Olfactory Optogenetics: Light Illuminates the Chemical Sensing Mechanisms of Biological Olfactory Systems
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Neural Dust: Ultrasonic Biological Interface
Neural Dust: Ultrasonic Biological Interface Dongjin (DJ) Seo Electrical Engineering and Computer Sciences University of California at Berkeley Technical Report No. UCB/EECS-2018-146 http://www2.eecs.berkeley.edu/Pubs/TechRpts/2018/EECS-2018-146.html December 1, 2018 Copyright © 2018, by the author(s). All rights reserved. Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. To copy otherwise, to republish, to post on servers or to redistribute to lists, requires prior specific permission. Neural Dust: Ultrasonic Biological Interface by Dongjin Seo A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Engineering - Electrical Engineering and Computer Sciences in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Michel M. Maharbiz, Chair Professor Elad Alon Professor John Ngai Fall 2016 Neural Dust: Ultrasonic Biological Interface Copyright 2016 by Dongjin Seo 1 Abstract Neural Dust: Ultrasonic Biological Interface by Dongjin Seo Doctor of Philosophy in Engineering - Electrical Engineering and Computer Sciences University of California, Berkeley Professor Michel M. Maharbiz, Chair A seamless, high density, chronic interface to the nervous system is essential to enable clinically relevant applications such as electroceuticals or brain-machine interfaces (BMI). Currently, a major hurdle in neurotechnology is the lack of an implantable neural interface system that remains viable for a patient's lifetime due to the development of biological response near the implant. -
Perceiving Invisible Light Through a Somatosensory Cortical Prosthesis
ARTICLE Received 24 Aug 2012 | Accepted 15 Jan 2013 | Published 12 Feb 2013 DOI: 10.1038/ncomms2497 Perceiving invisible light through a somatosensory cortical prosthesis Eric E. Thomson1,2, Rafael Carra1,w & Miguel A.L. Nicolelis1,2,3,4,5 Sensory neuroprostheses show great potential for alleviating major sensory deficits. It is not known, however, whether such devices can augment the subject’s normal perceptual range. Here we show that adult rats can learn to perceive otherwise invisible infrared light through a neuroprosthesis that couples the output of a head-mounted infrared sensor to their soma- tosensory cortex (S1) via intracortical microstimulation. Rats readily learn to use this new information source, and generate active exploratory strategies to discriminate among infrared signals in their environment. S1 neurons in these infrared-perceiving rats respond to both whisker deflection and intracortical microstimulation, suggesting that the infrared repre- sentation does not displace the original tactile representation. Hence, sensory cortical prostheses, in addition to restoring normal neurological functions, may serve to expand natural perceptual capabilities in mammals. 1 Department of Neurobiology, Duke University, Box 3209, 311 Research Drive, Bryan Research, Durham, North Carolina 27710, USA. 2 Edmond and Lily Safra International Institute for Neuroscience of Natal (ELS-IINN), Natal 01257050, Brazil. 3 Department of Biomedical Engineering, Duke University, Durham, North Carolina 27710, USA. 4 Department of Psychology and Neuroscience, Duke University, Durham, North Carolina 27710, USA. 5 Center for Neuroengineering, Duke University, Durham, North Carolina 27710, USA. w Present address: University of Sao Paulo School of Medicine, Sao Paulo 01246-000, Brazil. Correspondence and requests for materials should be addressed to M.A.L.N. -
Activation of the Dopaminergic Pathway from VTA to the Medial
