Crocidura Flavescens – Greater Red Musk Shrew
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A Palaeoecological and Taphonomic Analysis of the Micromammals from a Marine Isotope Stage 5 Layer at Klasies River, Southern Cape, South Africa
A PALAEOECOLOGICAL AND TAPHONOMIC ANALYSIS OF THE MICROMAMMALS FROM A MARINE ISOTOPE STAGE 5 LAYER AT KLASIES RIVER, SOUTHERN CAPE, SOUTH AFRICA. By: Nompumelelo Maringa 717230 Supervisor: Prof Sarah Wurz Co-Supervisor: Dr Jerome Reynard A dissertation submitted to the Faculty of Science, University of the Witwatersrand, Johannesburg, 2020, in fulfilment of the requirements for the degree of Master of Science. DIVISION OF ARCHAEOLOGY SCHOOL OF GEOGRAPHY, ARCHAEOLOGY AND ENVIRONMENTAL STUDIES. Declaration I declare that this dissertation is my own, unaided work. It is being submitted for the Degree of Master of Science in the University of the Witwatersrand, Johannesburg. It has not been submitted before for any degree or examination at any other University. Name: Nompumelelo Maringa Student number: 717230 Date: 6 July 2020 Signature: i Abstract This research investigated the palaeoecology at Klasies River main site during Marine Isotope Stage 5d by analysing the micromammal remains excavated from the BOS Three layer in Cave 1 during the 2017 excavation season. During this time, Cave 1 was inhabited by anatomically modern humans with complex modern behaviour. The taphonomic analysis shows that light and moderate digestion on the cranials and post-cranials are common, with the majority of specimens displaying moderate breakage. These modifications are associated with Tyto alba (Barn owl) and Bubo africanus (Spotted eagle-owl) as the accumulators of the assemblage. Encrustation and soil staining are the most prevalent post-depositional modifications in both cranial and post-cranial assemblages. This relates to the presence of tufa, speleothem material and the presence of water. The taxonomic analysis on the cranial elements (mandibles, maxillae and teeth) identified the most prominent species as Otomys irroratus (Southern African vlei rat), Myosorex varius (Forest shrew) and Crocidura flavescens (Greater red musk shrew). -
Molecular Phylogeny of Mobatviruses (Hantaviridae) in Myanmar and Vietnam
viruses Article Molecular Phylogeny of Mobatviruses (Hantaviridae) in Myanmar and Vietnam Satoru Arai 1, Fuka Kikuchi 1,2, Saw Bawm 3 , Nguyễn Trường Sơn 4,5, Kyaw San Lin 6, Vương Tân Tú 4,5, Keita Aoki 1,7, Kimiyuki Tsuchiya 8, Keiko Tanaka-Taya 1, Shigeru Morikawa 9, Kazunori Oishi 1 and Richard Yanagihara 10,* 1 Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo 162-8640, Japan; [email protected] (S.A.); [email protected] (F.K.); [email protected] (K.A.); [email protected] (K.T.-T.); [email protected] (K.O.) 2 Department of Chemistry, Faculty of Science, Tokyo University of Science, Tokyo 162-8601, Japan 3 Department of Pharmacology and Parasitology, University of Veterinary Science, Yezin, Nay Pyi Taw 15013, Myanmar; [email protected] 4 Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Hanoi, Vietnam; [email protected] (N.T.S.); [email protected] (V.T.T.) 5 Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi, Vietnam 6 Department of Aquaculture and Aquatic Disease, University of Veterinary Science, Yezin, Nay Pyi Taw 15013, Myanmar; [email protected] 7 Department of Liberal Arts, Faculty of Science, Tokyo University of Science, Tokyo 162-8601, Japan 8 Laboratory of Bioresources, Applied Biology Co., Ltd., Tokyo 107-0062, Japan; [email protected] 9 Department of Veterinary Science, National Institute of Infectious Diseases, Tokyo 162-8640, Japan; [email protected] 10 Pacific Center for Emerging Infectious Diseases Research, John A. -
When Beremendiin Shrews Disappeared in East Asia, Or How We Can Estimate Fossil Redeposition
