The Role of Phosphatidylserine in Recognition of Apoptotic Cells by Phagocytes

Total Page:16

File Type:pdf, Size:1020Kb

The Role of Phosphatidylserine in Recognition of Apoptotic Cells by Phagocytes Cell Death and Differentiation (1998) 5, 551 ± 562 1998 Stockton Press All rights reserved 13509047/98 $12.00 http://www.stockton-press.co.uk/cdd Review The role of phosphatidylserine in recognition of apoptotic cells by phagocytes Valerie A. Fadok1,2, Donna L. Bratton1, S. Courtney Frasch1, epithelial cells and vascular smooth muscle cells). To date, Mary L. Warner1 and Peter M. Henson1 there have been a number of receptors described for macrophages and other cells which bind to apoptotic cells 1 Department of Pediatrics, National Jewish Medical and Research Center, 1400 and mediate their uptake. These include lectin-like receptors Jackson Street, Denver, Colorado 80206 USA (Duvall et al, 1985, Dini et al, 1992; 1995; Hall et al, 1994; 2 corresponding author: tel: 1-303-398-1281 fax: 1-303-398-1381 Morris et al, 1994; Falasca et al, 1996), the vitronectin receptor email: [email protected] avb3 (Savill et al, 1990; Hall et al, 1994; Hughes et al, 1997), CD36 (Savill et al, 1992), an uncharacterized phosphatidyl- Received: 15.10.97; revised: 23.3.98; accepted: 2.4.98 Edited by M. Piacentini serine-recognizing receptor (Fadok et al, 1992a,b, 1993; Pradhan et al, 1997), CD14 (Flora and Gregory 1994; Devitt et al, 1998), and scavenger receptors (Sambrano and Steinberg, Abstract 1995; Fukasawa et al, 1996; Platt et al, 1996; Murao et al, 1997). The ABC1 transporter, also involved in uptake of Exposure of phosphatidylserine on the outer leaflet of the mammalian apoptotic cells, has recently been shown to plasma membrane is a surface change common to many mediate anion transport (Luciani and Chimini, 1996; Becq et apoptotic cells. Normally restricted to the inner leaflet, al, 1997). It is homologous to the ced-7 gene associated with phosphatidylserine appears as a result of decreased phagocytosis of apoptotic bodies in C. elegans (Ellis et al, aminophospholipid translocase activity and activation of a 1991). How any of these receptors mediate phagocytosis of calcium-dependent scramblase. Phosphatidylserine expo- apoptotic cells is not known. In addition, the ligands for these sure has several potential biological consequences, one of receptors are not well characterized; however, exposure of which is recognition and removal of the apoptotic cell by phosphatidylserine on the external leaflet of the plasma cell membrane appears to be common to many apoptotic cells phagocytes. It is still not clear which receptors mediate PS (Fadok et al, 1992a,b; Schlegel et al, 1993; Mower et al, 1994; recognition on apoptotic cells; however, several interesting Koopman et al, 1994; Bennet et al, 1995; Homburg et al, 1995; candidates have been proposed. These include the Class B Martin et al, 1995a; Shiratsuchi et al, 1997), and this scavenger and thrombospondin receptor CD36, an oxLDL phospholipid appears to be recognized in a stereospecific receptor (CD68), CD14, annexins, b2 glycoprotein I, gas-6 and fashion by subsets of macrophages (Fadok et al, 1992a,b, a novel activity expressed on macrophages stimulated with 1993; Pradhan et al, 1997), by melanoma cells (Fadok, 1995), digestible particles such as b-glucan. Whether PS is the sole by smooth muscle vascular cells (Bennett et al, 1995), and by ligand recognized by phagocytes or whether it associated with Sertoli cells (Shiratsuchi et al, 1997). other molecules to form a complex ligand remains to be Normally, the phospholipids of the plasma membrane determined. are distributed asymmetrically. Choline-containing lipids, such as phosphatidylcholine (PC) and sphingomyelin, are concentrated on the outer leaflet, whereas the aminopho- Keywords: phosphatidylserine; apoptosis; phagocytosis; recep- spholipids, including phosphatidylethanolamine (PE) and tors; membranes phosphatidylserine (PS), are present in highest abundance on the inner leaflet. Phosphatidylserine, in fact, is restricted Abbreviations: 2-GPI: b2-glycoprotein IBMDM: bone marrow- b exclusively to the inner leaflet in most cells. Loss of derived macrophages; CL: cardiolipin; GPS: glycerophosphoryl- phospholipid asymmetry and exposure of phosphatidylser- serine; HMDM: human monocyte-derived macrophages; PC: ine was first demonstrated for apoptotic lymphocytes phosphatidylcholine; PE: phosphatidylethanolamine; PI: phospha- (Fadok