Molecular Orbital Theory
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Chemistry 2000 Slide Set 1: Introduction to the Molecular Orbital Theory
Chemistry 2000 Slide Set 1: Introduction to the molecular orbital theory Marc R. Roussel January 2, 2020 Marc R. Roussel Introduction to molecular orbitals January 2, 2020 1 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Hydrogenic atoms The hydrogenic atom (one nucleus, one electron) is exactly solvable. The solutions of this problem are called atomic orbitals. The square of the orbital wavefunction gives a probability density for the electron, i.e. the probability per unit volume of finding the electron near a particular point in space. Marc R. Roussel Introduction to molecular orbitals January 2, 2020 2 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Hydrogenic atoms (continued) Orbital shapes: 1s 2p 3dx2−y 2 3dz2 Marc R. Roussel Introduction to molecular orbitals January 2, 2020 3 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Multielectron atoms Consider He, the simplest multielectron atom: Electron-electron repulsion makes it impossible to solve for the electronic wavefunctions exactly. A fourth quantum number, ms , which is associated with a new type of angular momentum called spin, enters into the theory. 1 1 For electrons, ms = 2 or − 2 . Pauli exclusion principle: No two electrons can have identical sets of quantum numbers. Consequence: Only two electrons can occupy an orbital. Marc R. Roussel Introduction to molecular orbitals January 2, 2020 4 / 24 The hydrogen molecular ion The quantum mechanics of molecules + H2 is the simplest possible molecule: two nuclei one electron Three-body problem: no exact solutions However, the nuclei are more than 1800 time heavier than the electron, so the electron moves much faster than the nuclei. -
Magnetism, Magnetic Properties, Magnetochemistry
Magnetism, Magnetic Properties, Magnetochemistry 1 Magnetism All matter is electronic Positive/negative charges - bound by Coulombic forces Result of electric field E between charges, electric dipole Electric and magnetic fields = the electromagnetic interaction (Oersted, Maxwell) Electric field = electric +/ charges, electric dipole Magnetic field ??No source?? No magnetic charges, N-S No magnetic monopole Magnetic field = motion of electric charges (electric current, atomic motions) Magnetic dipole – magnetic moment = i A [A m2] 2 Electromagnetic Fields 3 Magnetism Magnetic field = motion of electric charges • Macro - electric current • Micro - spin + orbital momentum Ampère 1822 Poisson model Magnetic dipole – magnetic (dipole) moment [A m2] i A 4 Ampere model Magnetism Microscopic explanation of source of magnetism = Fundamental quantum magnets Unpaired electrons = spins (Bohr 1913) Atomic building blocks (protons, neutrons and electrons = fermions) possess an intrinsic magnetic moment Relativistic quantum theory (P. Dirac 1928) SPIN (quantum property ~ rotation of charged particles) Spin (½ for all fermions) gives rise to a magnetic moment 5 Atomic Motions of Electric Charges The origins for the magnetic moment of a free atom Motions of Electric Charges: 1) The spins of the electrons S. Unpaired spins give a paramagnetic contribution. Paired spins give a diamagnetic contribution. 2) The orbital angular momentum L of the electrons about the nucleus, degenerate orbitals, paramagnetic contribution. The change in the orbital moment -
Theoretical Methods That Help Understanding the Structure and Reactivity of Gas Phase Ions
International Journal of Mass Spectrometry 240 (2005) 37–99 Review Theoretical methods that help understanding the structure and reactivity of gas phase ions J.M. Merceroa, J.M. Matxaina, X. Lopeza, D.M. Yorkb, A. Largoc, L.A. Erikssond,e, J.M. Ugaldea,∗ a Kimika Fakultatea, Euskal Herriko Unibertsitatea, P.K. 1072, 20080 Donostia, Euskadi, Spain b Department of Chemistry, University of Minnesota, 207 Pleasant St. SE, Minneapolis, MN 55455-0431, USA c Departamento de Qu´ımica-F´ısica, Universidad de Valladolid, Prado de la Magdalena, 47005 Valladolid, Spain d Department of Cell and Molecular Biology, Box 596, Uppsala University, 751 24 Uppsala, Sweden e Department of Natural Sciences, Orebro¨ University, 701 82 Orebro,¨ Sweden Received 27 May 2004; accepted 14 September 2004 Available online 25 November 2004 Abstract The methods of the quantum electronic structure theory are reviewed and their implementation for the gas phase chemistry emphasized. Ab initio molecular orbital theory, density functional theory, quantum Monte Carlo theory and the methods to calculate the rate of complex chemical reactions in the gas phase are considered. Relativistic effects, other than the spin–orbit coupling effects, have not been considered. Rather than write down the main equations without further comments on how they were obtained, we provide the reader with essentials of the background on which the theory has been developed and the equations derived. We committed ourselves to place equations in their own proper perspective, so that the reader can appreciate more profoundly the subtleties of the theory underlying the equations themselves. Finally, a number of examples that illustrate the application of the theory are presented and discussed. -
