Regional Genetics Resource Directory
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AMP Molecular Genetic Pathology Recommended Review Books
ASSOCIATION FOR MOLECULAR PATHOLOGY Education. Innovation & Improved Patient Care. Advocacy. 6120 Executive Blvd. Suite 700, Rockville, MD 20852 Tel: 301-634-7939 | Fax: 301-634-7995 | [email protected] | www.amp.org AMP Molecular Genetic Pathology : RECOMMENDED REVIEW BOOKS Updated: March, 2021 The following books are suggested for those preparing for the Molecular Genetic Pathology board exam administered by the American Board of Medical Genetics and the American Board of Pathology. This list represents the recommendations of the MGP Review Course faculty and the AMP Training and Education Committee; endorsement by the ABMG or the ABP is not implied. GENERAL MOLECULAR PATHOLOGY Thompson & Thompson Genetics in Medicine, 8th edition Nussbaum RL et al., eds. Elsevier, 2015 Molecular Pathology: The Molecular Basis of Human Diseases 2nd edition Coleman WB and Tsongalis GJ, eds. Elsevier, 2018 Diagnostic Molecular Pathology: A Guide to Applied Molecular Testing Coleman WB and Tsongalis GJ, eds. Elsevier, 2016 Molecular Basis of Human Cancer, 2nd edition Coleman WB and Tsongalis GJ, eds. Elsevier, 2017 Molecular Diagnostics: Fundamentals, Methods, and Clinical Applications 3rd edition Buckingham L. ASCP, 2021 Genomic Medicine: A Practical Guide Tafe LJ and Arcila ME, eds. Springer, 2020 CYTOGENETICS Gardner and Sutherland’s Chromosome Abnormalities and Genetic Counseling, 5th edition McKinlay Gardner RJ, Amor DJ. Oxford University Press, 2018 The Principles of Clinical Cytogenetics, 3rd edition Gersen SL and Keagle MB, eds. Human Press, 2013 Human Chromosomes, 4th edition Miller OJ and Therman E, eds. Springer Press, 2000 Vance GH, Khan WA. Utility of Fluorescence In Situ Hybridization in Clinical and Research Applications. Advances in Molecular Pathology 2020; 3:65-75. -
Leave Policy for Residents and Fellows.Pdf
Leave Policy for Residents and Fellows The following policy outlines indications and training modifications to accommodate leave during accredited training for certification in all of the ABMGG specialties. Candidates for certification are required to successfully complete training in one of the following programs: ACGME-accredited Programs: 24 months (2 years) • Medical Genetics and Genomics Residency • Clinical Biochemical Genetics Postdoctoral Fellowship • Laboratory Genetics and Genomics Postdoctoral Fellowship Approved Combined Residency Programs: 48 months (4 years) • Medical Genetics and Genomics/Internal Medicine • Medical Genetics and Genomics/Pediatrics • Medical Genetics and Genomics/Maternal Fetal Medicine • Medical Genetics and Genomics/Reproductive Endocrinology and Infertility Subspecialty Fellowship Programs: 12 months (1 year) • Medical Biochemical Genetics • Molecular Genetic Pathology (cosponsored with American Board of Pathology) General Leave Policy: All candidates are allotted 4 weeks leave per year, which may be accrued or averaged through the duration of training for any indication. All candidates must take at least one week off per year as designated vacation time. Leave time cannot be forfeited to shorten training duration. Parental, Caregiver, and Medical Leave Policy: This policy refers to leave for the following indications: parental leave (the birth and care of a newborn including adopted and foster children for either partner), caregiver leave (care for an immediate (first degree) family member or partner with a serious health condition), or medical leave for significant personal medical needs. For Parental, Caregiver, and Medical leave, the ABMGG will allow up to 6 weeks leave during an academic year to occur once during the training program. For trainees who take indicated leave, they must still take at least one additional week for vacation during the same training year. -
Department of Molecular Biology and Immunology