RESEARCH ARTICLE Activation of the dopaminergic pathway from VTA to the medial olfactory tubercle generates odor-preference and reward Zhijian Zhang1,2†, Qing Liu1†, Pengjie Wen1, Jiaozhen Zhang1, Xiaoping Rao1, Ziming Zhou3, Hongruo Zhang3, Xiaobin He1, Juan Li1, Zheng Zhou4, Xiaoran Xu3, Xueyi Zhang3, Rui Luo3, Guanghui Lv2, Haohong Li2, Pei Cao1, Liping Wang4, Fuqiang Xu1,2* 1Center for Brain Science, Key Laboratory of Magnetic Resonance in Biological Systems, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan, China; 2Wuhan National Laboratory for Optoelectronics, Wuhan, China; 3College of Life Sciences, Wuhan University, Wuhan, China; 4Shenzhen Key Lab of Neuropsychiatric Modulation and Collaborative Innovation Center for Brain Science, CAS Center for Excellence in Brain Science, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China Abstract Odor-preferences are usually influenced by life experiences. However, the neural circuit mechanisms remain unclear. The medial olfactory tubercle (mOT) is involved in both reward and olfaction, whereas the ventral tegmental area (VTA) dopaminergic (DAergic) neurons are considered to be engaged in reward and motivation. Here, we found that the VTA (DAergic)-mOT pathway could be activated by different types of naturalistic rewards as well as odors in DAT-cre mice. Optogenetic activation of the VTA-mOT DAergic fibers was able to elicit preferences for space, location and neutral odor, while pharmacological blockade of the dopamine receptors in the *For correspondence: mOT fully prevented the odor-preference formation. Furthermore, inactivation of the mOT- [email protected] projecting VTA DAergic neurons eliminated the previously formed odor-preference and strongly †These authors contributed affected the Go-no go learning efficiency. -
Optogenetics Controlling Neurons with Photons
Valerie C. Coffey Optogenetics Controlling Neurons with Photons An advancing field of neuroscience uses light to understand how the brain works and to create new tools to treat disease. Wireless optogenetics tools like these tiny implants in live mice are enabling scientists to map the stimulation of certain neurons of the brain to specific responses. J. Rogers/Northwestern Univ. 24 OPTICS & PHOTONICS NEWS APRIL 2018 APRIL 2018 OPTICS & PHOTONICS NEWS 25 In just over a decade, the discovery of numerous opsins with different specializations has allowed scientists and engineers to make rapid progress in mapping brain activity. wo thousand years ago, ancient Egyptians halorhodopsin can silence the neurons in the hypo- knew that the electrical shocks of torpedo thalamus, inducing sleep in living mice. fish, applied to the body, could offer pain In just over a decade, the discovery of numerous relief. Two hundred years ago, physicians opsins with different specializations has allowed scien- understood that electrical stimulation of a tists and engineers to make rapid progress in mapping Tfrog’s spine could control muscle contraction. Today, brain activity, motivated by the hope of solving intrac- electrical therapy underlies many treatments, from table neurological conditions. And it doesn’t hurt that pacemakers to pain control. investment in neuroscience research has grown at the But neuroscience has long awaited a more precise same time. tool for controlling specific types of neurons. Electrical In 2013, the Obama administration announced a stimulation (e-stim) approaches stimulate a large area collaborative public-private effort, the Brain Research without precise spatial control, and can’t distinguish through Advancing Innovative Neurotechnologies between different cell types. -
Computational Neuroscience Meets Optogenetics: Unlocking the Brain’S Secrets
Health & Medicine ︱ Prof Simon Schultz and Dr Konstantin Nikolic Computational neuroscience meets optogenetics: Unlocking the brain’s secrets Working at the interface omposed of billions of specialised responsible for perception, action Simplified models allow researchers to study how the geometry of a neuron’s “dendritic tree” affects its ability to process information. between engineering and nerve cells (called neurons) wired and memory. But this is changing. neuroscience, Professor Simon C together in complex, intricate Schultz and Dr Konstantin webs, the brain is inherently challenging LET THERE BE LIGHT Nikolic at Imperial College to study. Neurons communicate with A powerful new tool (invented by Boyden of Neurotechnology and Director of SHEDDING LIGHT ON THE BRAIN AN INSIGHT INTO NEURONAL GAIN London are developing tools each other by transmitting electrical and and Deisseroth just a little over a decade the Imperial Centre of Excellence