et al, 1992a; Schlegel et al, 1993; Mower et al, tidylinositol; PS: phosphatidylserine; SR: scavenger receptors; 1994); however, these findings have been confirmed for a TCR: T cell receptor; TSP: thrombospondin; UV: ultraviolet light; number of cell types, including neutrophils, tumor cell lines, VnR: vitronectin receptor. smooth muscle vascular cells, spermatogonia, and Jurkat T cells and their cytoplasts (Fadok et al, 1992b; Bennet et al, 1995; Homburg et al, 1995; Martin et al, 1995a, 1996; Recognition and removal by phagocytes is the final common Shiratsuchi et al, 1997). Because exposure of phosphati- event in the lives of many apoptotic cells. Apoptotic cells are dylserine appears to be a universal feature of apoptotic removed prior to their lysis, suggesting that they express cells, it is now used as a marker in flow cytometry assays specific surface changes that signal phagocytes to bind and utilizing fluorochrome-labelled annexin V, which binds to PS engulf them. These phagocytes can be professional (the in a calcium-dependent manner (Vermes et al, 1995; Zhang macrophages) or amateur (including such cells as fibroblasts, et al, 1997). PS recognition on apoptotic cells FA Fadok et al 552 study PS and PC transport during development of Mechanisms for phosphatidylserine apoptosis. They found that prior to the development of exposure in apoptotic cells nuclear condensation, PS translocation to the inner leaflet The mechanisms for PS exposure on the surface of apoptotic was impaired. At the same time, the transport of PC was cells appear complex and will remain an active area of increased. These data showed for the first time that during investigation for some time. To determine these, an under- apoptosis, aminophospholipid translocase activity was standing of the maintenance of normal membrane phospho- impaired as the scramblase was activated. The net result lipid asymmetry is required. Two mechanisms have been was PS exposure on the surface of the cell. proposed. A membrane protein termed the aminophospholi- We have recently compared the roles of the aminophos- pid translocase transfers PS and to some extent, PE, from the pholipid translocase and scramblase in three additional cell outer leaflet to the inner leaflet (Devaux, 1991; Zachowski, types known to express PS when undergoing apoptosis: 1993; Williamson and Schlegel, 1994). This protein appears ultraviolet light (UV)-treated HL-60 cells, anti-Fas treated to be a Mg2+-ATPase which is inhibited by Ca2+ at Jurkat T cells, and UV-treated human peripheral blood concentrations achieved in many apoptotic cells (Daleke neutrophils (Bratton et al, 1997). Utilizing NBD-PS uptake and Huestis, 1985; Zachowski et al, 1986; Bitbol et al, 1987; as a measure of aminophospholipid translocase activity in Bevers et al, 1989; Morrot et al, 1990; Comfurius et al, 1990; both bulk uptake assays and flow cytometric assays, we Auland et al, 1994). Tang and coworkers recently cloned a found that translocase activity was impaired in all three cell novel P-type ATPase with aminophospholipid translocase types. The increase in NBD-PC uptake by all three cell activity (Tang et al, 1996). The second mechanism involves types supported the notion that scramblase was activated. the tethering of PS in the inner leaflet by its association with Changes in these activities preceded the expression of PS, membrane skeletal proteins such as fodrin (non-erythrocyte as determined by annexin V binding. Because both the spectrin), based on the known ability of PS to bind to spectrin aminophospholipid translocase activity and the scramblase (Mombers et al, 1980; Williamson et al, 1987; Maksymiw et al, are reported to be affected by alterations in calcium levels, 1987; Middlekoop et al, 1988). The tethering mechanism fell we studied the effects of Ca2+ depletion on PS exposure. out of favor for a period of time (see Calvez et al, 1988; Chelation of intracellular Ca2+ with BAPTA had no effect on Devaux, 1991; Williamson and Schlegel, 1994); for example, PS expression, loss of aminophospholipid translocase Pradhan and coworkers labelled cytoskeletal proteins with a activity, or activation of nonspecific phospholipid flip-flop. photoactivable analogue of phosphatidylethanolamine (2-(2- In contrast, depletion of extracellular Ca2+ was associated azido-4-nitrobenzoyl)-1-acyl-sn-glycero-3-phospho with a marked decrease in annexin V binding (the annexin [14C]ethanolamine) and found no differences in spectrin assay however was done in the presence of Ca2+, as labelling between normal red cells and PS-expressing red annexin binding is calcium-dependent) and loss of cells from patients with sickle cell anemia (Pradhan et al, nonspecific phospholipid transport by apoptotic cells. 