Additional File 1: Table S1: Ibis Microorganism Detection, Crswnp = Chronic Rhinosinusitis

Patient Disease Classification Ibis Bacterial Detection Genomes per Sample 1 CRSsNP Propionibacterium acnes 72 Moraxella catarrhalis 1255 Staphylococcus epidermidis 5 2 CRSwNP Staphylococcus aureus 372 Escherichia coli 24 Pseudomonas aeruginosa 24 Streptococcus agalactiae 1 3 CRSsNP Nocardia asteroides 30 4 CRSwNP Actinobacillus pleuropneumoniae 1709 Propionibacterium acnes 69 Anoxybacillus flavithermus 5 Staphylococcus epidermidis 10 Corynebacterium sp. 602 Lactobacillus acidophilus 13 5 CRSwNP Staphylococcus epidermidis 50 Propionibacterium granulosum 99 6 CRSwNP Staphylococcus aureus 1208 Haemophilus influenzae 104 Nocardia asteroides 37 Streptococcus agalactiae 5 Staphylococcus epidermidis 5 Streptococcus sanguinis 3 7 CRSwNP Staphylococcus aureus 746 Staphylococcus epidermidis 57 Haemophilus influenzae 4 8 CRSsNP Staphylococcus aureus 296 Nocardia asteroides 48 Corynebacterium pseudodiphtheriticum 658 Lactobacillus salivarius 108 9 CRSwNP Staphylococcus aureus 440 10 CRSwNP Staphylococcus epidermidis 56 Propionibacterium acnes 925 Moraxella catarrhalis 2537 Pediococcus pentosaceus 12 11 CRSsNP Prochlorococcus marinus 424 Propionibacterium acnes 62 Staphylococcus epidermidis 50 Corynebacterium pseudodiphtheriticum 327 Nocardia asteroides 133 Streptococcus agalactiae 50 12 CRSsNP Staphylococcus aureus 185 Propionibacterium acnes 232 Staphylococcus epidermidis 3 13 CRSwNP Staphylococcus aureus 1122 14 CRSsNP Staphylococcus aureus 231 Fusobacterium necrophorum 199 Enterococcus faecium 10 15 CRSsNP Staphylococcus aureus 511 Haemophilus sp. 280 16 CRSsNP Staphylococcus aureus 230 Haemophilus influenzae 24 Streptococcus gordonii 6 17 CRSsNP Staphylococcus epidermidis 30 Staphylococcus lugdunensis 1 18 CRSwNP Staphylococcus aureus 647 Propionibacterium acnes 61 19 CRSwNP Staphylococcus aureus 415 Streptococcus pyogenes 353 Francisella tularensis 1912 Nocardia asteroids 292 20 CRSwNP Staphylococcus aureus 157 Propionibacterium acnes 98 Staphylococcus epidermidis 13 Nocardia asteroides 445 Staphylococcus lugdunensis 8 21 CRSwNP Staphylococcus epidermidis 50 Staphylocccus aureus 320 Escherichia coli 1161 Citrobacter koseri 65 22 CRSwNP Staphylococcus aureus 1169 Propionibacterium acnes 276 Streptococcus pneumoniae 20 Staphylococcus epidermidis 8 23 CRSwNP Propionibacterium acnes 119 Staphylococcus epidermidis 1 Moraxella catarrhalis 269 Corynebacterium pseudodiphtheriticum 275 24 CRSsNP Propionibacterium acnes 9 25 CRSwNP Staphylococcus aureus 353 Staphylococcus epidermidis 6 Nocardia asteroides 123 26 CRSwNP Propionibacterium acnes 49 Staphylococcus epidermidis 20 Corynebacterium pseudodiphtheriticum 259 27 CRSsNP Staphylococcus aureus 836 28 CRSwNP Staphylococcus epidermidis 109 Propionibacterium acnes 50 Slackia exigua 493 29 CRSsNP Staphylococcus aureus 422 30 CRSwNP Staphylococcus aureus 147 Haemophilus influenzae 16 Nocardia asteroides 19 31 CRSwNP Streptococcus pneumoniae 1826 Staphylococcus aureus 185 Staphylococcus epidermidis 2 32 CRSwNP Haemophilus influenzae 256 Staphylococcus epidermidis 16 Streptococcus pneumoniae 62 Nocardia asteroids 466 Actinobacillus pleuropneumoniae 3 33 CRSwNP Pseudomonas aeruginosa 1729 Staphylococcus epidermidis 15 34 CRSwNP Pseudomonas aeruginosa 99 35 CRSsNP Propionibacterium acnes 312 Staphylococcus aureus 14 Staphylococcus epidermidis 1 36 CRSwNP Staphylococcus aureus 353 Staphylococcus epidermidis 1 Streptococcus agalactiae 1 37 CRSwNP Lactobacillus sp. 806 38 CRSwNP Staphylococcus aureus 190 39 Control Propionibacterium acnes 445 Staphylococcus epidermidis 6 Streptococcus agalactiae 3 40 Control Nocardia asteroides 72 Propionibacterium acnes 11 Staphylococcus epidermidis 5 41 Control Propionibacterium acnes 40 42 Control Staphylococcus epidermidis 5 Propionibacterium acnes 101 Staphylococcus aureus 10 43 Control Propionibacterium acnes 24 44 Control Staphylococcus aureus 91

Additional file 1: Table S1: Ibis Microorganism detection, CRSwNP = Chronic rhinosinusitis with nasal polyps, CRSsNP = Chronic rhinosinusitis without nasal polyps,