Leidy's Comb Jelly
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Microbiota Differences of the Comb Jelly Mnemiopsis Leidyi in Native and Invasive Sub-Populations
bioRxiv preprint doi: https://doi.org/10.1101/601419; this version posted April 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Microbiota differences of the comb jelly Mnemiopsis leidyi in native and invasive sub‐populations Cornelia Jaspers1*, Nancy Weiland‐Bräuer3, Martin Fischer3, Sven Künzel4, Ruth A. Schmitz3 and Thorsten B.H. Reusch1 1GEOMAR Helmholtz Centre for Ocean Research Kiel, Marine Evolutionary Ecology, Kiel, Germany 2Institute for General Microbiology, Christian‐Albrechts‐Universität zu Kiel, Kiel, Germany 3Max Planck Institute for Evolutionary Biology, Plön, Germany *corresponding author: [email protected], +49‐431‐600‐4560, ORCID: 0000‐0003‐2850‐4131 Keywords: Comb jelly, metaorganism, bacteria, species translocations, invasive species 1 bioRxiv preprint doi: https://doi.org/10.1101/601419; this version posted April 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. ABSTRACT The translocation of non‐indigenous species around the world, especially in marine systems, is a matter of concern for biodiversity conservation and ecosystem functioning. While specific traits are often recognized to influence establishment success of non‐indigenous species, the impact of the associated microbial community for the fitness, performance and invasion success of basal marine metazoans remains vastly unknown. In this study we compared the microbiota community composition of the invasive ctenophore Mnemiopsis leidyi in different native and invasive sub‐populations along with characterization of the genetic structure of the host. By 16S rRNA gene amplicon sequencing we showed that the sister group to all metazoans, namely ctenophores, harbored a distinct microbiota on the animal host, which significantly differed across two major tissues, namely epidermis and gastrodermis. -
Zooplankton Species", Takes You Directly to the Species Cards, Which Hypercard Taxonomy Contain the Pictures and Description of Each Species in the Key
Fisken Hav. , 198 9 ( 1) : 1- 13 + App . Creating and Using Taxonomic Keys with HyperCard Kenneth W. Estep Institute of Marine Research, Postbox 1870,5024 Bergen, Norway The preparation and use of taxonomic keys is an essential part of the work of many biologists. However, the difficulty of collecting taxonomic information that is often dispersed in many hard-to-use and difficult-to-find references discourages the common use of taxonomy in the work of many ecologists. This manuscript describes the computer program Linnaeus, which was designed to solve this problem. Linnaeus was developed at the Institute of Marine Research in Bergen using the Macintosh computer and will include much more complicated examples of HyperCard l l programming. l To use the example key, copy the files from the Linnaeus disk to your i i hard-disk drive and click on the file "Read Me First." This file has l mmplete instructions on the installation into your HyperCard Home stack. If you wish, you can print a copy of the instructions by choosing the "Print Instructions" button. b inn is After you have installed Linnaeus, you can move to the program from your HyperCard Home card by clicking on the Linnaeus Linnaeus button on your Home card. 1 This will bring you to the Index card for Linnaeus. About Linnaeus I Use the Zooplankton j i i Set User Hode i Identlffcatlon key.- i ZooplanktonKey i i ......" ......... " ... ......-.... ",.." ......... " ,......,. ",,.,".......*.~.........".........".....*..."............... "..."...."...-....".: i...... " ....................................... " ......... ".... " ......... "................................................... - .... "..." ....".. I i - - i "se the Zooplankton i -- I i Species List Reference~ i ..% ,p species list. , f ZooplanktonSpeoies i i ................." ......... "......... ".... " ........................................................................ ".... -...m .... -...m ....-. -
Ctenophore Relationships and Their Placement As the Sister Group to All Other Animals