1991). However, the tethering hypothesis appears to be There was no alteration in the percentage of apoptotic enjoying a resurgence of interest, given the observation that cells nor was there restoration of aminophospholipid fodrin is cleaved during apoptosis. Other potential intracellular translocase activity, suggesting that loss of aminophos- tethering molecules for phosphatidylserine could include pholipid translocase activity was not sufficient for PS annexins or polyamines (Chung et al, 1985; Meers et al, expression on apoptotic
Recommended publications
  • Phosphatidylserine
    Cognitive Vitality Reports® are reports written by neuroscientists at the Alzheimer’s Drug Discovery Foundation (ADDF). These scientific reports include analysis of drugs, drugs-in- development, drug targets, supplements, nutraceuticals, food/drink, non-pharmacologic interventions, and risk factors. Neuroscientists evaluate the potential benefit (or harm) for brain health, as well as for age-related health concerns that can affect brain health (e.g., cardiovascular diseases, cancers, diabetes/metabolic syndrome). In addition, these reports include evaluation of safety data, from clinical trials if available, and from preclinical models. Phosphatidylserine Evidence Summary May promote cognitive function and protect from decline, especially for DHA-enriched phosphatidylserine. It has a good safety profile but has limited bioavailability. Neuroprotective Benefit: Mixed evidence from clinical trials, and considerable bias in results reporting. Has poor bioavailability and it’s unclear how well it gets into the brain. Aging and related health concerns: No clear rationale or data. One study reported a minor increase in mobility in elderly, but effect can’t be clearly tied to phosphatidylserine. Safety: Well-tolerated with no serious adverse events reported in short trials. May slightly reduce blood pressure. Information on long-term safety is not available. 1 What are they? Phosphatidylserine (PS) is a class of phospholipids that help to make up the plasma membranes in the brain. Varying the levels and the symmetry of PS in cell membranes (i.e. on the inside or outside of a membrane) can affect signaling pathways that are central for cell survival (e.g. Akt, protein kinase C, and Raf-1) and neuronal synaptic communication [1].
    [Show full text]
  • Constitutive Phospholipid Scramblase Activity of a G Protein-Coupled Receptor
    ARTICLE Received 19 Feb 2014 | Accepted 1 Sep 2014 | Published 8 Oct 2014 DOI: 10.1038/ncomms6115 Constitutive phospholipid scramblase activity of a G protein-coupled receptor Michael A. Goren1, Takefumi Morizumi2, Indu Menon1, Jeremiah S. Joseph3,w, Jeremy S. Dittman1, Vadim Cherezov3, Raymond C. Stevens3, Oliver P. Ernst2,4 & Anant K. Menon1 Opsin, the rhodopsin apoprotein, was recently shown to be an ATP-independent flippase (or scramblase) that equilibrates phospholipids across photoreceptor disc membranes in mammalian retina, a process required for disc homoeostasis. Here we show that scrambling is a constitutive activity of rhodopsin, distinct from its light-sensing function. Upon reconstitution into vesicles, discrete conformational states of the protein (rhodopsin, a metarhodopsin II-mimic, and two forms of opsin) facilitated rapid (410,000 phospholipids per protein per second) scrambling of phospholipid probes. Our results indicate that the large conformational changes involved in converting rhodopsin to metarhodopsin II are not required for scrambling, and that the lipid translocation pathway either lies near the protein surface or involves membrane packing defects in the vicinity of the protein. In addition, we demonstrate that b2-adrenergic and adenosine A2A receptors scramble lipids, suggesting that rhodopsin-like G protein-coupled receptors may play an unexpected moonlighting role in re-modelling cell membranes. 1 Department of Biochemistry, Weill Cornell Medical College, New York, New York 10065, USA. 2 Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M5S 1A8. 3 Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California 92037, USA. 4 Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada M5S 1A8.
