Surfacing Visualization Mirages
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Ways of Seeing Data: a Survey of Fields of Visualization
• Ways of seeing data: • A survey of fields of visualization • Gordon Kindlmann • [email protected] Part of the talk series “Show and Tell: Visualizing the Life of the Mind” • Nov 19, 2012 http://rcc.uchicago.edu/news/show_and_tell_abstracts.html 2012 Presidential Election REPUBLICAN DEMOCRAT http://www.npr.org/blogs/itsallpolitics/2012/11/01/163632378/a-campaign-map-morphed-by-money 2012 Presidential Election http://gizmodo.com/5960290/this-is-the-real-political-map-of-america-hint-we-are-not-that-divided 2012 Presidential Election http://www.npr.org/blogs/itsallpolitics/2012/11/01/163632378/a-campaign-map-morphed-by-money 2012 Presidential Election http://www.npr.org/blogs/itsallpolitics/2012/11/01/163632378/a-campaign-map-morphed-by-money 2012 Presidential Election http://www.npr.org/blogs/itsallpolitics/2012/11/01/163632378/a-campaign-map-morphed-by-money Clarifying distortions Tube map from 1908 http://www.20thcenturylondon.org.uk/beck-henry-harry http://briankerr.wordpress.com/2009/06/08/connections/ http://en.wikipedia.org/wiki/Harry_Beck Clarifying distortions http://www.20thcenturylondon.org.uk/beck-henry-harry Harry Beck 1933 http://briankerr.wordpress.com/2009/06/08/connections/ http://en.wikipedia.org/wiki/Harry_Beck Clarifying distortions Clarifying distortions Joachim Böttger, Ulrik Brandes, Oliver Deussen, Hendrik Ziezold, “Map Warping for the Annotation of Metro Maps” IEEE Computer Graphics and Applications, 28(5):56-65, 2008 Maps reflect conventions, choices, and priorities “A single map is but one of an indefinitely large -
Domain-Specific Programming Systems
Lecture 22: Domain-Specific Programming Systems Parallel Computer Architecture and Programming CMU 15-418/15-618, Spring 2020 Slide acknowledgments: Pat Hanrahan, Zach Devito (Stanford University) Jonathan Ragan-Kelley (MIT, Berkeley) Course themes: Designing computer systems that scale (running faster given more resources) Designing computer systems that are efficient (running faster under constraints on resources) Techniques discussed: Exploiting parallelism in applications Exploiting locality in applications Leveraging hardware specialization (earlier lecture) CMU 15-418/618, Spring 2020 Claim: most software uses modern hardware resources inefficiently ▪ Consider a piece of sequential C code - Call the performance of this code our “baseline performance” ▪ Well-written sequential C code: ~ 5-10x faster ▪ Assembly language program: maybe another small constant factor faster ▪ Java, Python, PHP, etc. ?? Credit: Pat Hanrahan CMU 15-418/618, Spring 2020 Code performance: relative to C (single core) GCC -O3 (no manual vector optimizations) 51 40/57/53 47 44/114x 40 = NBody 35 = Mandlebrot = Tree Alloc/Delloc 30 = Power method (compute eigenvalue) 25 20 15 10 5 Slowdown (Compared to C++) Slowdown (Compared no data no 0 data no Java Scala C# Haskell Go Javascript Lua PHP Python 3 Ruby (Mono) (V8) (JRuby) Data from: The Computer Language Benchmarks Game: CMU 15-418/618, http://shootout.alioth.debian.org Spring 2020 Even good C code is inefficient Recall Assignment 1’s Mandelbrot program Consider execution on a high-end laptop: quad-core, Intel Core i7, AVX instructions... Single core, with AVX vector instructions: 5.8x speedup over C implementation Multi-core + hyper-threading + AVX instructions: 21.7x speedup Conclusion: basic C implementation compiled with -O3 leaves a lot of performance on the table CMU 15-418/618, Spring 2020 Making efficient use of modern machines is challenging (proof by assignments 2, 3, and 4) In our assignments, you only programmed homogeneous parallel computers. -
Scientific Visualization
