JCVI/JHU Cancer Sequencing Demonstration Project

Gene List Gene Name Gene Symbol RefSeq Type 1 TP53 Cellular tumor antigen p53 NM_000546 Control 2 PTEN Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase NM_000314 Control 3 EGFR Epidermal growth factor receptor NM_005228 Control Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic 4 PIK3CA subunit, α isoform NM_006218 Control 5 FGFR1 Fibroblast growth factor receptor 1 isoform 1 precursor NM_000604.2 Control 6 ROS1 Proto-oncogene tyrosine-protein kinase ROS precursor NM_002944 Control 7 PDGFRA Alpha platelet-derived growth factor receptor precursor NM_006206 Control 8 NOTCH1 Notch homolog 1, translocation-associated NM_017617 Control 9 ALK ALK tyrosine kinase receptor precursor NM_004304 RTK 1 0 INSR Insulin receptor NM_000208 RTK 1 1 INSRR Insulin receptor-related receptor NM_014215 RTK 1 2 TGFBR1 Transforming growth factor, beta receptor II (70/80kDa) NM_004612 RTK 1 V-erb-a erythroblastic leukemia viral oncogene homolog 4 3 ERBB4 (avian) NM_005235 RTK 1 4 EPHB1 EPH receptor B1 NM_004441 RTK 1 5 EPHA5 EPH receptor A5 NM_004439 RTK 1 6 PTK7 PTK7 protein tyrosine kinase 7 NM_152883 RTK 1 7 HDAC1 Histone deacetylase 1 NM_004964 HDAC 1 8 HDAC2 Histone deacetylase 2 NM_016621 HDAC 1 9 HDAC3 Histone deacetylase 3 NM_003883 HDAC 2 0 HDAC4 Histone deacetylase 4 NM_006037 HDAC 2 NM_00101505 1 HDAC5 Histone deacetylase 5 3 HDAC 2 2 HDAC6 Histone deacetylase 6 NM_006044 HDAC 2 3 HDAC7A Histone deacetylase 7a NM_016596 HDAC 2 4 HDAC8 Histone deacetylase 8 NM_018486 HDAC 2 5 HDAC9 Histone deacetylase 9 NM_058176 HDAC 2 6 HDAC10 Histone deacetylase 10 NM_032019 HDAC 2 7 HDAC11 Histone deacetylase 11 NM_024827 HDAC 2 8 SCN10A Sodium channel protein type X alpha subunit NM_006514 HDAC 2 9 SC11A Sodium channel protein type XI alpha subunit NM_014139 SCP 3 0 SCN1A Sodium channel protein type I alpha subunit N/A SCP 3 1 SCN2A2 Sodium channel protein type II alpha subunit NM_021007 SCP 3 2 SCN3A Sodium channel protein type III alpha subunit NM_006922 SCP 3 3 SCN4A Sodium channel protein type IV alpha subunit NM_000334 SCP 3 4 SCN5A Sodium channel protein type V alpha subunit NM_000335 SCP 3 5 SCN7A Sodium channel protein type VII alpha subunit NM_002976 SCP 3 6 SCN8A Sodium channel protein type VIII alpha subunit NM_014191 SCP 3