    [Show full text]
  • Suramin Alters Phosphoinositide Synthesis and Inhibits Growth Factor Receptor Binding in HT-29 Cells'
    (CANCER RESEARCH 50. 6490-6496. October 15. 1990] Suramin Alters Phosphoinositide Synthesis and Inhibits Growth Factor Receptor Binding in HT-29 Cells' Reinhard Kopp2 and Andreas Pfeiffer Departments of Surgery and Internal Medicine II, Klinikum (irosshadern. University of Munich, West Germany ABSTRACT levels and a stimulation of calcium/calmodulin kinases. Di acylglycerol activates protein kinase C, a family of Ca2+-sensi- Initiation of cell growth frequently involves activation of growth factor tive and phospholipid-dependent isoenzymes, known to phos- receptor-coupled u rosine kinases and stimulation of the phosphoinositide phorylate regulatory proteins and to elevate cytosolic pH levels second messenger system. The antitrypanosomal and antifiliarial drug suramin has been shown to exert antiproliferative activities by inhibition (5, 6). Activation of protein kinase C by phorbol esters and of growth factor receptor binding. We therefore investigated the effect of elevation of intracellular calcium levels by calcium ionophores suramin on epidermal growth factor receptor-binding characteristics and, have been shown to be mitogenically active cofactors during the additionally, searched for effects on basal or cholinergically stimulated initiation of DNA synthesis (7-10). phospholipid metabolism in HT-29 cells. HT-29 colon carcinoma cells have recently been shown to Suramin caused a dose-dependent and noncompetitive inhibition of produce EGF/transforming growth factor «and insulin-like '"I-epidermal growth factor binding (concentration producing 50% inhi growth factor 1-like activities (11), indicating a possible auto bition, 44.2 Mg/ml)but did not alter muscarinic receptor binding. Suramin did not affect the basal '-'I* incorporation into phosphoinositides at crine proliferative effect of these growth factors.
    [Show full text]
  • Phospholipid Ebb and Flow Makes Mitochondria Go
    REVIEW Phospholipid ebb and flow makes mitochondria go Michelle Grace Acoba, Nanami Senoo, and Steven M. Claypool Mitochondria, so much more than just being energy factories, also have the capacity to synthesize macromolecules including phospholipids, particularly cardiolipin (CL) and phosphatidylethanolamine (PE). Phospholipids are vital constituents of mitochondrial membranes, impacting the plethora of functions performed by this organelle. Hence, the orchestrated movement of phospholipids to and from the mitochondrion is essential for cellular integrity. In this review, we capture recent advances in the field of mitochondrial phospholipid biosynthesis and trafficking, highlighting the significance of interorganellar communication, intramitochondrial contact sites, and lipid transfer proteins in maintaining membrane homeostasis. We then discuss the physiological functions of CL and PE, specifically how they associate with protein complexes in mitochondrial membranes to support bioenergetics and maintain mitochondrial architecture. Introduction (PS), phosphatidylinositol (PI), and phosphatidylcholine (PC), as Biological membranes give a means of regulated communi- well as sphingolipids, cholesterol, and many lysophospholipids, it cation, as the lipid bilayer itself acts as a platform for many has to recruit from other organelles. This section will focus on the reactions. The amphipathic nature of lipids underlies the mitochondrion’s contribution to the generation of two highly creation of a bilayer; the hydrophobic acyl chains cluster at abundant phospholipids in its membranes: CL and PE (Fig. 1). the middle to get buried, while the hydrophilic head groups face the aqueous surroundings. A diverse array of lipids, in- CL metabolism cluding glycerophospholipids, sphingolipids, and sterols, present CL production. CL is the defining membrane constituent of in different amounts, gives a biological membrane its identity the mitochondrion, the organelle in which it is made (Fig.
