HELLENIC BIOINFORMATICS 10 HELLENIC
BIOINFORMATICS 10 SEPTEMBER 6‐9, 2017 – HERAKLION, CRETE, GREECE
Bioinformatics and its applications in Health, Biodiversity and the Environment
about Elixir • biodiversity • bioinformatics • bioprospecting • computational biology • enzyme discovery • genomics • metabolic engineering • microbiome • pharmacogenomics • phylogeny • structural genomics • synthetic biology • systems biology • text mining • functional proteomics
Abstract submission deadline: June 10, 2017 https://easychair.org/conferences/?conf=hbioinfo2017
Registration deadline: June 15th, 2017 Home Page: http://hbio.info/ https://www.regonline.com/hbioinfo10
HELLENIC BIOINFORMATICS 10 [SEPTEMBER 6-9, 2017 – HERAKLION, CRETE, GREECE]
Organizing Committee September 5: WORKSHOPS September 6: TUTORIALS
Michalis Aivaliotis, Greece (co-chair) Proteomics Workshop – Hands-on Session 1: Metagenomics Sophia Ananiadou, UK Pantelis Angelidis, Greece Michalis Aivaliotis ● Alex Mitchell, UK Eleftherios Angelis, Greece o Introduction to proteomics Title: Introduction to EBI Metagenomics
Christos Arvanitidis, Greece M. Aivaliotis, N. Kountourakis, K. ● Folker Meyer, USA Theodora Farmaki, Greece Psatha, C. Seitanidou Title: MG-RAST version 4.0 Ioannis Iliopoulos, Greece (chair) o Bioinformatics I – MS-Raw data Dimitris Kafetzopoulos, Greece processing Session 2: Phylogenomics
Ilias Kappas, Greece M. Aivaliotis, N. Kountourakis, K. Christos Karapiperis, Greece ● Alexandros Stamatakis, Germany Psatha, C. Seitanidou Title: Phylogenomic inference methods: George Kotoulas, Greece o Bioinformatics II – Meta-data analysis inferring,species trees from whole- Yiannis Kourmpetis, Switzerland and visualization genome alignments Nikos Kyrpides, USA Advanced RNA-Seq and ChIP-Seq data ● Bastien Bousseau, France Tereza Manousaki, Greece analysis – Hands-on Title: Reconciliation methods: interpreting Pericles Mitkas, Greece gene trees ,given species trees Christos Ouzounis, Greece Pantelis Topalis
Evangelos Pafilis, Greece o Introduction to RNA-Seq and ChIP-Seq Session 3: Data Integrity
Pavlos Pavlidis, Greece Anastasia Politou, Greece P. Topalis, E. Dialynas, G. Papagiannakis ● Ioannis Ioannidis, USA Yiota Poirazi, Greece o RNA-Seq Data Analysis Title: Predating data: Integrity of methods George Potamias, Greece P. Topalis, E. Dialynas and statistics Vasilis Promponas, Cyprus o ChIP-Seq Data Analysis ● Gemma Galdon Clavell, Spain Zacharias Scouras, Greece Title: Misconduct and data: privacy, Alexandros Stamatakis, Germany Important Notes: accountability, and responsibility in (big) Nektarios Tavernarakis, Greece Number of maximum participants 35. data science Pantelis Topalis, Greece A digital textbook and references will be provided to all participants in advance. Ioannis Tsamardinos, Greece All the participants need to have their own George Tsiamis, Greece laptops. No computers will be provided by Important Notes: Ioannis Vizirianakis, Greece the organizers. Number of maximum participants 150.
Home Page: http://hbio.info/ Registration: https://www.regonline.com/hbioinfo10
HELLENIC BIOINFORMATICS 10 [SEPTEMBER 6-9, 2017 – HERAKLION, CRETE, GREECE]
September 7: HEALTH September 8: ENVIRONMENT September 9: BIODIVERSITY
Keynote 1 Keynote 3 Keynote 4 ● John Ioannidis, USA ● Peter Karp, USA ● Yves Moreau, Belgium Title: Credibility and utility of big data Title: The Omics Dashboard for Inter- Title: Bayesian matrix factorization with active Exploration of High-Throughput side information and application to drug- Session 1: Medical Genomics Data target activity prediction ● Eleftheria Zeggini, UK Title: Progress in understanding the Session 5: Human Microbiome Session 9: Cellular Networks and Modeling genomic aetiology of osteoarthritis ● Lynn Schriml, USA ● Ewa Szczurek, Poland Title: GSC metadata standards in Title: Statistical and mathematical ● Evangelia Petsalaki, UK action: MetaSUB and ISD models in computational oncology Title: Integrative study of the role of RhoGAP/GEFs in the Rho protein ● Maria Pilar Francino, Spain ● Hector-Garcia Martin, USA signaling network Title: Microbiota development in the gut Title: Mathematical modeling of -omics of infants, children and adolescents data for biofuel production through Session 2: Neuro-Genomics synthetic biology ● Panos Roussos, USA Session 6: Computational Metagenomics Title: Big Data Analysis and Genetic ● Folker Meyer, USA Session 10: PhyloGenomics Liability to Common Neuropsychiatric Title: A novel pipeline for high quality ● David Ussery, USA Traits amplicon analysis integrated into MG- Title: What is Life? Conserved RAST Functional Domains in a Hundred Session 3: Variomics Thousand Bacterial Genomes ● Mehmet Sommel, Turkey ● Rob Finn, UK Title: The spread of farming in the Title: Expanding the scope and repro- ● Daniel Lundin, Sweden Aegean 9000 years ago: An ancient ducibility of analysis in EBI metageno- Title: The evolution of ribonucleotide DNA perspective mics reduction
● Stefan Laurent, Switzerland Session 7: Environmental Microbiome Session 11: Text Mining & Ontologies Title: Studying the adaptive and demo- ● Daniele Daffonchio, Saudi Arabia ● Lars Jensen, Denmark graphic histories of natural populations Title: Soil development and rhizosphere Title: One tagger, many uses: Simple using population genetics text-mining strategies for biomedicine effect in a High Arctic desert chronose- quence Keynote 5 Session 4: Roundtable: Role of Greek ● Periklis Papadopoulos, USA Bioinformatics in Elixir ● Carolin Frank, USA Title: Space Technology and Space Title: Nitrogen fixation by the foliar Keynote 2 Biology conifer microbiome ● Alfonso Valencia, Spain HBioinfo-2018 Handoff, Closing Remarks Title: (TBA) Session 8: HB Society Matters and Awards
Home Page: http://hbio.info/ Registration: https://www.regonline.com/hbioinfo10