The Computer Science and Physics of Community Detection: Landscapes, Phase Transitions, and Hardness
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Aaron Clauset
Aaron Clauset Contact Department of Computer Science voice: 303{492{6643 Information University of Colorado at Boulder fax: 303{492{2844 430 UCB email: [email protected] Boulder CO, 80309-0430 USA web: www.santafe.edu/∼aaronc Research Network science (methods, theories, applications); Data science, statistical inference, machine learn- Interests ing; Models and simulations; Collective dynamics and complex systems; Rare events, power laws and forecasting; Computational social science; Computational biology and biological computation. Education Ph.D. Computer Science, University of New Mexico (with distinction) 2002 { 2006 B.S. Physics, Haverford College (with honors and concentration in Computer Science) 1997 { 2001 Academic Associate Professor, Computer Science Dept., University of Colorado, Boulder 2018 { present Positions Core Faculty, BioFrontiers Institute, University of Colorado, Boulder 2010 { present External Faculty, Santa Fe Institute 2012 { present Affiliated Faculty, Ecology & Evo. Biology Dept., University of Colorado, Boulder 2011 { present Affiliated Faculty, Applied Mathematics Dept., University of Colorado, Boulder 2012 { present Affiliated Faculty, Information Dept., University of Colorado, Boulder 2015 { present Assistant Professor, Computer Science Dept., University of Colorado, Boulder 2010 { 2018 Omidyar Fellow, Santa Fe Institute 2006 { 2010 Editorial Deputy Editor, Science Advances, AAAS 2017 { present Positions Associate Editor, Science Advances, AAAS 2014 { 2017 Associate Editor, Journal of Complex Networks, Oxford University Press 2012 { 2017 Honors & Top 20 Teachers, College of Engineering, U. Colorado, Boulder 2016 Awards Erd}os-R´enyi Prize in Network Science 2016 (Selected) NSF CAREER Award 2015 { 2020 Kavli Fellow 2014 Santa Fe Institute Public Lecture Series (http://bit.ly/I6t9gf) 2010 Graduation Speaker, U. New Mexico School of Engineering Convocation 2006 Outstanding Graduate Student Award, U. -
Cristopher Moore
Cristopher Moore Santa Fe Institute Santa Fe, NM 87501 [email protected] August 23, 2021 1 Education Born March 12, 1968 in New Brunswick, New Jersey. Northwestern University, B.A. in Physics, Mathematics, and the Integrated Science Program, with departmental honors in all three departments, 1986. Cornell University, Ph.D. in Physics, 1991. Philip Holmes, advisor. Thesis: “Undecidability and Unpredictability in Dynamical Systems.” 2 Employment Professor, Santa Fe Institute 2012–present Professor, Computer Science Department with a joint appointment in the Department of Physics and Astronomy, University of New Mexico, Albuquerque 2008–2012 Associate Professor, University of New Mexico 2005–2008 Assistant Professor, University of New Mexico 2000–2005 Research Professor, Santa Fe Institute 1998–1999 City Councilor, District 2, Santa Fe 1994–2002 Postdoctoral Fellow, Santa Fe Institute 1992–1998 Lecturer, Cornell University Spring 1991 Graduate Intern, Niels Bohr Institute/NORDITA, Copenhagen Summers 1988 and 1989 Teaching Assistant, Cornell University Physics Department Fall 1986–Spring 1990 Computer programmer, Bio-Imaging Research, Lincolnshire, Illinois Summers 1984–1986 3 Other Appointments Visiting Researcher, Microsoft Research New England Fall 2019 Visiting Professor, Ecole´ Normale Sup´erieure October–November 2016 Visiting Professor, Northeastern University October–November 2015 Visiting Professor, University of Michigan, Ann Arbor September–October 2005 Visiting Professor, Ecole´ Normale Sup´erieure de Lyon June 2004 Visiting Professor, -
Curriculum Vitae of Danny Dorling
January 2021 1993 to 1996: British Academy Fellow, Department of Geography, Newcastle University 1991 to 1993: Joseph Rowntree Foundation Curriculum Vitae Fellow, Many Departments, Newcastle University 1987 to 1991: Part-Time Researcher/Teacher, Danny Dorling Geography Department, Newcastle University Telephone: +44(0)1865 275986 Other Posts [email protected] skype: danny.dorling 2020-2023 Advisory Board Member: ‘The political economies of school exclusion and their consequences’ (ESRC project ES/S015744/1). Current appointment: Halford Mackinder 2020-Assited with the ‘Time to Care’ Oxfam report. Professor of Geography, School of 2020- Judge for data visualisation competition Geography and the Environment, The Nuffield Trust, the British Medical Journal, the University of Oxford, South Parks Road, British Medical Association and NHS Digital. Oxford, OX1 3QY 2019- Judge for the annual Royal Geographical th school 6 form essay competition. 