Genetics Student Handbook 2020-2021 The information provided in this document serves to supplement the requirements of the Graduate School of Biomedical Sciences detailed in the UNTHSC Catalog with requirements specific to the Genetics discipline. Genetics Discipline (8/6/20) 1 Table of Contents Page Description of the Genetics Discipline ............................................ 3 Graduate Faculty and Their Research ............................................. 5 Requirements ................................................................................... 9 Required Courses ....................................................................... 9 Journal Club and Seminar Courses ............................................ 9 Elective Courses ......................................................................... 9 Sample Degree Plans ..................................................................... 11 Advancement to Candidacy ........................................................... 14 Genetics Discipline (8/6/20) 2 1. Description of the Genetics Discipline John V. Planz, Ph.D., Graduate Advisor Center for BioHealth, Rm 360 Phone: 817-735-2397 E-mail: [email protected] Program website: www.unthsc.edu/graduate-school-of-biomedical-sciences/genetics/ Graduate Faculty: Allen; Barber; Budowle; Cihlar; Coble; Ge; Phillips; Planz; Woerner Genetics is a broad interdisciplinary field that unites biochemistry, microbial and cellular biology, molecular processes, biotechnology, computational biology, biogeography and human disease -
Heredity in Sarcoidosis: a Registry-Based Twin Study Thorax: First Published As 10.1136/Thx.2007.094060 on 5 June 2008
Sarcoidosis Heredity in sarcoidosis: a registry-based twin study Thorax: first published as 10.1136/thx.2007.094060 on 5 June 2008. Downloaded from A Sverrild,1 V Backer,1 K O Kyvik,2 J Kaprio,3 N Milman,4 C B Svendsen,5 S F Thomsen1 1 Department of Respiratory ABSTRACT Prevalence and incidence are dependent on age, sex Medicine, Bispebjerg University Background: Sarcoidosis is a multiorgan granulomatous and ethnicity.1 2 8–10 Hospital, Copenhagen, Denmark; The present understanding of the pathogenesis 2 Institute of Regional Health inflammatory disease of unknown aetiology. Familial Research Services and The clustering of cases and ethnic variation in the epidemiol- of the disease is that sarcoidosis is triggered by an Danish Twin Registry, University ogy suggests a genetic influence on susceptibility to the abnormal immune response to an environmental of Southern Denmark, Odense, agent in a genetically predisposed individual.1 3 disease. This paper reports twin concordance and Denmark; The Finnish Twin heritability estimates of sarcoidosis in order to assess the Genetic factors are considered to contribute to Cohort Study, Department of Public Health, University of overall contribution of genetic factors to the disease the development of sarcoidosis for two main 12610 Helsinki, Helsinki, Finland and susceptibility. reasons ; (1) epidemiological studies have Department of Mental Health Methods: Monozygotic and dizygotic twins enrolled in identified ethnicity as an important risk factor; and Alcohol Research, National the Danish and the Finnish population-based national twin and (2) familial clustering of cases has been Public Health Institute, Helsinki, 4 observed frequently over the last decades. -
Importance of Medical Genetics Research in Medicine
cs an eti d D n N e A G f R Journal of Genetics and DNA o e l s a e a n Sboui S, Tabbabi A, J Genet DNA Res 2018, 2:1 r r c u h o J Research Short Communication Open Access Importance of Medical Genetics Research in Medicine Sajida Sboui1 and Ahmed Tabbabi2* 1Faculty of Medicine of Monastir, Monastir University, Monastir, Tunisia 2Department of Hygiene and Environmental Protection, Ministry of Public Health, Tunis, Tunisia *Corresponding author: Ahmed Tabbabi, Department of Hygiene and Environmental Protection, Ministry of Public Health, Tunis, Tunisia, Tel: +216 71 577 115; +216 71 577 302; E-mail: [email protected] Received date: February 09, 2018, Accepted date: February 20, 2018, Published date: February 27, 2018 Copyright: © 2018 Sboui S, et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Keywords: Chromosome; Genes; Cleft lip; Transforming growth In medical genetics, the work diagnosis includes molecular analyzes factors (DNA, proteins and chromosomes) and clinical manisfestations of conditions, including malformations birth. If monogenic diseases are Short Communication rare, those caused by the gene/environment interaction are common and include many diseases. Prevention in medical genetics involves for About millions of families are affected by hereditary diseases around common pathologies the identification of subjects with high risk, with the world. Statistics analysis showed that about 5% of all pregnancies the intention of preventing the disease (e.g. -
