Kernel Methods
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Large-Scale Kernel Ranksvm
Large-scale Kernel RankSVM Tzu-Ming Kuo∗ Ching-Pei Leey Chih-Jen Linz Abstract proposed [11, 23, 5, 1, 14]. However, for some tasks that Learning to rank is an important task for recommendation the feature set is not rich enough, nonlinear methods systems, online advertisement and web search. Among may be needed. Therefore, it is important to develop those learning to rank methods, rankSVM is a widely efficient training methods for large kernel rankSVM. used model. Both linear and nonlinear (kernel) rankSVM Assume we are given a set of training label-query- have been extensively studied, but the lengthy training instance tuples (yi; qi; xi); yi 2 R; qi 2 S ⊂ Z; xi 2 n time of kernel rankSVM remains a challenging issue. In R ; i = 1; : : : ; l, where S is the set of queries. By this paper, after discussing difficulties of training kernel defining the set of preference pairs as rankSVM, we propose an efficient method to handle these (1.1) P ≡ f(i; j) j q = q ; y > y g with p ≡ jP j; problems. The idea is to reduce the number of variables from i j i j quadratic to linear with respect to the number of training rankSVM [10] solves instances, and efficiently evaluate the pairwise losses. Our setting is applicable to a variety of loss functions. Further, 1 T X min w w + C ξi;j general optimization methods can be easily applied to solve w;ξ 2 (i;j)2P the reformulated problem. Implementation issues are also (1.2) subject to wT (φ (x ) − φ (x )) ≥ 1 − ξ ; carefully considered. -
A Kernel Method for Multi-Labelled Classification
A kernel method for multi-labelled classification Andre´ Elisseeff and Jason Weston BIOwulf Technologies, 305 Broadway, New York, NY 10007 andre,jason ¡ @barhilltechnologies.com Abstract This article presents a Support Vector Machine (SVM) like learning sys- tem to handle multi-label problems. Such problems are usually decom- posed into many two-class problems but the expressive power of such a system can be weak [5, 7]. We explore a new direct approach. It is based on a large margin ranking system that shares a lot of common proper- ties with SVMs. We tested it on a Yeast gene functional classification problem with positive results. 1 Introduction Many problems in Text Mining or Bioinformatics are multi-labelled. That is, each point in a learning set is associated to a set of labels. Consider for instance the classification task of determining the subjects of a document, or of relating one protein to its many effects on a cell. In either case, the learning task would be to output a set of labels whose size is not known in advance: one document can for instance be about food, meat and finance, although another one would concern only food and fat. Two-class and multi-class classification or ordinal regression problems can all be cast into multi-label ones. This makes the latter quite attractive but at the same time it gives a warning: their generality hides their difficulty to solve them. The number of publications is not going to contradict this statement: we are aware of only a few works about the subject [4, 5, 7] and they all concern text mining applications. -
Density Based Data Clustering
California State University, San Bernardino CSUSB ScholarWorks Electronic Theses, Projects, and Dissertations Office of aduateGr Studies 3-2015 Density Based Data Clustering Rayan Albarakati California State University - San Bernardino Follow this and additional works at: https://scholarworks.lib.csusb.edu/etd Part of the Other Computer Engineering Commons Recommended Citation Albarakati, Rayan, "Density Based Data Clustering" (2015). Electronic Theses, Projects, and Dissertations. 134. https://scholarworks.lib.csusb.edu/etd/134 This Project is brought to you for free and open access by the Office of aduateGr Studies at CSUSB ScholarWorks. It has been accepted for inclusion in Electronic Theses, Projects, and Dissertations by an authorized administrator of CSUSB ScholarWorks. For more information, please contact [email protected]. California State University, San Bernardino CSUSB ScholarWorks Electronic Theses, Projects, and Dissertations Office of Graduate Studies 3-2015 Density Based Data Clustering Rayan Albarakati Follow this and additional works at: http://scholarworks.lib.csusb.edu/etd This Project is brought to you for free and open access by the Office of Graduate Studies at CSUSB ScholarWorks. It has been accepted for inclusion in Electronic Theses, Projects, and Dissertations by an authorized administrator of CSUSB ScholarWorks. For more information, please contact [email protected], [email protected]. DESNITY BASED DATA CLUSTERING A Project Presented to the Faculty of California State University, San Bernardino In Partial Fulfillment of the Requirements for the Degree Master of Science in Computer Science by Rayan Albarakati March 2015 DESNITY BASED DATA CLUSTERING A Project Presented to the Faculty of California State University, San Bernardino by Rayan Albarakati March 2015 Approved by: Haiyan Qiao, Advisor, School of Computer Date Science and Engineering Owen J.Murphy Krestin Voigt © 2015 Rayan Albarakati ABSTRACT Data clustering is a data analysis technique that groups data based on a measure of similarity. -