2019 – UNDP (United Nations Development Other Appointments Programme) Human Development Report reviewer. 2019 – Advisory Broad member: Sheffield Visiting Professor, Department of Sociology, University Nuffield project on an Atlas of Inequality. Goldsmiths, University of London, 2013-2016. 2019 – Advisory board member - Glasgow Centre for Population Health project on US mortality. Visiting Professor, School of Social and 2019- Editorial Board Member – Bristol University Community Medicine, University of Bristol, UK Press, Studies in Social Harm Book Series. 2018 – Member of the Bolton Station Community Adjunct Professor in the Department of Development Partnership. Geography, University of Canterbury, NZ 2018-2022 Director of the Graduate School, School of Geography and the Environment, Oxford. 2018 – Member of the USS review working group of the Council of the University of Oxford. -
Minimum Circuit Size, Graph Isomorphism, and Related Problems∗
SIAM J. COMPUT. c 2018 Society for Industrial and Applied Mathematics Vol. 47, No. 4, pp. 1339{1372 MINIMUM CIRCUIT SIZE, GRAPH ISOMORPHISM, AND RELATED PROBLEMS∗ ERIC ALLENDERy , JOSHUA A. GROCHOWz , DIETER VAN MELKEBEEKx , CRISTOPHER MOORE{, AND ANDREW MORGANx Abstract. We study the computational power of deciding whether a given truth table can be described by a circuit of a given size (the minimum circuit size problem, or MCSP for short) and of the variant denoted as MKTP, where circuit size is replaced by a polynomially related Kolmogorov measure. Prior to our work, all reductions from supposedly intractable problems to MCSP/MKTP hinged on the power of MCSP/MKTP to distinguish random distributions from distributions pro- duced by hardness-based pseudorandom generator constructions. We develop a fundamentally dif- ferent approach inspired by the well-known interactive proof system for the complement of graph isomorphism (GI). It yields a randomized reduction with zero-sided error from GI to MKTP. We generalize the result and show that GI can be replaced by any isomorphism problem for which the underlying group satisfies some elementary properties. Instantiations include linear code equivalence, permutation group conjugacy, and matrix subspace conjugacy. Along the way we develop encodings of isomorphism classes that are efficiently decodable and achieve compression that is at or near the information-theoretic optimum; those encodings may be of independent interest. Key words. reductions between NP-intermediate problems, graph isomorphism, minimum circuit size problem, time-bounded Kolmogorov complexity AMS subject classifications. 68Q15, 68Q17, 68Q30 DOI. 10.1137/17M1157970 1. Introduction. Finding a circuit of minimum size that computes a given Boolean function constitutes the overarching goal in nonuniform complexity theory. -
A Preferential Attachment Paradox: How Preferential Attachment Combines with Growth to Produce Networks with Log-Normal In-Degree Distributions
A Preferential Attachment Paradox: How Preferential Attachment Combines with Growth to Produce Networks with Log-normal In-degree Distributions Paul Sheridan1,* and Taku Onodera2 1Hirosaki University, Department of Active Life Promotion Science, Hirosaki, 036-8562, Japan 2The University of Tokyo, Institute of Medical Science, Human Genome Center, Tokyo, 108-8639, Japan *[email protected] ABSTRACT Every network scientist knows that preferential attachment combines with growth to produce networks with power-law in-degree distributions. How, then, is it possible for the network of American Physical Society journal collection citations to enjoy a log-normal citation distribution when it was found to have grown in accordance with preferential attachment? This anomalous result, which we exalt as the preferential attachment paradox, has remained unexplained since the physicist Sidney Redner first made light of it over a decade ago. Here we propose a resolution. The chief source of the mischief, we contend, lies in Redner having relied on a measurement procedure bereft of the accuracy required to distinguish preferential attachment from another form of attachment that is consistent with a log-normal in-degree distribution. There was a high-accuracy measurement procedure in use at the time, but it would have have been difficult to use it to shed light on the paradox, due to the presence of a systematic error inducing design flaw. In recent years the design flaw had been recognised and corrected. We show that the bringing of the newly corrected measurement procedure to bear on the data leads to a resolution of the paradox. Introduction The physicist Sidney Redner reported a rather curious anomaly in a decade-old study on the citation statistics of the American Physical Society (APS) journal collection1. -