Historical Biology An International Journal of Paleobiology ISSN: (Print) (Online) Journal homepage: https://www.tandfonline.com/loi/ghbi20 When beremendiin shrews disappeared in East Asia, or how we can estimate fossil redeposition Leonid L. Voyta , Valeriya E. Omelko , Mikhail P. Tiunov & Maria A. Vinokurova To cite this article: Leonid L. Voyta , Valeriya E. Omelko , Mikhail P. Tiunov & Maria A. Vinokurova (2020): When beremendiin shrews disappeared in East Asia, or how we can estimate fossil redeposition, Historical Biology, DOI: 10.1080/08912963.2020.1822354 To link to this article: https://doi.org/10.1080/08912963.2020.1822354 Published online: 22 Sep 2020. Submit your article to this journal View related articles View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=ghbi20 HISTORICAL BIOLOGY https://doi.org/10.1080/08912963.2020.1822354 ARTICLE When beremendiin shrews disappeared in East Asia, or how we can estimate fossil redeposition Leonid L. Voyta a, Valeriya E. Omelko b, Mikhail P. Tiunovb and Maria A. Vinokurova b aLaboratory of Theriology, Zoological Institute, Russian Academy of Sciences, Saint Petersburg, Russia; bFederal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of Russian Academy of Sciences, Vladivostok, Russia ABSTRACT ARTICLE HISTORY The current paper first time describes a small Beremendia from the late Pleistocene deposits in the Received 24 July 2020 Koridornaya Cave locality (Russian Far East), which associated with the extinct Beremendia minor. The Accepted 8 September 2020 paper is the first attempt to use a comparative analytical method to evaluate a possible case of redeposition KEYWORDS of fossil remains of this shrew. -
Species List: Mammals
Appendix 10 - Species list: Mammals Mammal species recorded in the Garden Route National Park. Sources: Crawford (1981 & 1982); De Graaff (1974); Grindley (1985). Hanekom et al. (1987); Hanekom unpubl.; Hanekom & Bower (1992); Herzig-Straschil & Robison (1978); McIlleron (2002); Pretorius et al. (1980); Riley unpubl.; Robinson (1976); SANParks unpublished data; Von Breitenbach (1974); Whitfield et al. (1983); Species numbers follow Skinner & Chimimba (2005). * Alien species not indigenous to South Africa No. Scientific Name Common Name CHRYSOCHLORIDAE 9 Chlorotalpa duthieae Duthie’s golden mole 14 Amblysomus corriae (iris) Fynbos (Zulu) golden mole ORYCTEROPODIDAE 27 Orycterus afer Aardvark PROCARVIIDAE 28 Procavia capensis Rock hyrax ELEPHANTIDAE 31 Loxodonta africana African savannah elephant LEPORIDAE 34 Lepus saxatilis Scrub hare BATHYERGIDAE 40 Bathyergus suillus Cape dune molerat 42 Cryptomys hottentotus African molerat 45 Georychus capensis Cape molerat HYSTRICIDAE 46 Hystrix africaeaustralis Cape porcupine MYOXIDAE 57 Graphiurus ocularis Spectacled dormouse 59 Graphiurus murinus Woodland dormouse MURIDAE 62 Acomys subspinosus Cape spiny mouse 65 Rhabdomys pumilio Four-striped grass mouse 73 Grammomys dolichurus Woodland thicket rat 79 Mus minutoides Pygmy mouse 82 Mastomys natalensis Natal multimammate mouse 85 Myomyscus verreauxii Verreaux’s mouse Rattus rattus* Black rat Rattus norvegicus* Brown rat 98 Otomys irroratus Vlei rat 116 Dendromus mesomelas Brant's climbing mouse 117 Dendromus mystacalis Chestnut climbing mouse CERCOPITHECIDAE -
Solenodon Genome Reveals Convergent Evolution of Venom in Eulipotyphlan Mammals
Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals Nicholas R. Casewella,1, Daniel Petrasb,c, Daren C. Cardd,e,f, Vivek Suranseg, Alexis M. Mychajliwh,i,j, David Richardsk,l, Ivan Koludarovm, Laura-Oana Albulescua, Julien Slagboomn, Benjamin-Florian Hempelb, Neville M. Ngumk, Rosalind J. Kennerleyo, Jorge L. Broccap, Gareth Whiteleya, Robert A. Harrisona, Fiona M. S. Boltona, Jordan Debonoq, Freek J. Vonkr, Jessica Alföldis, Jeremy Johnsons, Elinor K. Karlssons,t, Kerstin Lindblad-Tohs,u, Ian R. Mellork, Roderich D. Süssmuthb, Bryan G. Fryq, Sanjaya Kuruppuv,w, Wayne C. Hodgsonv, Jeroen Kooln, Todd A. Castoed, Ian Barnesx, Kartik Sunagarg, Eivind A. B. Undheimy,z,aa, and Samuel T. Turveybb aCentre for Snakebite Research & Interventions, Liverpool School of Tropical Medicine, Pembroke Place, L3 5QA Liverpool, United Kingdom; bInstitut für Chemie, Technische Universität Berlin, 10623 Berlin, Germany; cCollaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, CA 92093; dDepartment of Biology, University of Texas at Arlington, Arlington, TX 76010; eDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; fMuseum of Comparative Zoology, Harvard University, Cambridge, MA 02138; gEvolutionary Venomics Lab, Centre for Ecological Sciences, Indian Institute of Science, 560012 Bangalore, India; hDepartment of Biology, Stanford University, Stanford, CA 94305; iDepartment of Rancho La Brea, Natural History Museum of Los Angeles County, Los Angeles, -