ARTICLES DOI: 10.1038/s41559-017-0331-3 Ctenophore relationships and their placement as the sister group to all other animals Nathan V. Whelan 1,2*, Kevin M. Kocot3, Tatiana P. Moroz4, Krishanu Mukherjee4, Peter Williams4, Gustav Paulay5, Leonid L. Moroz 4,6* and Kenneth M. Halanych 1* Ctenophora, comprising approximately 200 described species, is an important lineage for understanding metazoan evolution and is of great ecological and economic importance. Ctenophore diversity includes species with unique colloblasts used for prey capture, smooth and striated muscles, benthic and pelagic lifestyles, and locomotion with ciliated paddles or muscular propul- sion. However, the ancestral states of traits are debated and relationships among many lineages are unresolved. Here, using 27 newly sequenced ctenophore transcriptomes, publicly available data and methods to control systematic error, we establish the placement of Ctenophora as the sister group to all other animals and refine the phylogenetic relationships within ctenophores. Molecular clock analyses suggest modern ctenophore diversity originated approximately 350 million years ago ± 88 million years, conflicting with previous hypotheses, which suggest it originated approximately 65 million years ago. We recover Euplokamis dunlapae—a species with striated muscles—as the sister lineage to other sampled ctenophores. Ancestral state reconstruction shows that the most recent common ancestor of extant ctenophores was pelagic, possessed tentacles, was bio- luminescent and did not have separate sexes. Our results imply at least two transitions from a pelagic to benthic lifestyle within Ctenophora, suggesting that such transitions were more common in animal diversification than previously thought. tenophores, or comb jellies, have successfully colonized from species across most of the known phylogenetic diversity of nearly every marine environment and can be key species in Ctenophora. -
Invasive Species: a Challenge to the Environment, Economy, and Society
Invasive Species: A challenge to the environment, economy, and society 2016 Manitoba Envirothon 2016 MANITOBA ENVIROTHON STUDY GUIDE 2 Acknowledgments The primary author, Manitoba Forestry Association, and Manitoba Envirothon would like to thank all the contributors and editors to the 2016 theme document. Specifically, I would like to thank Robert Gigliotti for all his feedback, editing, and endless support. Thanks to the theme test writing subcommittee, Kyla Maslaniec, Lee Hrenchuk, Amie Peterson, Jennifer Bryson, and Lindsey Andronak, for all their case studies, feedback, editing, and advice. I would like to thank Jacqueline Montieth for her assistance with theme learning objectives and comments on the document. I would like to thank the Ontario Envirothon team (S. Dabrowski, R. Van Zeumeren, J. McFarlane, and J. Shaddock) for the preparation of their document, as it provided a great launch point for the Manitoba and resources on invasive species management. Finally, I would like to thank Barbara Fuller, for all her organization, advice, editing, contributions, and assistance in the preparation of this document. Olwyn Friesen, BSc (hons), MSc PhD Student, University of Otago January 2016 2016 MANITOBA ENVIROTHON STUDY GUIDE 3 Forward to Advisors The 2016 North American Envirothon theme is Invasive Species: A challenge to the environment, economy, and society. Using the key objectives and theme statement provided by the North American Envirothon and the Ontario Envirothon, the Manitoba Envirothon (a core program of Think Trees – Manitoba Forestry Association) developed a set of learning outcomes in the Manitoba context for the theme. This document provides Manitoba Envirothon participants with information on the 2016 theme. -
Crustacea: Amphipoda: Hyperiidea: Hyperiidae), with the Description of a New Genus to Accommodate H
Zootaxa 3905 (2): 151–192 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3905.2.1 http://zoobank.org/urn:lsid:zoobank.org:pub:A47AE95B-99CA-42F0-979F-1CAAD1C3B191 A review of the hyperiidean amphipod genus Hyperoche Bovallius, 1887 (Crustacea: Amphipoda: Hyperiidea: Hyperiidae), with the description of a new genus to accommodate H. shihi Gasca, 2005 WOLFGANG ZEIDLER South Australian Museum, North Terrace, Adelaide, South Australia 5000, Australia. E-mail [email protected] Table of contents Abstract . 151 Introduction . 152 Material and methods . 152 Systematics . 153 Suborder Hyperiidea Milne-Edwards, 1830 . 153 Family Hyperiidae Dana, 1852 . 153 Genus Hyperoche Bovallius, 1887 . 153 Key to the species of Hyperoche Bovallius, 1887 . 154 Hyperoche medusarum (Kröyer, 1838) . 