National Longitudinal Study of Adolescent to Adult Health
Social, Behavioral, and Biological Linkages Across the Life Course Social, Behavioral, and Biological Linkages Across the Life Course School Sampling Frame = QED National Longitudinal Study of HS Adolescent to Adult Health HS HS HHS HS Feeder Feeder Feeder Feeder Feeder Sampling Frame of Adolescents and Parents N = 100,000+ (100 to 4,000 per pair of schools) Ethnic High Educ Samples National Academy of Sciences Workshop Black Disabled Sample February 10-11, 2014 Saturation Puerto Rican Samples from 16 Schools Chinese Guidelines for Returning Individual Results from Genome Research Using Population- Main Sample 200/Community Based Banked Specimens Genetic CubanCuban Samples Carolyn Tucker Halpern University of North Carolina at Chapel Hill Unrelated Pairs Identical Twins Fraternal Twins Full Sibs Half Sibs in Same HH Social, Behavioral, and Biological Linkages Across the Life Course Social, Behavioral, and Biological Linkages Across the Life Course In-School In-Home Administration Administration Race and Ethnic Diversity in Add Health Wave I School Adolescents Race/Ethnicity N Unwtd. % Students Parent 1994-1995 Admin in grades 7-12 90,118 17,670 Mexico 1,767 8.5 (79%) 144 20,745 Cuba 508 2.5 Wave II School Adolescents Central-South America 647 3.1 1996 Admin in grades 8-12 Puerto Rico 570 2.8 (88.6%) 128 14,738 China 341 1.7 Wave III Young Adults Philippines 643 3.1 Partners 2001-2002 Aged 18-26 1,507 Other Asia 601 2.9 (77.4%) 15,197 Black (Africa/Afro-Caribbean) 4,601 22.2 Wave IV Adults Non-Hispanic White (Eur/Canada) 10,760 52.0 IIV -
Segregation Distortion and the Evolution of Sex-Determining Mechanisms
Heredity (2010) 104, 100–112 & 2010 Macmillan Publishers Limited All rights reserved 0018-067X/10 $32.00 www.nature.com/hdy ORIGINAL ARTICLE Segregation distortion and the evolution of sex-determining mechanisms M Kozielska1,2, FJ Weissing2, LW Beukeboom1 and I Pen2 1Evolutionary Genetics, University of Groningen, Haren, The Netherlands and 2Theoretical Biology, University of Groningen, Haren, The Netherlands Segregation distorters are alleles that distort normal segre- selection pressure, allowing novel sex-determining alleles to gation in their own favour. Sex chromosomal distorters lead spread. When distortion leads to female-biased sex ratios, a to biased sex ratios, and the presence of such distorters, new masculinizing gene can invade, leading to a new male therefore, may induce selection for a change in the heterogametic system. When distortion leads to male-biased mechanism of sex determination. The evolutionary dynamics sex ratios, a feminizing factor can invade and cause a switch of distorter-induced changes in sex determination has only to female heterogamety. In many cases, the distorter- been studied in some specific systems. Here, we present a induced change in the sex-determining system eventually generic model for this process. We consider three scenarios: leads to loss of the distorter from the population. Hence, the a driving X chromosome, a driving Y chromosome and a presence of sex chromosomal distorters will often only be driving autosome with a male-determining factor. We transient, and the distorters may remain unnoticed. The role investigate how the invasion prospects of a new sex- of segregation distortion in the evolution of sex determination determining factor are affected by the strength of distortion may, therefore, be underestimated. -
An Updated Primer