Northern Cape Provincial Gazette Vol 15 No
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IIJCSRP Journal Template
Egypt. J. Comp. Path &Clinic Path. Vol.27 No.1, 2014 ; 73- 87 ISSN 1110-7537 A retrospective analysis of mortalities in Greater Red Musk Shrews (Crocidura flavescens) Omar A.S. Tamam,* Mohamed Refai,** *Department of Natural Resources, Environmental Studies & Research Institute, University of Sadat City. **Department of Microbiology, Faculty of Veterinary Medicine, Cairo University. ABSTRACT— The Greater Red Musk Shrew (Crocidura flavescens) is found throughout Africa, but several species of insectivorous African shrew are in decline, mainly due to the adverse effects of human activities and pollution. There is a lack of literature on the etiology and pathology of mortalities occurring in shrews in general, and this species in particular. We therefore undertook a detailed and systematic histopathological, parasitological, and ultrastructural examination of thirty-five Greater Red Musk Shrews that had died mainly of natural causes in Egypt between March 2008 and April 2014. Parasitic enteritis caused by Hilmylepis spp. was observed most frequently (n = 20), followed by parasitic pneumonia (n = 5), gastric giardiasis (n = 5), intestinal coccidiosis (n = 4), testicular degeneration (n = 4), intestinal amebiasis (n = 3), mycotic pneumonia (n = 3), Streptococcus pneumonia (n = 3), and blood protozoal infection (n = 2). There was a causative agent in 20/32 (63%) cases and several etiological agents 12/32 (37%) cases. Although a number of helminthic and parasitic gastrointestinal infections and lung infections are described in shrews, this is the first description of parasitic pneumonia, mycotic pneumonia, and testicular degeneration and in shrews. Awareness of these diseases can help in the management of shrews in captivity and prevent their population decline in the wild. -
Molecular Phylogenetics of Shrews (Mammalia: Soricidae) Reveal Timing of Transcontinental Colonizations
Molecular Phylogenetics and Evolution 44 (2007) 126–137 www.elsevier.com/locate/ympev Molecular phylogenetics of shrews (Mammalia: Soricidae) reveal timing of transcontinental colonizations Sylvain Dubey a,*, Nicolas Salamin a, Satoshi D. Ohdachi b, Patrick Barrie`re c, Peter Vogel a a Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland b Institute of Low Temperature Science, Hokkaido University, Sapporo 060-0819, Japan c Laboratoire Ecobio UMR 6553, CNRS, Universite´ de Rennes 1, Station Biologique, F-35380, Paimpont, France Received 4 July 2006; revised 8 November 2006; accepted 7 December 2006 Available online 19 December 2006 Abstract We sequenced 2167 base pairs (bp) of mitochondrial DNA cytochrome b and 16S, and 1390 bp of nuclear genes BRCA1 and ApoB in shrews taxa (Eulipotyphla, family Soricidae). The aim was to study the relationships at higher taxonomic levels within this family, and in particular the position of difficult clades such as Anourosorex and Myosorex. The data confirmed two monophyletic subfamilies, Soric- inae and Crocidurinae. In the former, the tribes Anourosoricini, Blarinini, Nectogalini, Notiosoricini, and Soricini were supported. The latter was formed by the tribes Myosoricini and Crocidurini. The genus Suncus appeared to be paraphyletic and included Sylvisorex.We further suggest a biogeographical hypothesis, which shows that North America was colonized by three independent lineages of Soricinae during middle Miocene. Our hypothesis is congruent with the first fossil records for these taxa. Using molecular dating, the first exchang- es between Africa and Eurasia occurred during the middle Miocene. The last one took place in the Late Miocene, with the dispersion of the genus Crocidura through the old world. -
How Many Species of Mammals Are There?