in Their innovative approach uses Using two biophysical models of to help us understand the chemical signals along neural circuits: ago) allows researchers to map the brain’s Neurotechnology, Dr Konstantin Nikolic, sophisticated two-photon microscopy, neurons, genetically-modified to include intricate workings of the brain. signals that vary both in space and time. connections, giving unprecedented Associate Professor in the Department optogenetics and electrophysiology two distinct light-sensitive proteins Combining a revolutionary Until now, technical limitations in the access to the workings of the brain. Its of Electrical and Electronic Engineering, to measure (and disturb) patterns of (called opsins): channelrhodopsin-2 technology – optogenetics available research methods to study the impressive resolution enables precise and Dr Sarah Jarvis are taking a unique neuronal activity in vivo (in living tissue). -
Mousecircuits.Org: an Online Repository to Guide the Circuit Era of Disordered Affect
bioRxiv preprint doi: https://doi.org/10.1101/2020.02.16.951608; this version posted February 17, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. MouseCircuits.org: An online repository to guide the circuit era of disordered affect Kristin R. Anderson ID 1,2 and Dani Dumitriu ID 1,2 1Columbia University, Departments of Pediatrics and Psychiatry, New York State Psychiatric Institute, 1051 Riverside Drive, New York, NY 10032 2Columbia University, Zuckerman Institute, 3227 Broadway, New York, NY 10027 Affective disorders rank amongst the most disruptive and tem and the gut microbiome (2,3). However, the mysteries of prevalent psychiatric diseases, resulting in enormous societal the brain, a structure with idiosyncratic and interconnected and economic burden, and immeasurable personal costs. Novel architecture, are unlikely to be revealed solely on the basis of therapies are urgently needed but have remained elusive. The this type of sledgehammer approach. era of circuit-mapping in rodent models of disordered affect, ushered in by recent technological advancements allowing for Enter the era of circuit dissection. In the last precise and specific neural control, has reenergized the hope for decade, groundbreaking technological advances have al- precision psychiatry. Here, we present a novel whole-brain cu- lowed neuroscientists to take control of neural firing with mulative network and critically access the progress made to- impressive precision and specificity (Figure 1) (4–7). -
Functions of Olfactory Receptors Are Decoded from Their Sequence
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.06.895540; this version posted January 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Functions of olfactory receptors are decoded from their sequence Xiaojing Cong,1,†* Wenwen Ren,5,† Jody Pacalon1, Claire A. de March,6 Lun Xu,2 Hiroaki Matsunami,6 Yiqun Yu,2,3* Jérôme Golebiowski1,4* 1 Université Côte d’Azur, CNRS, Institut de Chimie de Nice UMR7272, Nice 06108, France 2 Department of Otolaryngology, Eye, Ear, Nose & Throat Hospital, Shanghai Key Clinical Disciplines of Otorhinolaryngology, Fudan University, Shanghai 200031, People's Republic of China 3 School of Life Sciences, Shanghai University, Shanghai 200444, People's Republic of China 4 Department of Brain and Cognitive Sciences, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, South Korea 5 Institutes of Biomedical Sciences, Fudan University, Shanghai 200031, People's Republic of China 6 Department of Molecular Genetics and Microbiology, and Department of Neurobiology, and Duke Institute for Brain Sciences, Duke University Medical Center, Research Drive, Durham, NC 27710, USA † These authors contributed equally. * Correspondence may be addressed to: [email protected], [email protected] or [email protected] Abstract G protein-coupled receptors (GPCRs) conserve common structural folds and activation mechanisms, yet their ligand spectra and functions are highly diversified. This work investigated how the functional variations in olfactory GPCRs (ORs)−the largest GPCR family−are encoded in the primary sequence. -
Long-Range Gabaergic Projections Contribute to Cortical Feedback