Report from Dagstuhl Seminar 11231 Scientific Visualization Edited by Min Chen1, Hans Hagen2, Charles D. Hansen3, and Arie Kaufman4 1 University of Oxford, GB, [email protected] 2 TU Kaiserslautern, DE, [email protected] 3 University of Utah, US, [email protected] 4 SUNY – Stony Brook, US, [email protected] Abstract This report documents the program and the outcomes of Dagstuhl Seminar 11231 “Scientific Visualization”. Seminar 05.–10. June, 2011 – www.dagstuhl.de/11231 1998 ACM Subject Classification I.3 Computer Graphics, I.4 Image Processing and Computer Vision, J.2 Physical Sciences and Engineering, J.3 Life and Medical Sciences Keywords and phrases Scientific Visualization, Biomedical Visualization, Integrated Multifield Visualization, Uncertainty Visualization, Scalable Visualization Digital Object Identifier 10.4230/DagRep.1.6.1 1 Executive Summary Min Chen Hans Hagen Charles D. Hansen Arie Kaufman License Creative Commons BY-NC-ND 3.0 Unported license © Min Chen, Hans Hagen, Charles D. Hansen, and Arie Kaufman Scientific Visualization (SV) is the transformation of abstract data, derived from observation or simulation, into readily comprehensible images, and has proven to play an indispensable part of the scientific discovery process in many fields of contemporary science. This seminar focused on the general field where applications influence basic research questions on one hand while basic research drives applications on the other. Reflecting the heterogeneous structure of Scientific Visualization and the currently unsolved problems in the field, this seminar dealt with key research problems and their solutions in the following subfields of scientific visualization: Biomedical Visualization: Biomedical visualization and imaging refers to the mechan- isms and techniques utilized to create and display images of the human body, organs or their components for clinical or research purposes. -
The Fourth Paradigm
ABOUT THE FOURTH PARADIGM This book presents the first broad look at the rapidly emerging field of data- THE FOUR intensive science, with the goal of influencing the worldwide scientific and com- puting research communities and inspiring the next generation of scientists. Increasingly, scientific breakthroughs will be powered by advanced computing capabilities that help researchers manipulate and explore massive datasets. The speed at which any given scientific discipline advances will depend on how well its researchers collaborate with one another, and with technologists, in areas of eScience such as databases, workflow management, visualization, and cloud- computing technologies. This collection of essays expands on the vision of pio- T neering computer scientist Jim Gray for a new, fourth paradigm of discovery based H PARADIGM on data-intensive science and offers insights into how it can be fully realized. “The impact of Jim Gray’s thinking is continuing to get people to think in a new way about how data and software are redefining what it means to do science.” —Bill GaTES “I often tell people working in eScience that they aren’t in this field because they are visionaries or super-intelligent—it’s because they care about science The and they are alive now. It is about technology changing the world, and science taking advantage of it, to do more and do better.” —RhyS FRANCIS, AUSTRALIAN eRESEARCH INFRASTRUCTURE COUNCIL F OURTH “One of the greatest challenges for 21st-century science is how we respond to this new era of data-intensive -
The Diversity of Data and Tasks in Event Analytics
The Diversity of Data and Tasks in Event Analytics Catherine Plaisant, Ben Shneiderman Abstract— The growing interest in event analytics has resulted in an array of tools and applications using visual analytics techniques. As we start to compare and contrast approaches, tools and applications it will be essential to develop a common language to describe the data characteristics and diverse tasks. We propose a characterisation of event data along 3 dimensions (temporal characteristics, attributes and scale) and propose 8 high-level user tasks. We look forward to refining the lists based on the feedback of workshop attendees. KEYWORDS having the same time stamp, medical data are often Temporal analysis, pattern analysis, task analysis, taxonomy, big recorded in batches after the fact. data, temporal visualization o The relevant time scale may vary (from milliseconds to years), and may be homogeneous or not. INTRODUCTION o Data may represent changes over time of a status The growing interest in event analytics (e.g. Aigner et al, 2011; indicator, e.g. changes of cancer stages, student status or Shneiderman and Plaisant, 2016) has resulted in an array of novel physical presence in various hospital services, or may tools and applications using visual analytics techniques. As represent a set of events or actions that are not exclusive researchers compare and contrast approaches it will be helpful to from one another, e.g. actions in a computer log or series develop a common language to describe the diverse tasks and data of symptoms and medical tests. characteristics analysts encounter. o Patterns may be very cyclical or not, and this may vary The methodology of design studies - which primarily focus on over time. -
