The UNIX Shells MOTIVATION
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Unix Introduction
Unix introduction Mikhail Dozmorov Summer 2018 Mikhail Dozmorov Unix introduction Summer 2018 1 / 37 What is Unix Unix is a family of operating systems and environments that exploits the power of linguistic abstractions to perform tasks Unix is not an acronym; it is a pun on “Multics”. Multics was a large multi-user operating system that was being developed at Bell Labs shortly before Unix was created in the early ’70s. Brian Kernighan is credited with the name. All computational genomics is done in Unix http://www.read.seas.harvard.edu/~kohler/class/aosref/ritchie84evolution.pdfMikhail Dozmorov Unix introduction Summer 2018 2 / 37 History of Unix Initial file system, command interpreter (shell), and process management started by Ken Thompson File system and further development from Dennis Ritchie, as well as Doug McIlroy and Joe Ossanna Vast array of simple, dependable tools that each do one simple task Ken Thompson (sitting) and Dennis Ritchie working together at a PDP-11 Mikhail Dozmorov Unix introduction Summer 2018 3 / 37 Philosophy of Unix Vast array of simple, dependable tools Each do one simple task, and do it really well By combining these tools, one can conduct rather sophisticated analyses The Linux help philosophy: “RTFM” (Read the Fine Manual) Mikhail Dozmorov Unix introduction Summer 2018 4 / 37 Know your Unix Unix users spend a lot of time at the command line In Unix, a word is worth a thousand mouse clicks Mikhail Dozmorov Unix introduction Summer 2018 5 / 37 Unix systems Three common types of laptop/desktop operating systems: Windows, Mac, Linux. Mac and Linux are both Unix-like! What that means for us: Unix-like operating systems are equipped with “shells”" that provide a command line user interface. -
Introduction to Unix
Introduction to Unix Rob Funk <[email protected]> University Technology Services Workstation Support http://wks.uts.ohio-state.edu/ University Technology Services Course Objectives • basic background in Unix structure • knowledge of getting started • directory navigation and control • file maintenance and display commands • shells • Unix features • text processing University Technology Services Course Objectives Useful commands • working with files • system resources • printing • vi editor University Technology Services In the Introduction to UNIX document 3 • shell programming • Unix command summary tables • short Unix bibliography (also see web site) We will not, however, be covering these topics in the lecture. Numbers on slides indicate page number in book. University Technology Services History of Unix 7–8 1960s multics project (MIT, GE, AT&T) 1970s AT&T Bell Labs 1970s/80s UC Berkeley 1980s DOS imitated many Unix ideas Commercial Unix fragmentation GNU Project 1990s Linux now Unix is widespread and available from many sources, both free and commercial University Technology Services Unix Systems 7–8 SunOS/Solaris Sun Microsystems Digital Unix (Tru64) Digital/Compaq HP-UX Hewlett Packard Irix SGI UNICOS Cray NetBSD, FreeBSD UC Berkeley / the Net Linux Linus Torvalds / the Net University Technology Services Unix Philosophy • Multiuser / Multitasking • Toolbox approach • Flexibility / Freedom • Conciseness • Everything is a file • File system has places, processes have life • Designed by programmers for programmers University Technology Services -
Shell Script & Advance Features of Shell Programming
Kirti Kaushik et al, International Journal of Computer Science and Mobile Computing, Vol.4 Issue.4, April- 2015, pg. 458-462 Available Online at www.ijcsmc.com International Journal of Computer Science and Mobile Computing A Monthly Journal of Computer Science and Information Technology ISSN 2320–088X IJCSMC, Vol. 4, Issue. 4, April 2015, pg.458 – 462 RESEARCH ARTICLE Shell Script & Advance Features of Shell Programming Kirti Kaushik* Roll No.15903, CS, Department of Computer science, Dronacharya College of Engineering, Gurgaon-123506, India Email: [email protected] Jyoti Yadav Roll No. 15040, CS, Department of Applied Computer science, Dronacharya College of Engineering, Gurgaon-123506, India Email: [email protected] Kriti Bhatia Roll No. 15048, CS, Department of Applied Computer science, Dronacharya College of Engineering, Gurgaon-123506, India Email: [email protected] Abstract-- In this research paper, the idea of shell scripting and writing computer programs is examined and different parts of shell programming are likewise contemplated. A shell script is a PC system intended to be controlled by the UNIX shell which is a charge line translator. The different tongues of shell scripts are thought to be scripting dialects. Regular operations performed by shell scripts incorporate document control, program execution, and printing content. A shell script can give an advantageous variety ofa framework order where unique environment settings, charge alternatives, or post-transforming apply naturally, yet in a manner that permits the new script to still go about as a completely typical UNIX summon. The real ideas like Programming in the Borne and C-shell, in which it would be clarified that how shell programming could be possible in Borne and C-shell. -
Use Perl Regular Expressions in SAS® Shuguang Zhang, WRDS, Philadelphia, PA