Introduction to Molecular Orbital Theory
Chapter 2: Molecular Structure and Bonding Bonding Theories 1. VSEPR Theory 2. Valence Bond theory (with hybridization) 3. Molecular Orbital Theory ( with molecualr orbitals) To date, we have looked at three different theories of molecular boning. They are the VSEPR Theory (with Lewis Dot Structures), the Valence Bond theory (with hybridization) and Molecular Orbital Theory. A good theory should predict physical and chemical properties of the molecule such as shape, bond energy, bond length, and bond angles.Because arguments based on atomic orbitals focus on the bonds formed between valence electrons on an atom, they are often said to involve a valence-bond theory. The valence-bond model can't adequately explain the fact that some molecules contains two equivalent bonds with a bond order between that of a single bond and a double bond. The best it can do is suggest that these molecules are mixtures, or hybrids, of the two Lewis structures that can be written for these molecules. This problem, and many others, can be overcome by using a more sophisticated model of bonding based on molecular orbitals. Molecular orbital theory is more powerful than valence-bond theory because the orbitals reflect the geometry of the molecule to which they are applied. But this power carries a significant cost in terms of the ease with which the model can be visualized. One model does not describe all the properties of molecular bonds. Each model desribes a set of properties better than the others. The final test for any theory is experimental data. Introduction to Molecular Orbital Theory The Molecular Orbital Theory does a good job of predicting elctronic spectra and paramagnetism, when VSEPR and the V-B Theories don't. -
8.3 Bonding Theories >
8.3 Bonding Theories > Chapter 8 Covalent Bonding 8.1 Molecular Compounds 8.2 The Nature of Covalent Bonding 8.3 Bonding Theories 8.4 Polar Bonds and Molecules 1 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Molecular Orbitals How are atomic and molecular orbitals related? 2 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • The model you have been using for covalent bonding assumes the orbitals are those of the individual atoms. • There is a quantum mechanical model of bonding, however, that describes the electrons in molecules using orbitals that exist only for groupings of atoms. 3 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • When two atoms combine, this model assumes that their atomic orbitals overlap to produce molecular orbitals, or orbitals that apply to the entire molecule. 4 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Just as an atomic orbital belongs to a particular atom, a molecular orbital belongs to a molecule as a whole. • A molecular orbital that can be occupied by two electrons of a covalent bond is called a bonding orbital. 5 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Sigma Bonds When two atomic orbitals combine to form a molecular orbital that is symmetrical around the axis connecting two atomic nuclei, a sigma bond is formed. • Its symbol is the Greek letter sigma (σ). -
Covalent Bonding and Molecular Orbitals
Covalent Bonding and Molecular Orbitals Chemistry 35 Fall 2000 From Atoms to Molecules: The Covalent Bond n So, what happens to e- in atomic orbitals when two atoms approach and form a covalent bond? Mathematically: -let’s look at the formation of a hydrogen molecule: -we start with: 1 e-/each in 1s atomic orbitals -we’ll end up with: 2 e- in molecular obital(s) HOW? Make linear combinations of the 1s orbital wavefunctions: ymol = y1s(A) ± y1s(B) Then, solve via the SWE! 2 1 Hydrogen Wavefunctions wavefunctions probability densities 3 Hydrogen Molecular Orbitals anti-bonding bonding 4 2 Hydrogen MO Formation: Internuclear Separation n SWE solved with nuclei at a specific separation distance . How does the energy of the new MO vary with internuclear separation? movie 5 MO Theory: Homonuclear Diatomic Molecules n Let’s look at the s-bonding properties of some homonuclear diatomic molecules: Bond order = ½(bonding e- - anti-bonding e-) For H2: B.O. = 1 - 0 = 1 (single bond) For He2: B.O. = 1 - 1 = 0 (no bond) 6 3 Configurations and Bond Orders: 1st Period Diatomics Species Config. B.O. Energy Length + 1 H2 (s1s) ½ 255 kJ/mol 1.06 Å 2 H2 (s1s) 1 431 kJ/mol 0.74 Å + 2 * 1 He2 (s1s) (s 1s) ½ 251 kJ/mol 1.08 Å 2 * 2 He2 (s1s) (s 1s) 0 ~0 LARGE 7 Combining p-orbitals: s and p MO’s antibonding end-on overlap bonding antibonding side-on overlap bonding antibonding bonding8 4 2nd Period MO Energies s2p has lowest energy due to better overlap (end-on) of 2pz orbitals p2p orbitals are degenerate and at higher energy than the s2p 9 2nd Period MO Energies: Shift! For Z <8: 2s and 2p orbitals can interact enough to change energies of the resulting s2s and s2p MOs. -
3-MO Theory(U).Pptx