Kernel and Image
Math 217 Worksheet 1 February: x3.1 Professor Karen E Smith (c)2015 UM Math Dept licensed under a Creative Commons By-NC-SA 4.0 International License. T Definitions: Given a linear transformation V ! W between vector spaces, we have 1. The source or domain of T is V ; 2. The target of T is W ; 3. The image of T is the subset of the target f~y 2 W j ~y = T (~x) for some x 2 Vg: 4. The kernel of T is the subset of the source f~v 2 V such that T (~v) = ~0g. Put differently, the kernel is the pre-image of ~0. Advice to the new mathematicians from an old one: In encountering new definitions and concepts, n m please keep in mind concrete examples you already know|in this case, think about V as R and W as R the first time through. How does the notion of a linear transformation become more concrete in this special case? Think about modeling your future understanding on this case, but be aware that there are other important examples and there are important differences (a linear map is not \a matrix" unless *source and target* are both \coordinate spaces" of column vectors). The goal is to become comfortable with the abstract idea of a vector space which embodies many n features of R but encompasses many other kinds of set-ups. A. For each linear transformation below, determine the source, target, image and kernel. 2 3 x1 3 (a) T : R ! R such that T (4x25) = x1 + x2 + x3. -
A User's Guide to Support Vector Machines
A User's Guide to Support Vector Machines Asa Ben-Hur Jason Weston Department of Computer Science NEC Labs America Colorado State University Princeton, NJ 08540 USA Abstract The Support Vector Machine (SVM) is a widely used classifier. And yet, obtaining the best results with SVMs requires an understanding of their workings and the various ways a user can influence their accuracy. We provide the user with a basic understanding of the theory behind SVMs and focus on their use in practice. We describe the effect of the SVM parameters on the resulting classifier, how to select good values for those parameters, data normalization, factors that affect training time, and software for training SVMs. 1 Introduction The Support Vector Machine (SVM) is a state-of-the-art classification method introduced in 1992 by Boser, Guyon, and Vapnik [1]. The SVM classifier is widely used in bioinformatics (and other disciplines) due to its high accuracy, ability to deal with high-dimensional data such as gene ex- pression, and flexibility in modeling diverse sources of data [2]. SVMs belong to the general category of kernel methods [4, 5]. A kernel method is an algorithm that depends on the data only through dot-products. When this is the case, the dot product can be replaced by a kernel function which computes a dot product in some possibly high dimensional feature space. This has two advantages: First, the ability to generate non-linear decision boundaries using methods designed for linear classifiers. Second, the use of kernel functions allows the user to apply a classifier to data that have no obvious fixed-dimensional vector space representation. -
The Forgetron: a Kernel-Based Perceptron on a Fixed Budget
The Forgetron: A Kernel-Based Perceptron on a Fixed Budget Ofer Dekel Shai Shalev-Shwartz Yoram Singer School of Computer Science & Engineering The Hebrew University, Jerusalem 91904, Israel oferd,shais,singer @cs.huji.ac.il { } Abstract The Perceptron algorithm, despite its simplicity, often performs well on online classification problems. The Perceptron becomes especially effec- tive when it is used in conjunction with kernels. However, a common dif- ficulty encountered when implementing kernel-based online algorithms is the amount of memory required to store the online hypothesis, which may grow unboundedly. In this paper we describe and analyze a new in- frastructure for kernel-based learning with the Perceptron while adhering to a strict limit on the number of examples that can be stored. We first describe a template algorithm, called the Forgetron, for online learning on a fixed budget. We then provide specific algorithms and derive a uni- fied mistake bound for all of them. To our knowledge, this is the first online learning paradigm which, on one hand, maintains a strict limit on the number of examples it can store and, on the other hand, entertains a relative mistake bound. We also present experiments with real datasets which underscore the merits of our approach. 1 Introduction The introduction of the Support Vector Machine (SVM) [7] sparked a widespread interest in kernel methods as a means of solving (binary) classification problems. Although SVM was initially stated as a batch-learning technique, it significantly influenced the develop- ment of kernel methods in the online-learning setting. Online classification algorithms that can incorporate kernels include the Perceptron [6], ROMMA [5], ALMA [3], NORMA [4] and the Passive-Aggressive family of algorithms [1]. -