NESUG 2007 Programming Beyond the Basics Use Perl Regular Expressions in SAS® Shuguang Zhang, WRDS, Philadelphia, PA ABSTRACT Regular Expression (Regexp) enhance search and replace operations on text. In SAS®, the INDEX, SCAN and SUBSTR functions along with concatenation (||) can be used for simple search and replace operations on static text. These functions lack flexibility and make searching dynamic text difficult, and involve more function calls. Regexp combines most, if not all, of these steps into one expression. This makes code less error prone, easier to maintain, clearer, and can improve performance. This paper will discuss three ways to use Perl Regular Expression in SAS: 1. Use SAS PRX functions; 2. Use Perl Regular Expression with filename statement through a PIPE such as ‘Filename fileref PIPE 'Perl programm'; 3. Use an X command such as ‘X Perl_program’; Three typical uses of regular expressions will also be discussed and example(s) will be presented for each: 1. Test for a pattern of characters within a string; 2. Replace text; 3. Extract a substring. INTRODUCTION Perl is short for “Practical Extraction and Report Language". Larry Wall Created Perl in mid-1980s when he was trying to produce some reports from a Usenet-Nes-like hierarchy of files. Perl tries to fill the gap between low-level programming and high-level programming and it is easy, nearly unlimited, and fast. A regular expression, often called a pattern in Perl, is a template that either matches or does not match a given string. That is, there are an infinite number of possible text strings. -
A First Course to Openfoam
Basic Shell Scripting Slides from Wei Feinstein HPC User Services LSU HPC & LON [email protected] September 2018 Outline • Introduction to Linux Shell • Shell Scripting Basics • Variables/Special Characters • Arithmetic Operations • Arrays • Beyond Basic Shell Scripting – Flow Control – Functions • Advanced Text Processing Commands (grep, sed, awk) Basic Shell Scripting 2 Linux System Architecture Basic Shell Scripting 3 Linux Shell What is a Shell ▪ An application running on top of the kernel and provides a command line interface to the system ▪ Process user’s commands, gather input from user and execute programs ▪ Types of shell with varied features o sh o csh o ksh o bash o tcsh Basic Shell Scripting 4 Shell Comparison Software sh csh ksh bash tcsh Programming language y y y y y Shell variables y y y y y Command alias n y y y y Command history n y y y y Filename autocompletion n y* y* y y Command line editing n n y* y y Job control n y y y y *: not by default http://www.cis.rit.edu/class/simg211/unixintro/Shell.html Basic Shell Scripting 5 What can you do with a shell? ▪ Check the current shell ▪ echo $SHELL ▪ List available shells on the system ▪ cat /etc/shells ▪ Change to another shell ▪ csh ▪ Date ▪ date ▪ wget: get online files ▪ wget https://ftp.gnu.org/gnu/gcc/gcc-7.1.0/gcc-7.1.0.tar.gz ▪ Compile and run applications ▪ gcc hello.c –o hello ▪ ./hello ▪ What we need to learn today? o Automation of an entire script of commands! o Use the shell script to run jobs – Write job scripts Basic Shell Scripting 6 Shell Scripting ▪ Script: a program written for a software environment to automate execution of tasks ▪ A series of shell commands put together in a file ▪ When the script is executed, those commands will be executed one line at a time automatically ▪ Shell script is interpreted, not compiled. -
“Linux at the Command Line” Don Johnson of BU IS&T We’Ll Start with a Sign in Sheet
“Linux at the Command Line” Don Johnson of BU IS&T We’ll start with a sign in sheet. We’ll end with a class evaluation. We’ll cover as much as we can in the time allowed; if we don’t cover everything, you’ll pick it up as you continue working with Linux. This is a hands-on, lab class; ask questions at any time. Commands for you to type are in BOLD The Most Common O/S Used By BU Researchers When Working on a Server or Computer Cluster Linux is a Unix clone begun in 1991 and written from scratch by Linus Torvalds with assistance from a loosely-knit team of hackers across the Net. 64% of the world’s servers run some variant of Unix or Linux. The Android phone and the Kindle run Linux. a set of small Linux is an O/S core programs written by written by Linus Richard Stallman and Torvalds and others others. They are the AND GNU utilities. http://www.gnu.org/ Network: ssh, scp Shells: BASH, TCSH, clear, history, chsh, echo, set, setenv, xargs System Information: w, whoami, man, info, which, free, echo, date, cal, df, free Command Information: man, info Symbols: |, >, >>, <, ;, ~, ., .. Filters: grep, egrep, more, less, head, tail Hotkeys: <ctrl><c>, <ctrl><d> File System: ls, mkdir, cd, pwd, mv, touch, file, find, diff, cmp, du, chmod, find File Editors: gedit, nedit You need a “xterm” emulation – software that emulates an “X” terminal and that connects using the “SSH” Secure Shell protocol. ◦ Windows Use StarNet “X-Win32:” http://www.bu.edu/tech/support/desktop/ distribution/xwindows/xwin32/ ◦ Mac OS X “Terminal” is already installed Why? Darwin, the system on which Apple's Mac OS X is built, is a derivative of 4.4BSD-Lite2 and FreeBSD. -
Shell Variables