Molecular Orbital Theory Valence Bond Theory: Electrons are located in discrete pairs between specific atoms Molecular Orbital Theory: Electrons are located in the molecule, not held in discrete regions between two bonded atoms Thus the main difference between these theories is where the electrons are located, in valence bond theory we predict the electrons are always held between two bonded atoms and in molecular orbital theory the electrons are merely held “somewhere” in molecule Mathematically can represent molecule by a linear combination of atomic orbitals (LCAO) ΨMOL = c1 φ1 + c2 φ2 + c3 φ3 + cn φn Where Ψ2 = spatial distribution of electrons If the ΨMOL can be determined, then where the electrons are located can also be determined 66 Building Molecular Orbitals from Atomic Orbitals Similar to a wave function that can describe the regions of space where electrons reside on time average for an atom, when two (or more) atoms react to form new bonds, the region where the electrons reside in the new molecule are described by a new wave function This new wave function describes molecular orbitals instead of atomic orbitals Mathematically, these new molecular orbitals are simply a combination of the atomic wave functions (e.g LCAO) Hydrogen 1s H-H bonding atomic orbital molecular orbital 67 Building Molecular Orbitals from Atomic Orbitals An important consideration, however, is that the number of wave functions (molecular orbitals) resulting from the mixing process must equal the number of wave functions (atomic orbitals) used in the mixing -
Simple Molecular Orbital Theory Chapter 5
Simple Molecular Orbital Theory Chapter 5 Wednesday, October 7, 2015 Using Symmetry: Molecular Orbitals One approach to understanding the electronic structure of molecules is called Molecular Orbital Theory. • MO theory assumes that the valence electrons of the atoms within a molecule become the valence electrons of the entire molecule. • Molecular orbitals are constructed by taking linear combinations of the valence orbitals of atoms within the molecule. For example, consider H2: 1s + 1s + • Symmetry will allow us to treat more complex molecules by helping us to determine which AOs combine to make MOs LCAO MO Theory MO Math for Diatomic Molecules 1 2 A ------ B Each MO may be written as an LCAO: cc11 2 2 Since the probability density is given by the square of the wavefunction: probability of finding the ditto atom B overlap term, important electron close to atom A between the atoms MO Math for Diatomic Molecules 1 1 S The individual AOs are normalized: 100% probability of finding electron somewhere for each free atom MO Math for Homonuclear Diatomic Molecules For two identical AOs on identical atoms, the electrons are equally shared, so: 22 cc11 2 2 cc12 In other words: cc12 So we have two MOs from the two AOs: c ,1() 1 2 c ,1() 1 2 2 2 After normalization (setting d 1 and _ d 1 ): 1 1 () () [2(1 S )]1/2 12 [2(1 S )]1/2 12 where S is the overlap integral: 01 S LCAO MO Energy Diagram for H2 H2 molecule: two 1s atomic orbitals combine to make one bonding and one antibonding molecular orbital. -
Electromagnetic Radiation and Quantum Theory Questions KEY
Electromagnetic Radiation and Quantum Theory Questions KEY What you will be given for the test: A periodic table (you cannot use the blank one where you filled in the electron configuration) c=λv c=3.0x108 m/s E=hv h=6.626x10-34 J*s For the test, you should be able to answer these questions…. 1. What does ROY G. BV represent? The colors of the visible light portion of the electromagnetic spectrum. 2. How does the energy of a red photon compare to that of a blue photon? Explain. A blue photon has higher energy than a red photon. Blue photons have a shorter wavelength and therefore a higher frequency and higher energy. 3. According to the Bohr model of the hydrogen atom, how does the hydrogen atom emit light? When an electron absorbs energy, it jumps to a higher energy level. When the electron falls back down, energy is released from the atom in the form of light. 4. What is the difference between an electron at ground state and an excited electron? A ground state electron is the lowest possible energy for that electron. An excited electron is one that has absorbed energy and is in a higher energy level. 5. What accounts for different color lines (red, blue-green, blue, and violet) in the emission spectrum of the hydrogen atom? The electron releases different amounts of energy has it drops to different energy levels. Each of these drops in energies corresponds to a specific frequency and color of light. 6. Can two different elements produce the same identical emissions spectrum? No two elements can produce the same emission spectrum, it is similar to a fingerprint for an atom. -
Conjugated Systems, Orbital Symmetry and UV Spectroscopy