Network Modularity Controls the Speed of Information Diffusion
Network Modularity Controls the Speed of Information Diffusion 1 2 1 3, Hao Peng, Azadeh Nematzadeh, Daniel M. Romero, and Emilio Ferrara ∗ 1School of Information, University of Michigan 2S&P Global 3Information Sciences Institute, University of Southern California (Dated: July 31, 2020) The rapid diffusion of information and the adoption of social behaviors are of critical importance in situations as diverse as collective actions, pandemic prevention, or advertising and marketing. Although the dynamics of large cascades have been extensively studied in various contexts, few have systematically examined the impact of network topology on the efficiency of information diffusion. Here, by employing the linear threshold model on networks with communities, we demonstrate that a prominent network feature—the modular structure—strongly affects the speed of information diffusion in complex contagion. Our simulations show that there always exists an optimal network modularity for the most efficient spreading process. Beyond this critical value, either a stronger or a weaker modular structure actually hinders the diffusion speed. These results are confirmed by an analytical approximation. We further demonstrate that the optimal modularity varies with both the seed size and the target cascade size, and is ultimately dependent on the network under investigation. We underscore the importance of our findings in applications from marketing to epidemiology, from neuroscience to engineering, where the understanding of the structural design of complex systems focuses on the efficiency of information propagation. I. INTRODUCTION and viral marketing [13, 22]. However, some studies re- vealed that the threshold model is more applicable to the The spread of information in complex networks con- spread of risky or contentious social behaviors for which trols or modulates fundamental processes that can have each additional exposure increases the likelihood of adop- local effects on individual actors and groups thereof, and tion [1, 5, 25, 31, 37]. -
RIBBON TILE INVARIANTS from SIGNED AREA Cristopher Moore
RIBBON TILE INVARIANTS FROM SIGNED AREA Cristopher Moore Computer Science Department and Department of Physics and Astronomy University of New Mexico Albuquerque NM mo orecsunmedu Igor Pak Department of Mathematics MIT Cambridge MA pakmathmitedu May Abstract Ribb on tiles are p olyomino es consisting of n squares laid out in a path each step of which go es north or east Tile invariants were rst intro duced in P where a full basis of invariants of ribb on tiles was conjectured Here we present a complete pro of of the conjecture which works by asso ciating ribb on tiles with certain p olygons in the complex plane and deriving invariants from the signed area of these p olygons Introduction Polyomino tilings have b een an ob ject of attention of serious mathematicians as well as amateurs for many decades G Recently however the interest in tiling problems has grown as some imp ortant ideas and techniques have b een intro duced In P the second author intro duced a tile counting group which app ears to enco de a large amount of information concerning the combinatorics of tilings He made a conjecture on the group structure and obtained several partial results A sp ecial case of the conjecture was later resolved in MP In this pap er we continue this study and complete the pro of of the conjecture Consider the set of ribbon tiles T dened as connected nsquare tiles with no n two squares in the same diagonal x y c as in the gures b elow It is easy to n1 see that jT j as each tile can b e asso ciated with a path of length n in n the square -
Hierarchical Structure and the Prediction of Missing Links in Networks