Shell Using the command line Orna Agmon ladypine at vipe.technion.ac.il Haifux Shell – p. 1/55 TOC Various shells Customizing the shell getting help and information Combining simple and useful commands output redirection lists of commands job control environment variables Remote shell textual editors textual clients references Shell – p. 2/55 What is the shell? The shell is the wrapper around the system: a communication means between the user and the system The shell is the manner in which the user can interact with the system through the terminal. The shell is also a script interpreter. The simplest script is a bunch of shell commands. Shell scripts are used in order to boot the system. The user can also write and execute shell scripts. Shell – p. 3/55 Shell - which shell? There are several kinds of shells. For example, bash (Bourne Again Shell), csh, tcsh, zsh, ksh (Korn Shell). The most important shell is bash, since it is available on almost every free Unix system. The Linux system scripts use bash. The default shell for the user is set in the /etc/passwd file. Here is a line out of this file for example: dana:x:500:500:Dana,,,:/home/dana:/bin/bash This line means that user dana uses bash (located on the system at /bin/bash) as her default shell. Shell – p. 4/55 Starting to work in another shell If Dana wishes to temporarily use another shell, she can simply call this shell from the command line: [dana@granada ˜]$ bash dana@granada:˜$ #In bash now dana@granada:˜$ exit [dana@granada ˜]$ bash dana@granada:˜$ #In bash now, going to hit ctrl D dana@granada:˜$ exit [dana@granada ˜]$ #In original shell now Shell – p. -
LPI 101 – Work on the Command Line [5] (Linux Professional Institute Certification) A
– LPI 101 – Work on the Command Line [5] (Linux Professional Institute Certification) a .˜. /V\ by: geoffrey robertson // \\ [email protected] @._.@ $Id: gl1.103.1.slides.tex,v 1.3 2003/05/30 05:09:04 waratah Exp $ a c Copyright 2002 Geoffrey Robertson, Andrew Eager. Permission is granted to make and distribute verbatim copies or modified versions of this document provided that this copyright notice and this permission notice are preserved on all copies under the terms of the GNU General Public License as published by the Free Software Foundation—either version 2 of the License or (at your option) any later version. 1 Work on the command line [5] Objective Candidate should be able to interact with shells and commands using the command line. This includes typing valid commands and command sequences, defining, referencing and exporting environment variables, using command history and editing facilities, invoking commands in the path and outside the path, using command substitution, applying commands recursively through a directory tree and using man to find about commands. 2 Work on the command line [5] Key files, terms, and utilities ¡ . ¡ man ¡ bash ¡ pwd ¡ echo ¡ set ¡ env ¡ unset ¡ ¡ exec ˜/.bash history ¡ ¡ export ˜/.profile 3 Work on the command line [5] Resources of interest LPI Certification in a Nutshell pp15—19 LPIC 1 Cert. Bible Chapter 2 Linux Shells by Example by Ellie Quigley 4 Shells Command Line Interface ¡ A shell is the program that provides a Command Line Interface to the operating system. 5 Shells may be accessed in various ways: – Virtual Console – Terminal attached to a serial line – Remote access over tcp/ip with telnet, rsh or ssh – An X terminal run on an X session, either on the local console or remotely See /etc/inittab Shells Command Line Interface ¡ A shell is the program that provides a Command Line Interface to the operating system. -
Shells and Shell Scripting
Shells and Shell scripting What is a Shell? • A shell is a command line interpreter that is the interface between the user and the OS. • A “program launcher” of sorts. • The shell: o analyzes each command o determines what actions are to be performed o performs the actions • Example: wc –l file1 > file2 Which shell? • sh – Bourne shell o Most common, other shells are a superset o Good for programming • csh or tcsh – default for command line on CDF o C-like syntax o Best for interactive use. Not good for programming. • bash – default on Linux (Bourne again shell) o Based on sh, with some csh features. • korn – written by David Korn o Based on sh – Some claim best for programming. o Commercial product. Common shell facilities Shell startup When a shell is invoked, it does the following: 1. Read a special startup file (usually in home directory) 2. display prompt and wait for command 3. Ctrl-D on its own line terminates shell, otherwise, goto step 2. Shell startup files used to set shell options, set up environment variables, alias sh – executes .profile if it’s there. ksh – executes .profile if in interactive mode. Executes $ENV (usually $HOME/.kshrc) csh – executes .cshrc if it exists. If a login shell, executes .login bash – executes .bashrc, if a login shell, executes .bash_profile instead Executables vs. built-in commands Most commands you run are other compiled programs. Found in /bin Example: ls – shell locates ls binary in /bin directory and launches it Some are not compiled programs, but built into the shell: cd, echo Input-output redirection prog < infile > outfile ls > outfile 2>&1 # sh stdout and stderr Pipelining commands send the output from one command to the input of the next: ls -l | wc ps –aux | grep reid | sort Before a program is executed, the shell recognizes the special characters such as <, >, |, and rewires the standard input, output, or error file descriptors of the program about to be executed to point to the right files (or the standard input of another program). -