The Mission of IUPUI Is to Provide for Its Constituents Excellence in Teaching and Learning; Research, Scholarship, and Creative Activity; and Civic Engagement
INFO H517 Visualization Design, Analysis, and Evaluation Department of Human-Centered Computing Indiana University School of Informatics and Computing, Indianapolis Fall 2016 Section No.: 35557 Credit Hours: 3 Time: Wednesdays 12:00 – 2:40 PM Location: IT 257, Informatics & Communications Technology Complex 535 West Michigan Street, Indianapolis, IN 46202 [map] First Class: August 24, 2016 Website: http://vis.ninja/teaching/h590/ Instructor: Khairi Reda, Ph.D. in Computer Science (University of Illinois, Chicago) Assistant Professor, Human–Centered Computing Office Hours: Mondays, 1:00-2:30PM, or by Appointment Office: IT 581, Informatics & Communications Technology Complex 535 West Michigan Street, Indianapolis, IN 46202 [map] Phone: (317) 274-5788 (Office) Email: [email protected] Website: http://vis.ninja/ Prerequisites: Prior programming experience in a high-level language (e.g., Java, JavaScript, Python, C/C++, C#). COURSE DESCRIPTION This is an introductory course in design and evaluation of interactive visualizations for data analysis. Topics include human visual perception, visualization design, interaction techniques, and evaluation methods. Students develop projects to create their own web- based visualizations and develop competence to undertake independent research in visualization and visual analytics. EXTENDED COURSE DESCRIPTION This course introduces students to interactive data visualization from a human-centered perspective. Students learn how to apply principles from perceptual psychology, cognitive science, and graphics design to create effective visualizations for a variety of data types and analytical tasks. Topics include fundamentals of human visual perception and cognition, 1 2 graphical data encoding, visual representations (including statistical plots, maps, graphs, small-multiples), task abstraction, interaction techniques, data analysis methods (e.g., clustering and dimensionality reduction), and evaluation methods. -
Computational Photography
Computational Photography George Legrady © 2020 Experimental Visualization Lab Media Arts & Technology University of California, Santa Barbara Definition of Computational Photography • An R & D development in the mid 2000s • Computational photography refers to digital image-capture cameras where computers are integrated into the image-capture process within the camera • Examples of computational photography results include in-camera computation of digital panoramas,[6] high-dynamic-range images, light- field cameras, and other unconventional optics • Correlating one’s image with others through the internet (Photosynth) • Sensing in other electromagnetic spectrum • 3 Leading labs: Marc Levoy, Stanford (LightField, FrankenCamera, etc.) Ramesh Raskar, Camera Culture, MIT Media Lab Shree Nayar, CV Lab, Columbia University https://en.wikipedia.org/wiki/Computational_photography Definition of Computational Photography Sensor System Opticcs Software Processing Image From Shree K. Nayar, Columbia University From Shree K. Nayar, Columbia University Shree K. Nayar, Director (lab description video) • Computer Vision Laboratory • Lab focuses on vision sensors; physics based models for vision; algorithms for scene interpretation • Digital imaging, machine vision, robotics, human- machine interfaces, computer graphics and displays [URL] From Shree K. Nayar, Columbia University • Refraction (lens / dioptrics) and reflection (mirror / catoptrics) are combined in an optical system, (Used in search lights, headlamps, optical telescopes, microscopes, and telephoto lenses.) • Catadioptric Camera for 360 degree Imaging • Reflector | Recorded Image | Unwrapped [dance video] • 360 degree cameras [Various projects] Marc Levoy, Computer Science Lab, Stanford George Legrady Director, Experimental Visualization Lab Media Arts & Technology University of California, Santa Barbara http://vislab.ucsb.edu http://georgelegrady.com Marc Levoy, Computer Science Lab, Stanford • Light fields were introduced into computer graphics in 1996 by Marc Levoy and Pat Hanrahan. -