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.19.423599; this version posted December 20, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Long-range GABAergic projections contribute to cortical feedback control of sensory processing. Camille Mazo1,2, *, Soham Saha1, Antoine Nissant1, Enzo Peroni1, Pierre-Marie Lledo1, # and Gabriel Lepousez1,#,* 1 Laboratory for Perception and Memory, Institut Pasteur, F-75015 Paris, France; Centre National de la Recherche Scientifique (CNRS), Unité Mixte de Recherche (UMR-3571), F-75015 Paris, France. * Corresponding authors to whom correspondence should be addressed: Laboratory for Perception and Memory, Institut Pasteur, 25 rue du Dr. Roux, 75 724 Paris Cedex 15, France. Tel: (33) 1 45 68 95 23 E-mail: [email protected] E-mail: [email protected] # Jointly supervised this work 2 now at Champalimaud Research, Champalimaud Center for the Unknown, Lisbon, Portugal Keywords: Sensory circuits, Top-down, Inhibitory, Centrifugal, Olfactory system, Barrel cortex 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.12.19.423599; this version posted December 20, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract In sensory systems, cortical areas send excitatory projections back to subcortical areas to dynamically adjust sensory processing. -
Olfactory Receptor Proteins in Axonal Processes of Chemosensory Neurons
7754 • The Journal of Neuroscience, September 1, 2004 • 24(35):7754–7761 Cellular/Molecular Olfactory Receptor Proteins in Axonal Processes of Chemosensory Neurons Joerg Strotmann, Olga Levai, Joerg Fleischer, Karin Schwarzenbacher, and Heinz Breer Institute of Physiology, University of Hohenheim, 70593 Stuttgart, Germany Olfactoryreceptorsaresupposedtoactnotonlyasmolecularsensorsforodorantsbutalsoascellrecognitionmoleculesguidingtheaxons of olfactory neurons to their appropriate glomerulus in the olfactory bulb. This concept implies that olfactory receptor proteins are located in sensory cilia and in the axons. To approach this critical issue, antibodies were generated against two peptides, one derived from olfactory receptor mOR256–17, one derived from the “mOR37” subfamily. By means of immunohistochemistry and double-labeling studies using transgenic mouse lines as well as Western blot analyses, it was demonstrated that the newly generated antibodies specifi- cally recognized the receptor proteins. To scrutinize the hypothesis that olfactory receptor proteins may also be present in the axonal processes and the nerve terminals, serial sections through the olfactory bulb were probed with the antibodies. Two glomeruli in each bulb were stained by anti-mOR256–17, one positioned in the medial, one in the lateral hemisphere. Fiber bundles approaching the glomeruli through the outer nerve layer also displayed intense immunofluorescence. A similar picture emerged for the antibody anti-mOR37, a small number of glomeruli in the ventral domain -
Estrogen Receptors Α, Β and GPER in the CNS and Trigeminal System - Molecular and Functional Aspects Karin Warfvinge1,2, Diana N
Warfvinge et al. The Journal of Headache and Pain (2020) 21:131 The Journal of Headache https://doi.org/10.1186/s10194-020-01197-0 and Pain RESEARCH ARTICLE Open Access Estrogen receptors α, β and GPER in the CNS and trigeminal system - molecular and functional aspects Karin Warfvinge1,2, Diana N. Krause2,3†, Aida Maddahi1†, Jacob C. A. Edvinsson1,4, Lars Edvinsson1,2,5* and Kristian A. Haanes1 Abstract Background: Migraine occurs 2–3 times more often in females than in males and is in many females associated with the onset of menstruation. The steroid hormone, 17β-estradiol (estrogen, E2), exerts its effects by binding and activating several estrogen receptors (ERs). Calcitonin gene-related peptide (CGRP) has a strong position in migraine pathophysiology, and interaction with CGRP has resulted in several successful drugs for acute and prophylactic treatment of migraine, effective in all age groups and in both sexes. Methods: Immunohistochemistry was used for detection and localization of proteins, release of CGRP and PACAP investigated by ELISA and myography/perfusion arteriography was performed on