The new england journal of medicine review article Genomic Medicine W. Gregory Feero, M.D., Ph.D., and Alan E. Guttmacher, M.D., Editors Genomic Medicine — An Updated Primer W. Gregory Feero, M.D., Ph.D., Alan E. Guttmacher, M.D., and Francis S. Collins, M.D., Ph.D. Cathy, a 40-year-old mother of three, arrives in your office for her annual physical. From the National Human Genome Re- She has purchased a commercial genomewide scan (see the Glossary), which she be- search Institute (W.G.F.), the Eunice Ken- nedy Shriver National Institute of Child lieves measures the clinically meaningful risk that common diseases will develop, H e al t h an d Human D e ve l o p m e n t ( A . E .G .), and has completed her family history online using My Family Health Portrait (www and the Office of the Director (F.S.C.), .familyhistory.hhs.gov), a tool developed for this purpose by the U.S. Surgeon Gen- National Institutes of Health, Bethesda, MD; and the Maine Dartmouth Family eral. Her genomewide scan suggests a slightly elevated risk of breast cancer, but Medicine Residency Program, Augusta, you correctly recognize that this information is of unproven value in routine clinical ME (W.G.F.). Address reprint requests to care. On importing Cathy’s family-history file, your office’s electronic health record Dr. Feero at the National Human Ge- nome Research Institute, National Insti- system alerts you to the fact that Cathy is of Ashkenazi Jewish heritage and has sev- tutes of Health, Bldg. -
Genetic Testing for BRCA Mutations: a POLICY PAPER
Genetic testing for BRCA mutations: A POLICY PAPER 2019 This report was initiated and funded by Pfizer. Pfizer has provided funding to The Health Policy Partnership (HPP) for research, drafting and coordination. The report was written by Kirsten Budig, Jody Tate and Suzanne Wait from HPP under the guidance of a group of expert contributors. The experts contributed through telephone interviews and written comments, and were not financially compensated for their time. The following expert contributors were consulted and provided feedback during the development of this European-level report and the country profiles, for which we are hugely grateful. European-level report • Karen Benn, Deputy CEO/ Head of Public Affairs, Europa Donna • Antonella Cardone, Director, European Cancer Patient Coalition • Lydia Makaroff, former Director, European Cancer Patient Coalition; current Chief Executive Officer, Fight Bladder Cancer • Elżbieta Senkus-Konefka, Associate Professor at the Department of Oncology and Radiotherapy, Medical University of Gdańsk, Poland France country profile • Pascal Pujol, President, BRCA-France; Professor of Medical Genetics, Centre Hospitalier Universitaire de Montpellier • Dominique Stoppa-Lyonnet, Director of the Genetics Department, Institut Curie; Professor of Genetics, University Paris-Descartes Germany country profile • Rita Schmutzler, Director, Centre for Breast and Ovarian Cancer, Cologne • Evelin Schröck, Director, Institute for Clinical Genetics at the TU Dresden Ireland country profile • Liz Yeates, CEO, Marie -
Due to Broad-Sense Genetic Heritability
The Sociology of Heritability How (and Why) Sociologists Should Care About Heritability: Evidence from Misclassified Twins Dalton Conley* Emily Rauscher NYU & NBER NYU * To whom correspondence should be directed; 6 Washington Square North Room 20; New York, NY 10003. [email protected] The Sociology of Heritability Abstract We argue that despite many sociologists’ aversion to them, heritability estimates have critical policy relevance for a variety of social outcomes ranging from education to health to stratification. However, estimates have traditionally been plagued by genetic-environmental covariance, which is likely to be non-trivial and confound estimates of narrow-sense (additive) heritability for social and behavioral outcomes. Until recently, there has not been an effective way to address this concern and as a result, sociologists have largely dismissed the entire enterprise as methodologically flawed and ideologically-driven. Indeed, in a classic paper, Goldberger (1979) shows that by varying assumptions of the GE-covariance, a researcher can drive the estimated heritability of an outcome, such as IQ, down to zero or up close to one. Survey questions that attempt to measure directly the extent to which more genetically similar kin (such as monozygotic twins) also share more similar environmental conditions than, say, dizygotic twins, represent poor attempts to gauge a very complex underlying phenomenon of GE-covariance. Methods that rely on concordance between interviewer classification and self- report offer similar concerns about validity. In the present study, we take advantage of a natural experiment to address this issue from another angle: Misclassification of twin zygosity in the National Longitudinal Survey of Adolescent Health (Add Health). -
