Syst. Biol. 67(1):32–48, 2018 © The Author(s) 2017. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. DOI:10.1093/sysbio/syx049 Advance Access publication May 8, 2017 Combined Analysis of Extant Rhynchonellida (Brachiopoda) using Morphological and Molecular Data ,∗ , DAV I D W. BAPST1 ,HOLLY A. SCHREIBER1 2, AND SANDRA J. CARLSON1 1Department of Earth and Planetary Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA; and 2Penn Dixie Fossil Park and Nature Reserve, 3556 Lakeshore Rd, Ste. 210 Blasdell, NY 14219, USA ∗ Correspondence to be sent to: Department of Earth and Planetary Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA; E-mail:
[email protected]. Received 5 August 2016; reviews returned 14 October 2016; accepted 28 April 2017 Associate Editor: Ken Halanych Abstract.—Independent molecular and morphological phylogenetic analyses have often produced discordant results for certain groups which, for fossil-rich groups, raises the possibility that morphological data might mislead in those groups for which we depend upon morphology the most. Rhynchonellide brachiopods, with more than 500 extinct genera but only 19 extant genera represented today, provide an opportunity to explore the factors that produce contentious phylogenetic signal across datasets, as previous phylogenetic hypotheses generated from molecular sequence data bear little agreement with those constructed using morphological characters.