155 Hyperoche martinezii (Müller, 1864) . 161 Hyperoche picta Bovallius, 1889 . 165 Hyperoche luetkenides Walker, 1906 . 168 Hyperoche mediterranea Senna, 1908 . 173 Hyperoche capucinus Barnard, 1930 . 177 Hyperoche macrocephalus sp. nov. 180 Genus Prohyperia gen. nov. 182 Prohyperia shihi (Gasca, 2005) . 183 Acknowledgements . 186 References . 186 Abstract This is the first comprehensive review of the genus Hyperoche since that of Bovallius (1889). This study is based primarily on the extensive collections of the ZMUC but also on more recent collections in other institutions. Seven valid species are recognised in this review, including one described as new to science. Two new characters were discovered; the first two pereonites are partially or wholly fused dorsally and the coxa of pereopod 7 is fused with the pereonite. -
Assessing the Impact of Key Marine Invasive Non-Native Species on Welsh MPA Habitat Features, Fisheries and Aquaculture
Assessing the impact of key Marine Invasive Non-Native Species on Welsh MPA habitat features, fisheries and aquaculture. Tillin, H.M., Kessel, C., Sewell, J., Wood, C.A. Bishop, J.D.D Marine Biological Association of the UK Report No. 454 Date www.naturalresourceswales.gov.uk About Natural Resources Wales Natural Resources Wales’ purpose is to pursue sustainable management of natural resources. This means looking after air, land, water, wildlife, plants and soil to improve Wales’ well-being, and provide a better future for everyone. Evidence at Natural Resources Wales Natural Resources Wales is an evidence based organisation. We seek to ensure that our strategy, decisions, operations and advice to Welsh Government and others are underpinned by sound and quality-assured evidence. We recognise that it is critically important to have a good understanding of our changing environment. We will realise this vision by: Maintaining and developing the technical specialist skills of our staff; Securing our data and information; Having a well resourced proactive programme of evidence work; Continuing to review and add to our evidence to ensure it is fit for the challenges facing us; and Communicating our evidence in an open and transparent way. This Evidence Report series serves as a record of work carried out or commissioned by Natural Resources Wales. It also helps us to share and promote use of our evidence by others and develop future collaborations. However, the views and recommendations presented in this report are not necessarily those of -
Evolution of the TGF-B Signaling Pathway and Its Potential Role in the Ctenophore, Mnemiopsis Leidyi
Evolution of the TGF-b Signaling Pathway and Its Potential Role in the Ctenophore, Mnemiopsis leidyi Kevin Pang1, Joseph F. Ryan2, Andreas D. Baxevanis2, Mark Q. Martindale1* 1 Kewalo Marine Laboratory, Pacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, Hawaii, United States of America, 2 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, United States of America Abstract The TGF-b signaling pathway is a metazoan-specific intercellular signaling pathway known to be important in many developmental and cellular processes in a wide variety of animals. We investigated the complexity and possible functions of this pathway in a member of one of the earliest branching metazoan phyla, the ctenophore Mnemiopsis leidyi. A search of the recently sequenced Mnemiopsis genome revealed an inventory of genes encoding ligands and the rest of the components of the TGF-b superfamily signaling pathway. The Mnemiopsis genome contains nine TGF-b ligands, two TGF-b- like family members, two BMP-like family members, and five gene products that were unable to be classified with certainty. We also identified four TGF-b receptors: three Type I and a single Type II receptor. There are five genes encoding Smad proteins (Smad2, Smad4, Smad6, and two Smad1s). While we have identified many of the other components of this pathway, including Tolloid, SMURF, and Nomo, notably absent are SARA and all of the known antagonists belonging to the Chordin, Follistatin, Noggin, and CAN families. This pathway likely evolved early in metazoan evolution as nearly all components of this pathway have yet to be identified in any non-metazoan. -
Ctenophore Immune Cells Produce Chromatin Traps in Response to Pathogens and NADPH- Independent Stimulus
