, Sukesh R. Bhaumik, G. Govil, K. Liu and H. T. Miles (1996). DNA strands complementary in parallel orientation, form an antiparallel duplex at neutral pH with A-C, G-T and T-C mismatched base pairs. Progress in Biophysics and Molecular Biology 65: PB 123.

5. Sukesh R. Bhaumik, Anil Saran and G. Govil (1996). PCILO investigations on the conformation of two-base hairpin loop in DNA. Chemical Physics 204: 205-211.

6. Sukesh R. Bhaumik, K. V. R. Chary, G. Govil, K. Liu and H. T. Miles (1996). NMR characterization of a triple stranded complex formed by homo-purine and homopyrimidine DNA strands at 1:1 molar ratio and acidic pH. Progress in Biophysics and Molecular Biology 65: PB 124.

7. Sukesh R. Bhaumik, K. V. R. Chary, G. Govil, K. Liu and H. T. Miles (1997). Homopurine and Homopyrimidine strands complementary in parallel orientation form an antiparallel duplex at neutral pH with A-C, G-T and T-C mismatched base pairs. Biopolymers 41: 773-784.

8. Sukesh R. Bhaumik, K. V. R. Chary, G. Govil, K. Liu and H. T. Miles (1998). A novel palindromic triple-stranded structure formed by homopyrimidine dodecamer d- CTTCTCCTCTTC and homopurine hexane d-GAAGAG. Nucleic Acids Research 26: 2981-2988. 9. Sukesh R. Bhaumik and K. V. R. Chary (1998). A-C mismatched base pairing in DNA. Current Science (India) 74: 1008-1012.

10. Sukesh R. Bhaumik, K. V. R. Chary and G. Govil (1998). Molecular mechanics calculations on a triple stranded DNA involving C.G-T and T.A -C mismatched base triples. Journal of Biomolecular Structure and Dynamics 16: 527-534.

11. Sukesh R. Bhaumik and H. M. Sonawat (1999). Kinetic mechanism of glucose dehydrogenase from Halobacterium salinarum. Indian Journal of Biochemistry and Biophysics 36: 143-149.

12. Sukesh R. Bhaumik and H. M. Sonawat (1999). Glucose Dehydrogenase from Halobacterium salinarum: Fluorescence Quenching and Binding to NADPH. Physiological Chemistry Physics & Medical NMR 31: 85-92.

13. Sukesh R. Bhaumik, Xiao-Yong Li, and Michael R. Green (2000). Distinct Classes of Yeast Promoters Revealed by Differential TAF Recruitment. Science 288: 1242-1244 (These authors contributed equally).

14. Sukesh R. Bhaumik and Michael R. Green (2001). SAGA is an essential in vivo target of the yeast acidic activator Gal4p. Genes and Development 15: 1935-1945.

15. Parvathy V. R., Sukesh R. Bhaumik, Kandala V.R. Chary, Girjesh Govil, Keliang Liu, Frank B. Howard and H. Todd Miles (2002). NMR structure of a parallel-stranded DNA duplex at atomic resolution. Nucleic Acids Research 30: 1500-1511.

16. Xiao-Yong Li, Sukesh R. Bhaumik, Xiaocun Zhu, Lei Li, Wu-Cheng Shen, Bharat L. Dixit and Michael R. Green (2002). Selective recruitment of TAFs by upstream activating sequences: Implications for eukaryotic promoter structure. Current Biology 12: 1240–1244.

17. Sukesh R. Bhaumik and Kandala V. R. Chary (2002). Molecular dynamics and mechanics calculations on a DNA duplex with A+-C, G-T and T-C mispairs. Journal of Biomolecular Structure and Dynamics 20: 199-206. 18. Sukesh R. Bhaumik and Michael R. Green (2002). Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo. Molecular and Cellular Biolog 22: 7365-7371.

19. Sukesh R. Bhaumik and Michael R. Green (2003). Interaction of Gal4p with components of the transcription machinery in vivo. Methods in Enzymology 370: 445- 454.

20. Sukesh R. Bhaumik, Wu-Cheng Shen, Helen C. Causton, Itamar Simon, Xiaochung Zhu, Ezra G. Jennings, Tzang-Shing Wang, Richard A. Young and Michael R. Green (2003). Comprehensive analysis of essential yeast TAFs in genome-wide transcription and pre-initiation complex assembly. EMBO Journal 22: 3395-3402. (These authors contributed equally).

21. Sukesh R. Bhaumik, Tamal Raha and Michael R. Green (2003). In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer. (manuscript under revision). (These authors contributed equally).