    [Show full text]
  • Phosphatidylserine in Non-Apoptotic Cell Death Inbar Shlomovitz1, Mary Speir2,3 and Motti Gerlic1*
    Shlomovitz et al. Cell Communication and Signaling (2019) 17:139 https://doi.org/10.1186/s12964-019-0437-0 REVIEW Open Access Flipping the dogma – phosphatidylserine in non-apoptotic cell death Inbar Shlomovitz1, Mary Speir2,3 and Motti Gerlic1* Abstract The exposure of phosphatidylserine (PS) on the outer plasma membrane has long been considered a unique feature of apoptotic cells. Together with other “eat me” signals, it enables the recognition and phagocytosis of dying cells (efferocytosis), helping to explain the immunologically-silent nature of apoptosis. Recently, however, PS exposure has also been reported in non-apoptotic forms of regulated inflammatory cell death, such as necroptosis, challenging previous dogma. In this review, we outline the evidence for PS exposure in non-apoptotic cells and extracellular vesicles (EVs), and discuss possible mechanisms based on our knowledge of apoptotic-PS exposure. In addition, we examine the outcomes of non-apoptotic PS exposure, including the reversibility of cell death, efferocytosis, and consequent inflammation. By examining PS biology, we challenge the established approach of distinguishing apoptosis from other cell death pathways by AnnexinV staining of PS externalization. Finally, we re- evaluate how PS exposure is thought to define apoptosis as an immunologically silent process distinct from other non-apoptotic and inflammatory cell death pathways. Ultimately, we suggest that a complete understanding of how regulated cell death processes affect the immune system is far from being fully
    [Show full text]
  • Phosphatidylserine, a Death Knell
    Cell Death and Differentiation (2001) 8, 551 ± 563 ã 2001 Nature Publishing Group All rights reserved 1350-9047/01 $15.00 www.nature.com/cdd REVIEW Phosphatidylserine, a death knell# RA Schlegel*,1 and P Williamson2 molecules are sometimes withdrawn from the matrix and hydrolyzed to produce signaling molecules, including 1 Department of Biochemistry and Molecular Biology, Penn State University, prostaglandins, diacylglycerol and ceramides. In recent University Park, PA 16802, USA years, however, a growing body of evidence has suggested 2 Department of Biology, Amherst College, Amherst, MA 01002, USA that physical and chemical properties of the bilayer itself, such * Corresponding author: RA Schlegel, Department of Biochemistry and as the thickness of the hydrophobic core1 or local lateral Molecular Biology, 428 South Frear Laboratory, Penn State University, 2±4 University Park, PA 16802, USA. Tel: (814) 865-6974; Fax: (814) 863-7024; domains of specialized lipid composition may play E-mail: [email protected] significant roles in the assembly and organization of cellular membranes. In addition to these structural contributions to Received 30.8.00; revised 13.11.00; accepted 27.11.00 membrane function, the past few years have also seen the Edited by M Piacentini revelation that a phospholipid itself, and not a derived product, acts on the extracytosolic, external face of the plasma membrane to regulate intercellular interactions. Abstract Appreciation of this new role for phospholipids was Virtually every cell in the body restricts phosphatidylserine galvanized by the demonstration that phosphatidylserine (PS) to the inner leaflet of the plasma membrane by energy- (PS) appears on the surface of apoptotic lymphocytes and dependent transport from the outer to the inner leaflet of the contributes to their phagocytosis by activated macro- phages.5 The functional importance of the phagocytosis of bilayer.
    [Show full text]
  • Enzyme Phosphatidylserine Synthase (Saccharomyces Cerevisae/Chol Gene/Transformation) V
    Proc. Nati. Acad. Sci. USA Vol. 80, pp. 7279-7283, December 1983 Genetics Isolation of the yeast structural gene for the membrane-associated enzyme phosphatidylserine synthase (Saccharomyces cerevisae/CHOl gene/transformation) V. A. LETTS*, L. S. KLIG*, M. BAE-LEEt, G. M. CARMANt, AND S. A. HENRY* *Departments of Genetics and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461; and tDepartment of Food Science, Cook College, New Jersey Agricultural Experimental Station, Rutgers University, New Brunswick, NJ 08903 Communicated by Frank Lilly, August 11, 1983 ABSTRACT The structural gene (CHOI) for phosphatidyl- Mammals, for example, synthesize PtdSer by an exchange re- serine synthase (CDPdiacylglycerol:L-serine O-phosphatidyl- action with PtdEtn (9). However, PtdSer synthase is found in transferase, EC 2.7.8.8) was isolated by genetic complementation E. coli and indeed the structural gene for the E. coli enzyme has in Saccharomyces cerevmae from a bank of yeast genomic DNA been cloned (10). Thus, cloning of the structural gene for the on a chimeric plasmid. The cloned DNA (4.0 kilobases long) was yeast enzyme will permit a detailed comparison of the structure shown to represent a unique sequence in the yeast genome. The and function of prokaryotic and eukaryotic genes and gene DNA sequence on an integrative plasmid was shown to recombine products. The availability of a clone of the CHOI gene will per- into the CHOi locus, confwrming its genetic identity. The chol yeast mit analysis of its regulation at the transcriptional level. Fur- strain transformed with this gene on an autonomously replicating thermore, the cloning of the CHOI gene provides us with the plasmid had significantly increased activity of the regulated mem- the levels of PtdSer synthase in the cell, brane-associated enzyme phosphatidylserine synthase.