Multi-Feature Based Transfer Function Design for 3D Medical Image Visualization
2010 3rd International Conference on Biomedical Engineering and Informatics (BMEI 2010) Multi-feature Based Transfer Function Design for 3D Medical Image Visualization Yi Peng, Li Chen Institute of CG & CAD School of Software, Tsinghua University Beijing, China Abstract—Visualization of three dimensional volumetric medical in multi-dimensional transfer function design. Each of them is data has been widely used. Even though, it still faces a lot of related to a particular local feature. Chen, et al. introduce a challenges, such as helping users find out structure of their volume illustration technique which is shape-aware, as it interest, illustrating features which are significant for diagnosis depends not only on the rendering styles, but also the shape of disease. In our paper, a multi-feature based transfer function styles [6]. Chen’s work improves the expressiveness of volume is provided to improve the quality of visualization. We compute a illustration by focusing more on shape, but it needs the help of multi-feature descriptor for both two-phase clustering and other given illustrations. transfer function design. Moreover, we test the transfer function on several medical datasets to show the efficiency and In addition, [7] presents two visualization techniques for practicability of our method. curve-centric volume reformation to create compelling comparative visualizations, and [8] introduces a texture-based Multi-feature, statistical analysis, pre-segmentation, transfer volume rendering approach which achieves the image quality function, volume rendering, visualization of the best post-shading approaches with far less slices. Their approaches use the latest techniques to accelerate volume I. INTRODUCTION rendering while keep using the general visualization methods. -
Quantitative Literacy to New Quantitative Literacies
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/319160466 Quantitative Literacy to New Quantitative Literacies Chapter · May 2017 CITATIONS READS 0 39 3 authors, including: Rohit Mehta James P. Howard California State University, Fresno Johns Hopkins University 32 PUBLICATIONS 42 CITATIONS 13 PUBLICATIONS 0 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: MSU-Wipro STEM & Leadership View project I Wonder: Research To Practice View project All content following this page was uploaded by Rohit Mehta on 18 October 2017. The user has requested enhancement of the downloaded file. 5 Quantitative Literacy to New Quantitative Literacies Jeffrey Craig, Rohit Mehta; James P. Howard II Michigan State University; University of Maryland University College 5.1 Introduction Steen and colleagues [42] made their Case for Quantitative Literacy based on the premise that the 21st-century, pri- marily due to technology changes, is a significantly more quantitative environment than any previous time in history. The design team who wrote the case made rhetorical observations about the increasing prevalence of numbers in society in the United States; phrases like [a] world awash in numbers [42] precede nearly every piece of literature regarding quantitative literacy (or numeracy). The authors used this rhetoric to position people relative to the demands of social systems in the world. Specifically, numeracy has emerged as a partner to literacy because the social world is being integrated with numbers due to recent technological advances. Steen argued that as the printing press gave the power of letters to the masses, so the computer gives the power of number to ordinary citizens [40, p. -
Ways of Visualizing Data on Curves