bioRxiv preprint doi: https://doi.org/10.1101/2020.06.09.141010; this version posted June 12, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: Ctenophore immune cells produce chromatin traps in response to pathogens and NADPH- independent stimulus Authors and Affiliations: Lauren E. Vandepasa,b,c*†, Caroline Stefanic†, Nikki Traylor-Knowlesd, Frederick W. Goetzb, William E. Brownee, Adam Lacy-Hulbertc aNRC Research Associateship Program; bNorthwest Fisheries Science Center, National Oceanographic and Atmospheric Administration, Seattle, WA 98112; cBenaroya Research Institute at Virginia Mason, Seattle, WA 98101; dUniversity of Miami Rosenstiel School of Marine and Atmospheric Sciences, Miami, FL 33149; eUniversity of Miami Department of Biology, Coral Gables, FL 33146; *Corresponding author; †Authors contributed equally Key Words: Ctenophore; ETosis; immune cell evolution Abstract The formation of extracellular DNA traps (ETosis) is a mechanism of first response by specific immune cells following pathogen encounters. Historically a defining behavior of vertebrate neutrophils, cells capable of ETosis were recently discovered in several invertebrate taxa. Using pathogen and drug stimuli, we report that ctenophores – thought to represent the earliest- diverging animal lineage – possess cell types capable of ETosis, suggesting that this cellular immune response behavior likely evolved early in the metazoan stem lineage. Introduction Immune cells deploy diverse behaviors during pathogen elimination, including phagocytosis, secretion of inflammatory cytokines, and expulsion of nuclear material by casting extracellular DNA “traps” termed ETosis. Specific immune cell types have not been identified in early diverging non-bilaterian phyla and thus conservation of cellular immune behaviors across Metazoa remains unclear. -
An Invitation to Monitor Georgia's Coastal Wetlands
An Invitation to Monitor Georgia’s Coastal Wetlands www.shellfish.uga.edu By Mary Sweeney-Reeves, Dr. Alan Power, & Ellie Covington First Printing 2003, Second Printing 2006, Copyright University of Georgia “This book was prepared by Mary Sweeney-Reeves, Dr. Alan Power, and Ellie Covington under an award from the Office of Ocean and Coastal Resource Management, National Oceanic and Atmospheric Administration. The statements, findings, conclusions, and recommendations are those of the authors and do not necessarily reflect the views of OCRM and NOAA.” 2 Acknowledgements Funding for the development of the Coastal Georgia Adopt-A-Wetland Program was provided by a NOAA Coastal Incentive Grant, awarded under the Georgia Department of Natural Resources Coastal Zone Management Program (UGA Grant # 27 31 RE 337130). The Coastal Georgia Adopt-A-Wetland Program owes much of its success to the support, experience, and contributions of the following individuals: Dr. Randal Walker, Marie Scoggins, Dodie Thompson, Edith Schmidt, John Crawford, Dr. Mare Timmons, Marcy Mitchell, Pete Schlein, Sue Finkle, Jenny Makosky, Natasha Wampler, Molly Russell, Rebecca Green, and Jeanette Henderson (University of Georgia Marine Extension Service); Courtney Power (Chatham County Savannah Metropolitan Planning Commission); Dr. Joe Richardson (Savannah State University); Dr. Chandra Franklin (Savannah State University); Dr. Dionne Hoskins (NOAA); Dr. Charles Belin (Armstrong Atlantic University); Dr. Merryl Alber (University of Georgia); (Dr. Mac Rawson (Georgia Sea Grant College Program); Harold Harbert, Kim Morris-Zarneke, and Michele Droszcz (Georgia Adopt-A-Stream); Dorset Hurley and Aimee Gaddis (Sapelo Island National Estuarine Research Reserve); Dr. Charra Sweeney-Reeves (All About Pets); Captain Judy Helmey (Miss Judy Charters); Jan Mackinnon and Jill Huntington (Georgia Department of Natural Resources). -
Midwater Data Sheet
MIDWATER TRAWL DATA SHEET RESEARCH VESSEL__________________________________(1/20/2013Version*) CLASS__________________;DATE_____________;NAME:_________________________; DEVICE DETAILS___________ LOCATION (OVERBOARD): LAT_______________________; LONG___________________________ LOCATION (AT DEPTH): LAT_______________________; LONG______________________________ LOCATION (START UP): LAT_______________________; LONG______________________________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ BOTTOM DEPTH_________; DEPTH OF SAMPLE:____________; DURATION OF TRAWL___________; TIME: IN_________AT DEPTH________START UP__________SURFACE_________ SHIP SPEED__________; WEATHER__________________; SEA STATE_________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_____________________________ INVERTEBRATES Lensia hostile_______________________ PHYLUM RADIOLARIA Lensia havock______________________ Family Tuscaroridae “Round yellow ones”___ Family Hippopodiidae Vogtia sp.