    [Show full text]
  • Exploring the Plasmatic Platelet-Activating Factor Acetylhydrolase Activity in Patients with Anti-Phospholipid Antibodies
    Autoimmun Highlights (2017) 8:5 https://doi.org/10.1007/s13317-017-0092-7 ORIGINAL ARTICLE Exploring the plasmatic platelet-activating factor acetylhydrolase activity in patients with anti-phospholipid antibodies 1,2 1 1 2 Martina Fabris • Adriana Cifu` • Cinzia Pistis • Massimo Siega-Ducaton • 1 1,2 3 1,2 Desre` Ethel Fontana • Roberta Giacomello • Elio Tonutti • Francesco Curcio Received: 23 December 2016 / Accepted: 12 March 2017 / Published online: 25 March 2017 Ó The Author(s) 2017. This article is an open access publication Abstract Conclusions PAF-AH plasmatic activity is particularly up- Purpose To explore the role of plasmatic platelet-activat- regulated in LAC? and in ab2GPI IgG? patients, possibly ing factor acetylhydrolase (PAF-AH), a marker of cardio- representing an alternative prognostic biomarker for the vascular risk, in patients with anti-phospholipid antibodies therapeutic management of APS patients. (aPL). Methods PAF-AH activity was assessed in a series of 167 Keywords Platelet-activating factor acetylhydrolase Á unselected patients screened for aPL in a context of Anti-phospholipid syndrome Á Anti-beta2-glycoprotein I thrombotic events, risk of thrombosis or obstetric compli- antibodies Á Anti-prothrombin/phosphatidylserine cations and in 77 blood donors. antibodies Á Lupus anticoagulant Á Atherosclerosis Results 116/167 patients showed positive results for at least one aPL among IgG/IgM anti-prothrombin/phos- phatidylserine (aPS/PT), anti-cardiolipin (aCL), anti-beta2- Introduction glycoprotein I (ab2GPI) or lupus anticoagulant (LAC), while 51/167 patients resulted aPL-negative. LAC? Anti-phospholipid syndrome (APS) is a hypercoagulable patients disclosed higher PAF-AH than LAC-negative disorder clinically displayed by venous or arterial throm- (22.1 ± 6.4 nmol/min/ml vs.
    [Show full text]
  • Inositol Triphosphate-Triggered Calcium Release Blocks Lipid Exchange at Endoplasmic Reticulum- Golgi Contact Sites
    ARTICLE https://doi.org/10.1038/s41467-021-22882-x OPEN Inositol triphosphate-triggered calcium release blocks lipid exchange at endoplasmic reticulum- Golgi contact sites Mouhannad Malek 1, Anna M. Wawrzyniak 1, Peter Koch1, Christian Lüchtenborg2, Manuel Hessenberger1, ✉ Timo Sachsenheimer2, Wonyul Jang 1, Britta Brügger 2 & Volker Haucke 1,3 fi 1234567890():,; Vesicular traf c and membrane contact sites between organelles enable the exchange of proteins, lipids, and metabolites. Recruitment of tethers to contact sites between the endo- plasmic reticulum (ER) and the plasma membrane is often triggered by calcium. Here we reveal a function for calcium in the repression of cholesterol export at membrane contact sites between the ER and the Golgi complex. We show that calcium efflux from ER stores induced by inositol-triphosphate [IP3] accumulation upon loss of the inositol 5-phosphatase INPP5A or receptor signaling triggers depletion of cholesterol and associated Gb3 from the cell surface, resulting in a blockade of clathrin-independent endocytosis (CIE) of Shiga toxin. This phenotype is caused by the calcium-induced dissociation of oxysterol binding protein (OSBP) from the Golgi complex and from VAP-containing membrane contact sites. Our findings reveal a crucial function for INPP5A-mediated IP3 hydrolysis in the control of lipid exchange at membrane contact sites. 1 Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Berlin, Germany. 2 Heidelberg University Biochemistry Center (BZH), Heidelberg ✉ University, Heidelberg, Germany. 3 Faculty of Biology, Chemistry and Pharmacy, Freie Universität Berlin, Berlin, Germany. email: [email protected] NATURE COMMUNICATIONS | (2021) 12:2673 | https://doi.org/10.1038/s41467-021-22882-x | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-021-22882-x ellular membrane homeostasis and the exchange of Results material between compartments can occur by vesicular INPP5A is required for Gb3-mediated Shiga toxin cell entry.