Math 120 Homework 3 Solutions
Math 120 Homework 3 Solutions Xiaoyu He, with edits by Prof. Church April 21, 2018 [Note from Prof. Church: solutions to starred problems may not include all details or all portions of the question.] 1.3.1* Let σ be the permutation 1 7! 3; 2 7! 4; 3 7! 5; 4 7! 2; 5 7! 1 and let τ be the permutation 1 7! 5; 2 7! 3; 3 7! 2; 4 7! 4; 5 7! 1. Find the cycle decompositions of each of the following permutations: σ; τ; σ2; στ; τσ; τ 2σ. The cycle decompositions are: σ = (135)(24) τ = (15)(23)(4) σ2 = (153)(2)(4) στ = (1)(2534) τσ = (1243)(5) τ 2σ = (135)(24): 1.3.7* Write out the cycle decomposition of each element of order 2 in S4. Elements of order 2 are also called involutions. There are six formed from a single transposition, (12); (13); (14); (23); (24); (34), and three from pairs of transpositions: (12)(34); (13)(24); (14)(23). 3.1.6* Define ' : R× ! {±1g by letting '(x) be x divided by the absolute value of x. Describe the fibers of ' and prove that ' is a homomorphism. The fibers of ' are '−1(1) = (0; 1) = fall positive realsg and '−1(−1) = (−∞; 0) = fall negative realsg. 3.1.7* Define π : R2 ! R by π((x; y)) = x + y. Prove that π is a surjective homomorphism and describe the kernel and fibers of π geometrically. The map π is surjective because e.g. π((x; 0)) = x. The kernel of π is the line y = −x through the origin. -
Kernel Methods Through the Roof: Handling Billions of Points Efficiently
Kernel methods through the roof: handling billions of points efficiently Giacomo Meanti Luigi Carratino MaLGa, DIBRIS MaLGa, DIBRIS Università degli Studi di Genova Università degli Studi di Genova [email protected] [email protected] Lorenzo Rosasco Alessandro Rudi MaLGa, DIBRIS, IIT & MIT INRIA - École Normale Supérieure Università degli Studi di Genova PSL Research University [email protected] [email protected] Abstract Kernel methods provide an elegant and principled approach to nonparametric learning, but so far could hardly be used in large scale problems, since naïve imple- mentations scale poorly with data size. Recent advances have shown the benefits of a number of algorithmic ideas, for example combining optimization, numerical linear algebra and random projections. Here, we push these efforts further to develop and test a solver that takes full advantage of GPU hardware. Towards this end, we designed a preconditioned gradient solver for kernel methods exploiting both GPU acceleration and parallelization with multiple GPUs, implementing out-of-core variants of common linear algebra operations to guarantee optimal hardware utilization. Further, we optimize the numerical precision of different operations and maximize efficiency of matrix-vector multiplications. As a result we can experimentally show dramatic speedups on datasets with billions of points, while still guaranteeing state of the art performance. Additionally, we make our software available as an easy to use library1. 1 Introduction Kernel methods provide non-linear/non-parametric extensions of many classical linear models in machine learning and statistics [45, 49]. The data are embedded via a non-linear map into a high dimensional feature space, so that linear models in such a space effectively define non-linear models in the original space. -
Discrete Topological Transformations for Image Processing Michel Couprie, Gilles Bertrand
Discrete Topological Transformations for Image Processing Michel Couprie, Gilles Bertrand To cite this version: Michel Couprie, Gilles Bertrand. Discrete Topological Transformations for Image Processing. Brimkov, Valentin E. and Barneva, Reneta P. Digital Geometry Algorithms, 2, Springer, pp.73-107, 2012, Lecture Notes in Computational Vision and Biomechanics, 978-94-007-4174-4. 10.1007/978-94- 007-4174-4_3. hal-00727377 HAL Id: hal-00727377 https://hal-upec-upem.archives-ouvertes.fr/hal-00727377 Submitted on 3 Sep 2012 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Chapter 3 Discrete Topological Transformations for Image Processing Michel Couprie and Gilles Bertrand Abstract Topology-based image processing operators usually aim at trans- forming an image while preserving its topological characteristics. This chap- ter reviews some approaches which lead to efficient and exact algorithms for topological transformations in 2D, 3D and grayscale images. Some transfor- mations which modify topology in a controlled manner are also described. Finally, based on the framework of critical kernels, we show how to design a topologically sound parallel thinning algorithm guided by a priority function. 3.1 Introduction Topology-preserving operators, such as homotopic thinning and skeletoniza- tion, are used in many applications of image analysis to transform an object while leaving unchanged its topological characteristics. -