Edinburgh Research Explorer Ways of Visualizing Curves Citation for published version: Bach, B, Ren, Q, Perin, C & Dragicevic, P 2018, Ways of Visualizing Curves. in Proceedings of the 5th Biennial Transdisciplinary Imaging Conference 2018. Edinburgh, UK, The Latent Image, Edinburgh, United Kingdom, 18/04/18. https://doi.org/10.6084/m9.figshare.6104705 Digital Object Identifier (DOI): 10.6084/m9.figshare.6104705 Link: Link to publication record in Edinburgh Research Explorer Document Version: Peer reviewed version Published In: Proceedings of the 5th Biennial Transdisciplinary Imaging Conference 2018 General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 24. Sep. 2021 Transimage 2018 Proceedings of the 5th Biennial Transdisciplinary Imaging Conference 2018 Ways of Visualizing Data on Curves Benjamin Bach [email protected] Charles Perin [email protected] University of Edinburgh, Edinburgh, UK City University, London, UK Qiuyuan Ren [email protected] Pierre Dragicevic [email protected] University of Edinburgh, Edinburgh, UK Inria, Saclay, France Visual variables used to encode data on the curve in the enrichment stage. -
To Draw a Tree
To Draw a Tree Pat Hanrahan Computer Science Department Stanford University Motivation Hierarchies File systems and web sites Organization charts Categorical classifications Similiarity and clustering Branching processes Genealogy and lineages Phylogenetic trees Decision processes Indices or search trees Decision trees Tournaments Page 1 Tree Drawing Simple Tree Drawing Preorder or inorder traversal Page 2 Rheingold-Tilford Algorithm Information Visualization Page 3 Tree Representations Most Common … Page 4 Tournaments! Page 5 Second Most Common … Lineages Page 6 http://www.royal.gov.uk/history/trees.htm Page 7 Demonstration Saito-Sederberg Genealogy Viewer C. Elegans Cell Lineage [Sulston] Page 8 Page 9 Page 10 Page 11 Evolutionary Trees [Haeckel] Page 12 Page 13 [Agassiz, 1883] 1989 Page 14 Chapple and Garofolo, In Tufte [Furbringer] Page 15 [Simpson]] [Gould] Page 16 Tree of Life [Haeckel] [Tufte] Page 17 Janvier, 1812 “Graphical Excellence is nearly always multivariate” Edward Tufte Page 18 Phenograms to Cladograms GeneBase Page 19 http://www.gwu.edu/~clade/spiders/peet.htm Page 20 Page 21 The Shape of Trees Page 22 Patterns of Evolution Page 23 Hierachical Databases Stolte and Hanrahan, Polaris, InfoVis 2000 Page 24 Generalization • Aggregation • Simplification • Filtering Abstraction Hierarchies Datacubes Star and Snowflake Schemes Page 25 Memory & Code Cache misses for a procedure for 10 million cycles White = not run Grey = no misses Red = # misses y-dimension is source code x-dimension is cycles (time) Memory & Code zooming on y zooms from fileprocedurelineassembly code zooming on x increases time resolution down to one cycle per bar Page 26 Themes Cognitive Principles for Design Congruence Principle: The structure and content of the external representation should correspond to the desired structure and content of the internal representation. -
Using Visualization to Understand the Behavior of Computer Systems
USING VISUALIZATION TO UNDERSTAND THE BEHAVIOR OF COMPUTER SYSTEMS A DISSERTATION SUBMITTED TO THE DEPARTMENT OF COMPUTER SCIENCE AND THE COMMITTEE ON GRADUATE STUDIES OF STANFORD UNIVERSITY IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY Robert P. Bosch Jr. August 2001 c Copyright by Robert P. Bosch Jr. 2001 All Rights Reserved ii I certify that I have read this dissertation and that in my opinion it is fully adequate, in scope and quality, as a dissertation for the degree of Doctor of Philosophy. Dr. Mendel Rosenblum (Principal Advisor) I certify that I have read this dissertation and that in my opinion it is fully adequate, in scope and quality, as a dissertation for the degree of Doctor of Philosophy. Dr. Pat Hanrahan I certify that I have read this dissertation and that in my opinion it is fully adequate, in scope and quality, as a dissertation for the degree of Doctor of Philosophy. Dr. Mark Horowitz Approved for the University Committee on Graduate Studies: iii Abstract As computer systems continue to grow rapidly in both complexity and scale, developers need tools to help them understand the behavior and performance of these systems. While information visu- alization is a promising technique, most existing computer systems visualizations have focused on very specific problems and data sources, limiting their applicability. This dissertation introduces Rivet, a general-purpose environment for the development of com- puter systems visualizations. Rivet can be used for both real-time and post-mortem analyses of data from a wide variety of sources. The modular architecture of Rivet enables sophisticated visualiza- tions to be assembled using simple building blocks representing the data, the visual representations, and the mappings between them.