    [Show full text]
  • Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
    Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase
    [Show full text]
  • Regulation of Signaling and Metabolism by Lipin-Mediated Phosphatidic Acid Phosphohydrolase Activity
    biomolecules Review Regulation of Signaling and Metabolism by Lipin-mediated Phosphatidic Acid Phosphohydrolase Activity Andrew J. Lutkewitte and Brian N. Finck * Center for Human Nutrition, Division of Geriatrics and Nutritional Sciences, Department of Medicine, Washington University School of Medicine, Euclid Avenue, Campus Box 8031, St. Louis, MO 63110, USA; [email protected] * Correspondence: bfi[email protected]; Tel: +1-3143628963 Received: 4 September 2020; Accepted: 24 September 2020; Published: 29 September 2020 Abstract: Phosphatidic acid (PA) is a glycerophospholipid intermediate in the triglyceride synthesis pathway that has incredibly important structural functions as a component of cell membranes and dynamic effects on intracellular and intercellular signaling pathways. Although there are many pathways to synthesize and degrade PA, a family of PA phosphohydrolases (lipin family proteins) that generate diacylglycerol constitute the primary pathway for PA incorporation into triglycerides. Previously, it was believed that the pool of PA used to synthesize triglyceride was distinct, compartmentalized, and did not widely intersect with signaling pathways. However, we now know that modulating the activity of lipin 1 has profound effects on signaling in a variety of cell types. Indeed, in most tissues except adipose tissue, lipin-mediated PA phosphohydrolase activity is far from limiting for normal rates of triglyceride synthesis, but rather impacts critical signaling cascades that control cellular homeostasis. In this review, we will discuss how lipin-mediated control of PA concentrations regulates metabolism and signaling in mammalian organisms. Keywords: phosphatidic acid; diacylglycerol; lipin; signaling 1. Introduction Foundational work many decades ago by the laboratory of Dr. Eugene Kennedy defined the four sequential enzymatic steps by which three fatty acyl groups were esterified onto the glycerol-3-phosphate backbone to synthesize triglyceride [1].
    [Show full text]
  • Transcriptomic and Proteomic Profiling Provides Insight Into
    BASIC RESEARCH www.jasn.org Transcriptomic and Proteomic Profiling Provides Insight into Mesangial Cell Function in IgA Nephropathy † † ‡ Peidi Liu,* Emelie Lassén,* Viji Nair, Celine C. Berthier, Miyuki Suguro, Carina Sihlbom,§ † | † Matthias Kretzler, Christer Betsholtz, ¶ Börje Haraldsson,* Wenjun Ju, Kerstin Ebefors,* and Jenny Nyström* *Department of Physiology, Institute of Neuroscience and Physiology, §Proteomics Core Facility at University of Gothenburg, University of Gothenburg, Gothenburg, Sweden; †Division of Nephrology, Department of Internal Medicine and Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan; ‡Division of Molecular Medicine, Aichi Cancer Center Research Institute, Nagoya, Japan; |Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden; and ¶Integrated Cardio Metabolic Centre, Karolinska Institutet Novum, Huddinge, Sweden ABSTRACT IgA nephropathy (IgAN), the most common GN worldwide, is characterized by circulating galactose-deficient IgA (gd-IgA) that forms immune complexes. The immune complexes are deposited in the glomerular mesangium, leading to inflammation and loss of renal function, but the complete pathophysiology of the disease is not understood. Using an integrated global transcriptomic and proteomic profiling approach, we investigated the role of the mesangium in the onset and progression of IgAN. Global gene expression was investigated by microarray analysis of the glomerular compartment of renal biopsy specimens from patients with IgAN (n=19) and controls (n=22). Using curated glomerular cell type–specific genes from the published literature, we found differential expression of a much higher percentage of mesangial cell–positive standard genes than podocyte-positive standard genes in IgAN. Principal coordinate analysis of expression data revealed clear separation of patient and control samples on the basis of mesangial but not podocyte cell–positive standard genes.
    [Show full text]