Genomic-Based Personalized Medicine (Reference Committee E)
REPORT 4 OF THE COUNCIL ON SCIENCE AND PUBLIC HEALTH (A-10) Genomic-based Personalized Medicine (Reference Committee E) EXECUTIVE SUMMARY Objectives. The term “personalized medicine” (PM) refers to health care that is informed by each person’s unique clinical, genetic, and environmental information. Clinical integration of PM technologies is enabling health care providers to more easily detect individual differences in susceptibility to particular diseases or in response to specific treatments, then tailor preventive and therapeutic interventions to maximize benefit and minimize harm. This report will review current status of genomic-based PM and challenges to implementing it, and will briefly summarize the activities of key federal agencies, professional organizations, coalitions, and health systems that are working to further the integration of genomic-based technologies into routine care. Data Sources. Literature searches were conducted in the PubMed database for English-language articles published between 2005 and 2010 using the search terms “personalized medicine” and “personalized medicine AND clinic.” To capture reports that may not have been indexed on PubMed, a Google search was also conducted using the search term “personalized medicine.” Additional articles were identified by review of the literature citations in articles and identified from the PubMed and Google searches. Results. Genetic testing has been a routine part of clinical care for a number of years in screening and diagnosis. Recently, a number of genomic-based applications have advanced beyond these screening and diagnostic techniques and are “personalizing” the delivery of care by enabling risk prediction, therapy, and prognosis that is tailored to individual patients. Yet there are challenges to the clinical implementation of PM, such as the lack of genetics knowledge among health care providers, slow generation of clinical validity and utility evidence, a fragmentary oversight and regulatory system, and lack of insurance coverage of PM technologies. -
Simulation Based Virtual Learning Environment in Medical Genetics
Makransky et al. BMC Medical Education (2016) 16:98 DOI 10.1186/s12909-016-0620-6 RESEARCH ARTICLE Open Access Simulation based virtual learning environment in medical genetics counseling: an example of bridging the gap between theory and practice in medical education Guido Makransky1*, Mads T. Bonde2, Julie S. G. Wulff1, Jakob Wandall3, Michelle Hood4, Peter A. Creed4, Iben Bache5,6, Asli Silahtaroglu5 and Anne Nørremølle5 Abstract Background: Simulation based learning environments are designed to improve the quality of medical education by allowing students to interact with patients, diagnostic laboratory procedures, and patient data in a virtual environment. However, few studies have evaluated whether simulation based learning environments increase students’ knowledge, intrinsic motivation, and self-efficacy, and help them generalize from laboratory analyses to clinical practice and health decision-making. Methods: An entire class of 300 University of Copenhagen first-year undergraduate students, most with a major in medicine, received a 2-h training session in a simulation based learning environment. The main outcomes were pre- to post- changes in knowledge, intrinsic motivation, and self-efficacy, together with post-intervention evaluation of the effect of the simulation on student understanding of everyday clinical practice were demonstrated. Results: Knowledge (Cohen’s d = 0.73), intrinsic motivation (d =0.24),andself-efficacy(d = 0.46) significantly increased from the pre- to post-test. Low knowledge students showed the greatest increases in knowledge (d =3.35)andself- efficacy (d = 0.61), but a non-significant increase in intrinsic motivation (d = 0.22). The medium and high knowledge students showed significant increases in knowledge (d = 1.45 and 0.36, respectively), motivation (d = 0.22 and 0.31), and self-efficacy (d = 0.36 and 0.52, respectively).