Journal of Mammalogy, 99(1):1–14, 2018 DOI:10.1093/jmammal/gyx147 INVITED PAPER How many species of mammals are there? CONNOR J. BURGIN,1 JOCELYN P. COLELLA,1 PHILIP L. KAHN, AND NATHAN S. UPHAM* Department of Biological Sciences, Boise State University, 1910 University Drive, Boise, ID 83725, USA (CJB) Department of Biology and Museum of Southwestern Biology, University of New Mexico, MSC03-2020, Albuquerque, NM 87131, USA (JPC) Museum of Vertebrate Zoology, University of California, Berkeley, CA 94720, USA (PLK) Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06511, USA (NSU) Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605, USA (NSU) 1Co-first authors. * Correspondent: [email protected] Accurate taxonomy is central to the study of biological diversity, as it provides the needed evolutionary framework for taxon sampling and interpreting results. While the number of recognized species in the class Mammalia has increased through time, tabulation of those increases has relied on the sporadic release of revisionary compendia like the Mammal Species of the World (MSW) series. Here, we present the Mammal Diversity Database (MDD), a digital, publically accessible, and updateable list of all mammalian species, now available online: https://mammaldiversity.org. The MDD will continue to be updated as manuscripts describing new species and higher taxonomic changes are released. Starting from the baseline of the 3rd edition of MSW (MSW3), we performed a review of taxonomic changes published since 2004 and digitally linked species names to their original descriptions and subsequent revisionary articles in an interactive, hierarchical database. We found 6,495 species of currently recognized mammals (96 recently extinct, 6,399 extant), compared to 5,416 in MSW3 (75 extinct, 5,341 extant)—an increase of 1,079 species in about 13 years, including 11 species newly described as having gone extinct in the last 500 years. -
Alexis Museum Loan NM
STANFORD UNIVERSITY STANFORD, CALIFORNIA 94305-5020 DEPARTMENT OF BIOLOGY PH. 650.725.2655 371 Serrra Mall FAX 650.723.0589 http://www.stanford.edu/group/hadlylab/ [email protected] 4/26/13 Joseph A. Cook Division of Mammals The Museum of Southwestern Biology at the University of New Mexico Dear Joe: I am writing on behalf of my graduate student, Alexis Mychajliw and her collaborator, Nat Clarke, to request the sampling of museum specimens (tissue, skins, skeletons) for DNA extraction for use in our study on the evolution of venom genes within Eulipotyphlan mammals. Please find included in this request the catalogue numbers of the desired specimens, as well as a summary of the project in which they will be used. We have prioritized the use of frozen or ethanol preserved tissues to avoid the destruction of museum skins, and seek tissue samples from other museums if only skins are available for a species at MSB. The Hadly lab has extensive experience in the non-destructive sampling of specimens for genetic analyses. Thank you for your consideration and assistance with our research. Please contact Alexis ([email protected]) with any questions or concerns regarding our project or sampling protocols, or for any additional information necessary for your decision and the processing of this request. Alexis is a first-year student in my laboratory at Stanford and her project outline is attached. As we are located at Stanford University, we are unable to personally pick up loan materials from the MSB. We request that you ship materials to us in ethanol or buffer. -
Cryptic Diversity in Forest Shrews of the Genus Myosorex from Southern Africa, with the Description of a New Species and Comments on Myosorex Tenuis