Shell Scripting, Scripting Examples
Last Time… on the website Lecture 6 Shell Scripting What is a shell? • The user interface to the operating system • Functionality: – Execute other programs – Manage files – Manage processes • Full programming language • A program like any other – This is why there are so many shells Shell History • There are many choices for shells • Shell features evolved as UNIX grew Most Commonly Used Shells – /bin/csh C shell – /bin/tcsh Enhanced C Shell – /bin/sh The Bourne Shell / POSIX shell – /bin/ksh Korn shell – /bin/bash Korn shell clone, from GNU Ways to use the shell • Interactively – When you log in, you interactively use the shell • Scripting – A set of shell commands that constitute an executable program Review: UNIX Programs • Means of input: – Program arguments [control information] – Environment variables [state information] – Standard input [data] • Means of output: – Return status code [control information] – Standard out [data] – Standard error [error messages] Shell Scripts • A shell script is a regular text file that contains shell or UNIX commands – Before running it, it must have execute permission: • chmod +x filename • A script can be invoked as: – ksh name [ arg … ] – ksh < name [ args … ] – name [ arg …] Shell Scripts • When a script is run, the kernel determines which shell it is written for by examining the first line of the script – If 1st line starts with #!pathname-of-shell, then it invokes pathname and sends the script as an argument to be interpreted – If #! is not specified, the current shell assumes it is a script in its own language • leads to problems Simple Example #!/bin/sh echo Hello World Scripting vs. -
Unix (And Linux)
AWK....................................................................................................................................4 BC .....................................................................................................................................11 CHGRP .............................................................................................................................16 CHMOD.............................................................................................................................19 CHOWN ............................................................................................................................26 CP .....................................................................................................................................29 CRON................................................................................................................................34 CSH...................................................................................................................................36 CUT...................................................................................................................................71 DATE ................................................................................................................................75 DF .....................................................................................................................................79 DIFF ..................................................................................................................................84 -
Chapter 10 SHELL Substitution and I/O Operations
Chapter 10 SHELL Substitution and I/O Operations 10.1 Command Substitution Command substitution is the mechanism by which the shell performs a given set of commands and then substitutes their output in the place of the commands. Syntax: The command substitution is performed when a command is given as: `command` When performing command substitution make sure that you are using the backquote, not the single quote character. Example: Command substitution is generally used to assign the output of a command to a variable. Each of the following examples demonstrate command substitution: #!/bin/bash DATE=`date` echo "Date is $DATE" USERS=`who | wc -l` echo "Logged in user are $USERS" UP=`date ; uptime` echo "Uptime is $UP" This will produce following result: Date is Thu Jul 2 03:59:57 MST 2009 Logged in user are 1 Uptime is Thu Jul 2 03:59:57 MST 2009 03:59:57 up 20 days, 14:03, 1 user, load avg: 0.13, 0.07, 0.15 10.2 Shell Input/Output Redirections Most Unix system commands take input from your terminal and send the resulting output back to your terminal. A command normally reads its input from a place called standard input, which happens to be your terminal by default. Similarly, a command normally writes its output to standard output, which is also your terminal by default. Output Redirection: The output from a command normally intended for standard output can be easily diverted to a file instead. This capability is known as output redirection: If the notation > file is appended to any command that normally writes its output to standard output, the output of that command will be written to file instead of your terminal: Check following who command which would redirect complete output of the command in users file.