Kernel Methodsmethods Simple Idea of Data Fitting
KernelKernel MethodsMethods Simple Idea of Data Fitting Given ( xi,y i) i=1,…,n xi is of dimension d Find the best linear function w (hyperplane) that fits the data Two scenarios y: real, regression y: {-1,1}, classification Two cases n>d, regression, least square n<d, ridge regression New sample: x, < x,w> : best fit (regression), best decision (classification) 2 Primary and Dual There are two ways to formulate the problem: Primary Dual Both provide deep insight into the problem Primary is more traditional Dual leads to newer techniques in SVM and kernel methods 3 Regression 2 w = arg min ∑(yi − wo − ∑ xij w j ) W i j w = arg min (y − Xw )T (y − Xw ) W d(y − Xw )T (y − Xw ) = 0 dw ⇒ XT (y − Xw ) = 0 w = [w , w ,L, w ]T , ⇒ T T o 1 d X Xw = X y L T x = ,1[ x1, , xd ] , T −1 T ⇒ w = (X X) X y y = [y , y ,L, y ]T ) 1 2 n T −1 T xT y =< x (, X X) X y > 1 xT X = 2 M xT 4 n n×xd Graphical Interpretation ) y = Xw = Hy = X(XT X)−1 XT y = X(XT X)−1 XT y d X= n FICA Income X is a n (sample size) by d (dimension of data) matrix w combines the columns of X to best approximate y Combine features (FICA, income, etc.) to decisions (loan) H projects y onto the space spanned by columns of X Simplify the decisions to fit the features 5 Problem #1 n=d, exact solution n>d, least square, (most likely scenarios) When n < d, there are not enough constraints to determine coefficients w uniquely d X= n W 6 Problem #2 If different attributes are highly correlated (income and FICA) The columns become dependent Coefficients -
Abelian Categories
Abelian Categories Lemma. In an Ab-enriched category with zero object every finite product is coproduct and conversely. π1 Proof. Suppose A × B //A; B is a product. Define ι1 : A ! A × B and π2 ι2 : B ! A × B by π1ι1 = id; π2ι1 = 0; π1ι2 = 0; π2ι2 = id: It follows that ι1π1+ι2π2 = id (both sides are equal upon applying π1 and π2). To show that ι1; ι2 are a coproduct suppose given ' : A ! C; : B ! C. It φ : A × B ! C has the properties φι1 = ' and φι2 = then we must have φ = φid = φ(ι1π1 + ι2π2) = ϕπ1 + π2: Conversely, the formula ϕπ1 + π2 yields the desired map on A × B. An additive category is an Ab-enriched category with a zero object and finite products (or coproducts). In such a category, a kernel of a morphism f : A ! B is an equalizer k in the diagram k f ker(f) / A / B: 0 Dually, a cokernel of f is a coequalizer c in the diagram f c A / B / coker(f): 0 An Abelian category is an additive category such that 1. every map has a kernel and a cokernel, 2. every mono is a kernel, and every epi is a cokernel. In fact, it then follows immediatly that a mono is the kernel of its cokernel, while an epi is the cokernel of its kernel. 1 Proof of last statement. Suppose f : B ! C is epi and the cokernel of some g : A ! B. Write k : ker(f) ! B for the kernel of f. Since f ◦ g = 0 the map g¯ indicated in the diagram exists. -
An Algorithmic Introduction to Clustering
AN ALGORITHMIC INTRODUCTION TO CLUSTERING APREPRINT Bernardo Gonzalez Department of Computer Science and Engineering UCSC [email protected] June 11, 2020 The purpose of this document is to provide an easy introductory guide to clustering algorithms. Basic knowledge and exposure to probability (random variables, conditional probability, Bayes’ theorem, independence, Gaussian distribution), matrix calculus (matrix and vector derivatives), linear algebra and analysis of algorithm (specifically, time complexity analysis) is assumed. Starting with Gaussian Mixture Models (GMM), this guide will visit different algorithms like the well-known k-means, DBSCAN and Spectral Clustering (SC) algorithms, in a connected and hopefully understandable way for the reader. The first three sections (Introduction, GMM and k-means) are based on [1]. The fourth section (SC) is based on [2] and [5]. Fifth section (DBSCAN) is based on [6]. Sixth section (Mean Shift) is, to the best of author’s knowledge, original work. Seventh section is dedicated to conclusions and future work. Traditionally, these five algorithms are considered completely unrelated and they are considered members of different families of clustering algorithms: • Model-based algorithms: the data are viewed as coming from a mixture of probability distributions, each of which represents a different cluster. A Gaussian Mixture Model is considered a member of this family • Centroid-based algorithms: any data point in a cluster is represented by the central vector of that cluster, which need not be a part of the dataset taken. k-means is considered a member of this family • Graph-based algorithms: the data is represented using a graph, and the clustering procedure leverage Graph theory tools to create a partition of this graph.