___________________________ PHYLUM CTENOPHORA Family Prayidae Subfamily Nectopyramidinae Class Nuda "Pointed siphonophores"________________ Order Beroida Nectadamas sp._______________________ Family Beroidae Nectopyramis sp.______________________ Beroe abyssicola_____________________ Family Prayidae Beroe forskalii________________________ Subfamily Prayinae Beroe cucumis _______________________ Craseoa lathetica_____________________ Class Tentaculata Desmophyes annectens_________________ Subclass -
Universidade Estadual Paulista Mapeamento De
UNIVERSIDADE ESTADUAL PAULISTA Instituto de Geociências e Ciências Exatas Campus de Rio Claro MAPEAMENTO DE SENSIBILIDADE AO DERRAME DE ÓLEO DOS AMBIENTES COSTEIROS DOS MUNICÍPIOS DE SÃO VICENTE, SANTOS E GUARUJÁ – SP Volume I RAFAEL RIANI COSTA PERINOTTO Orientadora: Profa. Dra. Paulina Setti Riedel Co-orientador: Dr. João Carlos Carvalho Milanelli RIO CLARO (SP) 2010 UNIVERSIDADE ESTADUAL PAULISTA Instituto de Geociências e Ciências Exatas Campus de Rio Claro MAPEAMENTO DE SENSIBILIDADE AO DERRAME DE ÓLEO DOS AMBIENTES COSTEIROS DOS MUNICÍPIOS DE SÃO VICENTE, SANTOS E GUARUJÁ – SP Volume I RAFAEL RIANI COSTA PERINOTTO Orientadora: Profa. Dra. Paulina Setti Riedel Co-orientador: Dr. João Carlos Carvalho Milanelli Dissertação de Mestrado elaborada junto ao Programa de Pós-Graduação em Geociências e Meio Ambiente para obtenção do título de Mestre em Geociências e Meio Ambiente RIO CLARO (SP) 2010 Comissão Examinadora ________________________________ Profa. Dra. Paulina Setti Riedel ________________________________ Dra. Íris Regina Fernandes Poffo ________________________________ Prof. Dr. Gilberto José Garcia ________________________________ Rafael Riani Costa Perinotto _______________________________________________ Aluno Rio Claro, 03 de agosto de 2010 Resultado: APROVADO AGRADECIMENTOS Agradeço, A todos que direta ou indiretamente contribuíram para a execução deste projeto. À FAPESP (Fundação de Amparo à Pesquisa do Estado de São Paulo) pela Bolsa de Mestrado e pela Reserva Técnica concedidas. À CAPES (Coordenação de Aperfeiçoamento de Pessoal de Nível Superior) pelos primeiros 6 meses de bolsa no início do Mestrado. Em nome da Rosângela, agradeço ao Programa de Pós-Graduação em Geociências e Meio Ambiente e a todos os colegas, professores e amigos. À Profa. Dra. Paulina Setti Riedel (orientadora) e ao Dr. -
Articles and Plankton
Ocean Sci., 15, 1327–1340, 2019 https://doi.org/10.5194/os-15-1327-2019 © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License. The Pelagic In situ Observation System (PELAGIOS) to reveal biodiversity, behavior, and ecology of elusive oceanic fauna Henk-Jan Hoving1, Svenja Christiansen2, Eduard Fabrizius1, Helena Hauss1, Rainer Kiko1, Peter Linke1, Philipp Neitzel1, Uwe Piatkowski1, and Arne Körtzinger1,3 1GEOMAR, Helmholtz Centre for Ocean Research Kiel, Düsternbrooker Weg 20, 24105 Kiel, Germany 2University of Oslo, Blindernveien 31, 0371 Oslo, Norway 3Christian Albrecht University Kiel, Christian-Albrechts-Platz 4, 24118 Kiel, Germany Correspondence: Henk-Jan Hoving ([email protected]) Received: 16 November 2018 – Discussion started: 10 December 2018 Revised: 11 June 2019 – Accepted: 17 June 2019 – Published: 7 October 2019 Abstract. There is a need for cost-efficient tools to explore 1 Introduction deep-ocean ecosystems to collect baseline biological obser- vations on pelagic fauna (zooplankton and nekton) and es- The open-ocean pelagic zones include the largest, yet least tablish the vertical ecological zonation in the deep sea. The explored habitats on the planet (Robison, 2004; Webb et Pelagic In situ Observation System (PELAGIOS) is a 3000 m al., 2010; Ramirez-Llodra et al., 2010). Since the first rated slowly (0.5 m s−1) towed camera system with LED il- oceanographic expeditions, oceanic communities of macro- lumination, an integrated oceanographic sensor set (CTD- zooplankton and micronekton have been sampled using nets O2) and telemetry allowing for online data acquisition and (Wiebe and Benfield, 2003). Such sampling has revealed a video inspection (low definition).