Conjugated Systems, Orbital Symmetry and UV Spectroscopy Introduction There are several possible arrangements for a molecule which contains two double bonds (diene): Isolated: (two or more single bonds between them) Conjugated: (one single bond between them) Cumulated: (zero single bonds between them: allenes) Conjugated double bonds are found to be the most stable. Ch15 Conjugated Systems (landscape).docx Page 1 Stabilities Recall that heat of hydrogenation data showed us that di-substituted double bonds are more stable than mono- substituted double bonds. H2, Pt Ho= -30.0kcal H2, Pt Ho= -27.4kcal When a molecule has two isolated double bonds, the heat of hydrogenation is essentially equal to the sum of the values for the individual double bonds. H2, Pt Ho= -60.2kcal For conjugated dienes, the heat of hydrogenation is less than the sum of the individual double bonds. H2, Pt Ho= -53.7kcal The conjugated diene is more stable by about 3.7kcal/mol. (Predicted –30 + (–27.4) = –57.4kcal, observed –53.7kcal). Ch15 Conjugated Systems (landscape).docx Page 2 Allenes, which have cumulated double bonds are less stable than isolated double bonds. H H H2, Pt C C C Ho= -69.8kcal H CH2CH3 Increasing Stability Order (least to most stable): Cumulated diene -69.8kcal Terminal alkyne -69.5kcal Internal alkyne -65.8kcal Isolated diene -57.4kcal Conjugated diene -53.7kcal Ch15 Conjugated Systems (landscape).docx Page 3 Molecular Orbital (M.O.) Picture The extra stability of conjugated double bonds versus the analogous isolated double bond compound is termed the resonance energy. Consider buta-1,3-diene: H2, Pt Ho= -30.1kcal H2, Pt Ho= -56.6kcal (2 x –30.1 = –60.2kcal). -
Structure Controlled Magnetism in Mg-Ti-O Thin Films
In Quest of a Ferromagnetic Insulator - Structure Controlled Magnetism in Mg-Ti-O Thin Films Johannes Frantti*,1, Yukari Fujioka1, Christopher Rouleau2, Alexandra Steffen3, Alexander Puretzky2, Nickolay Lavrik2, Ilia N. Ivanov2 and Harry M. Meyer2 1Finnish Research and Engineering, Helsinki 00180, Finland 2Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA 3Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA *Corresponding author: e-mail johannes.frantti@fre.fi 1 Abstract Ferromagnetic insulator thin films can convey information by spin waves, avoiding charge displacement and Eddy current losses. The sparsity of high-temperature insulating ferromagnetic materials hinders the development of spin wave based devices. Stoichiometric magnesium titanate, MgTiO3, has an electronic- energy-band structure in which all bands are either full or empty, being a paramagnetic insulator. The MgTiO3 ilmenite consists of ordered octahedra and cation network in which one third of the octahedra are vacant, one third host magnesium and one third titanium. By giving up these characteristics, a rich variety of different magnetic structures can be formed. Our experiments and electronic-energy-band-structure computations show that the magnetic and electric properties of Mg-Ti-O films can drastically be changed and controlled by Mg- and Ti-cation arrangement and abundancy in the octahedra. Insulating titanium- and semiconducting magnesium-rich films were ferromagnetic up to elevated temperatures. The presence and origin of ferromagnetic insulating phase in the films is not apparent - the expectation, based on the well- established rules set by Goodenough and Kanamori, is paramagnetic or antiferromagnetic ordering. We show that ferro- and paramagnetic phases, possessing the same stoichiometry, can be obtained by merely rearranging the cations, thus allowing defect-free interfaces in multilayer structures. -
Nitric Oxide: a Brief Overview of Chemical and Physical Properties Relevant to Therapeutic Applications
SPECIAL FOCUS y Nitric oxide-releasing materials Special Report For reprint orders, please contact [email protected] 1 Special Report 2015/06/30 Nitric oxide: a brief overview of chemical and physical properties relevant to therapeutic applications Future Sci. OA Nitric oxide (nitrogen monoxide, •NO) has been intensively studied by chemists and Jack R Lancaster Jr physicists for over 200 years and thus there is an extensive database of information Departments of Pharmacology & that determines its biological actions. This is a very brief overview of the chemical and Chemical Biology, Medicine, & Surgery, School of Medicine, University of physical properties of •NO that are most relevant to Biology in general and to the Pittsburgh, 4200 Fifth Ave, Pittsburgh, 1(1), FSO59 development of •NO releasing materials in particular. PA 15260, USA [email protected] Keywords: diffusion • oxidation-reduction • radical • transition metals In 1987 the startling discovery was made electron. This is due to the fact that it has that the small reactive radical molecule an odd total number of electrons (15). The nitric oxide (•NO; nitrogen monoxide) is property of possessing an unpaired electron specifically produced and functions as a is called paramagnetism and it is this prop major messenger in the mammalian cardio erty that most determines its chemical reac vascular system, for which the 1998 Nobel tivity. However, the small uncharged nature Prize in Physiology or Medicine was awarded of •NO is especially important in determin to Robert Furchgott, Louis Ignarro and Ferid ing mechanisms for its selective delivery, the Murad [1] . This discovery represented a classi topic of this monograph.