rat and human arterial segments. Results: ERα was found throughout the whole brain, and in several migraine related structures. ERβ was mainly found in the hippocampus and the cerebellum. In trigeminal ganglion (TG), ERα was found in the nuclei of neurons; these neurons expressed CGRP or the CGRP receptor in the cytoplasm. G-protein ER (GPER) was observed in the cell membrane and cytoplasm in most TG neurons. We compared TG from males and females, and females expressed more ER receptors. For neuropeptide release, the only observable difference was a baseline CGRP release being higher in the pro-estrous state as compared to estrous state. -
Investigations Into Neuronal Cilia Utilizing Mouse Models
INVESTIGATIONS INTO NEURONAL CILIA UTILIZING MOUSE MODELS OF BARDET-BIEDL SYNDROME Dissertation Presented In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Nicolas F. Berbari, BS ***** The Ohio State University 2008 Dissertation Committee: Approved by: Kirk Mykytyn, PhD, Adviser Virginia Sanders, PhD __________________________________________ Georgia Bishop, PhD Adviser Michael Robinson, PhD Integrated Biomedical Sciences Graduate Program ABSTRACT Cilia are hair-like microtubule based cellular appendages that extend 5-30 microns from the surface of most vertebrate cells. Since their initial discovery over a hundred years ago, cilia have been of interest to microbiologists and others studying the dynamics and physiological relevance of their motility. The more recent realization that immotile or primary cilia dysfunction is the basis of several human genetic disorders and diseases has brought the efforts of the biomedical research establishment to bear on this long overlooked and underappreciated organelle. Several human genetic disorders caused by cilia defects have been identified, and include Bardet-Biedl syndrome, Joubert syndrome, Meckel-Gruber syndrome, Alstrom syndrome and orofaciodigital syndrome. One theme of these disorders is their multitude of clinical features such as blindness, cystic kidneys, cognitive deficits and obesity. The fact that many of these cilia disorders present with several features may be due to the ubiquitous nature of the primary cilium and their unrecognized roles in most tissues and cell types. The lack of known function for most primary cilia is no more apparent than in the central nervous system. While it has been known for some time that neurons throughout the brain have primary cilia, their functions remain unknown. -
Odorant Receptors: Regulation, Signaling, and Expression Michele Lynn Rankin Louisiana State University and Agricultural and Mechanical College, [email protected]
Louisiana State University LSU Digital Commons LSU Doctoral Dissertations Graduate School 2002 Odorant receptors: regulation, signaling, and expression Michele Lynn Rankin Louisiana State University and Agricultural and Mechanical College, [email protected] Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_dissertations Recommended Citation Rankin, Michele Lynn, "Odorant receptors: regulation, signaling, and expression" (2002). LSU Doctoral Dissertations. 540. https://digitalcommons.lsu.edu/gradschool_dissertations/540 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Doctoral Dissertations by an authorized graduate school editor of LSU Digital Commons. For more information, please [email protected]. ODORANT RECEPTORS: REGULATION, SIGNALING, AND EXPRESSION A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Doctor of Philosophy In The Department of Biological Sciences By Michele L. Rankin B.S., Louisiana State University, 1990 M.S., Louisiana State University, 1997 August 2002 ACKNOWLEDGMENTS I would like to thank several people who participated in my successfully completing the requirements for the Ph.D. degree. I thank Dr. Richard Bruch for giving me the opportunity to work in his laboratory and guiding me along during the degree program. I am very thankful for the support and generosity of my advisory committee consisting of Dr. John Caprio, Dr. Evanna Gleason, and Dr. Jaqueline Stephens. At one time or another, I performed experiments in each of their laboratories and include that work in this dissertation.