bs_bs_banner Zoological Journal of the Linnean Society, 2013, 169, 881–902. With 7 figures Cryptic diversity in forest shrews of the genus Myosorex from southern Africa, with the description of a new species and comments on Myosorex tenuis PETER JOHN TAYLOR1,2*, TERESA CATHERINE KEARNEY3, JULIAN C. KERBIS PETERHANS4,5, RODERICK M. BAXTER6 and SANDI WILLOWS-MUNRO2 1SARChI Chair on Biodiversity Value & Change in the Vhembe Biosphere Reserve & Core Member of Centre for Invasion Biology, School of Mathematical & Natural Sciences, University of Venda, P. Bag X5050, Thohoyandou, 0950, South Africa 2School of Life Science, University of KwaZulu-Natal, Durban and Pietermaritzburg, South Africa 3Department of Vertebrates, Small Mammals Section, Ditsong National Museum of Natural History (formerly Transvaal Museum), P.O. Box 413, Pretoria, 0001 South Africa 4University College, Roosevelt University, 430 South Michigan Avenue, Chicago, IL 60605, USA 5Department of Zoology, Field Museum of Natural History, 1400 Lake Shore Drive, Chicago, IL 60605, USA 6Department of Ecology & Resource Management, School of Environmental Sciences, University of Venda, P. Bag X5050, Thohoyandou 0950, South Africa Received 31 March 2013; revised 19 August 2013; accepted for publication 19 August 2013 Forest or mouse shrews (Myosorex) represent a small but important radiation of African shrews generally adapted to montane and/or temperate conditions. The status of populations from Zimbabwe, Mozambique, and the north of South Africa has long been unclear because of the variability of traits that have traditionally been ‘diagnostic’ for the currently recognized South African taxa. We report molecular (mitochondrial DNA and nuclear DNA), craniometric, and morphological data from newly collected series of Myosorex from Zimbabwe (East Highlands), Mozambique (Mount Gorogonsa, Gorongosa National Park), and the Limpopo Province of South Africa (Soutpansberg Range) in the context of the available museum collections from southern and eastern Africa and published DNA sequences. -
List of 28 Orders, 129 Families, 598 Genera and 1121 Species in Mammal Images Library 31 December 2013
What the American Society of Mammalogists has in the images library LIST OF 28 ORDERS, 129 FAMILIES, 598 GENERA AND 1121 SPECIES IN MAMMAL IMAGES LIBRARY 31 DECEMBER 2013 AFROSORICIDA (5 genera, 5 species) – golden moles and tenrecs CHRYSOCHLORIDAE - golden moles Chrysospalax villosus - Rough-haired Golden Mole TENRECIDAE - tenrecs 1. Echinops telfairi - Lesser Hedgehog Tenrec 2. Hemicentetes semispinosus – Lowland Streaked Tenrec 3. Microgale dobsoni - Dobson’s Shrew Tenrec 4. Tenrec ecaudatus – Tailless Tenrec ARTIODACTYLA (83 genera, 142 species) – paraxonic (mostly even-toed) ungulates ANTILOCAPRIDAE - pronghorns Antilocapra americana - Pronghorn BOVIDAE (46 genera) - cattle, sheep, goats, and antelopes 1. Addax nasomaculatus - Addax 2. Aepyceros melampus - Impala 3. Alcelaphus buselaphus - Hartebeest 4. Alcelaphus caama – Red Hartebeest 5. Ammotragus lervia - Barbary Sheep 6. Antidorcas marsupialis - Springbok 7. Antilope cervicapra – Blackbuck 8. Beatragus hunter – Hunter’s Hartebeest 9. Bison bison - American Bison 10. Bison bonasus - European Bison 11. Bos frontalis - Gaur 12. Bos javanicus - Banteng 13. Bos taurus -Auroch 14. Boselaphus tragocamelus - Nilgai 15. Bubalus bubalis - Water Buffalo 16. Bubalus depressicornis - Anoa 17. Bubalus quarlesi - Mountain Anoa 18. Budorcas taxicolor - Takin 19. Capra caucasica - Tur 20. Capra falconeri - Markhor 21. Capra hircus - Goat 22. Capra nubiana – Nubian Ibex 23. Capra pyrenaica – Spanish Ibex 24. Capricornis crispus – Japanese Serow 25. Cephalophus jentinki - Jentink's Duiker 26. Cephalophus natalensis – Red Duiker 1 What the American Society of Mammalogists has in the images library 27. Cephalophus niger – Black Duiker 28. Cephalophus rufilatus – Red-flanked Duiker 29. Cephalophus silvicultor - Yellow-backed Duiker 30. Cephalophus zebra - Zebra Duiker 31. Connochaetes gnou - Black Wildebeest 32. Connochaetes taurinus - Blue Wildebeest 33. Damaliscus korrigum – Topi 34.