Hierarchical structure and the prediction of missing links in networks Aaron Clauset,1,3 Cristopher Moore,1,2,3 M. E. J. Newman3,4∗ 1Department of Computer Science and 2Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM 87131, USA 3Santa Fe Institute, 1399 Hyde Park Rd., Santa Fe, NM 87501, USA 4Department of Physics and Center for the Study of Complex Systems, University of Michigan, Ann Arbor, MI 48109, USA ∗To whom correspondence should be addressed. E-mail: [email protected]. Networks have in recent years emerged as an invaluable tool for describing and quan- tifying complex systems in many branches of science (1–3). Recent studies suggest that networks often exhibit hierarchical organization, where vertices divide into groups that further subdivide into groups of groups, and so forth over multiple scales. In many cases these groups are found to correspond to known functional units, such as ecological niches in food webs, modules in biochemical networks (protein interaction networks, metabolic networks, or genetic regulatory networks), or communities in social networks (4–7). Here we present a general technique for inferring hierarchical structure from network data and demonstrate that the existence of hierarchy can simultaneously explain and quanti- tatively reproduce many commonly observed topological properties of networks, such as right-skewed degree distributions, high clustering coefficients, and short path lengths. We further show that knowledge of hierarchical structure can be used to predict missing con- nections in partially known networks with high accuracy, and for more general network 1 structures than competing techniques (8). Taken together, our results suggest that hierar- chy is a central organizing principle of complex networks, capable of offering insight into many network phenomena. -
A Statistical Analysis of Lobbying Networks in Legislative Politics∗
Mapping Political Communities: A Statistical Analysis of Lobbying Networks in Legislative Politics∗ In Song Kimy Dmitriy Kuniskyz January 3, 2018 Abstract A vast literature demonstrates the significance for policymaking of lobbying by special inter- est groups. Yet, empirical studies of political representation have been limited by the difficulty of observing a direct connection between politicians and interest groups. We bridge the two with an original dataset of two distinct observable political behaviors: (1) sponsorship of con- gressional bills, and (2) lobbying on congressional bills. We develop a latent space network model to locate politicians and interest groups in a common \marketplace", where proximity implies a closer political connection or alignment of interests. In contrast to repeated find- ings of ideological latent dimensions in previous literature on such models, we find distinct issue-specific political communities of interest groups and politicians. To validate the existence and interpretation of the community structure, we apply stochastic block models and a bipar- tite link community model to explicitly model political actors' community memberships. We consistently find that the latent preference structure of politicians and interest groups is non- ideological and primarily corresponds to industry interests and topical congressional committee memberships. Our findings therefore provide evidence for the existence of powerful political networks in U.S. legislative politics that do not align with the ideological polarization observed in electoral politics. Keywords: Network analysis, lobbying, ideal point estimation, scaling, stochastic block model, link community model, community detection. ∗We thank J. Lawrence Broz, Devin Caughey, Nolan McCarty, Cristopher Moore, Michael Peress, Yunkyu Sohn, and Hye Young You for helpful comments. -
Small-World File-Sharing Communities
Small-World File-Sharing Communities Adriana Iamnitchi, Matei Ripeanu, Ian Foster Department of Computer Science The University of Chicago Chicago, IL 60637 {anda, matei, foster}@cs.uchicago.edu Abstract— Web caches, content distribution networks, ration for designing efficient mechanisms for large-scale, peer-to-peer file sharing networks, distributed file systems, dynamic, self-organizing resource-sharing communities. and data grids all have in common that they involve a We look at these communities in a novel way: we community of users who generate requests for shared study the relationships that form among users based on data. In each case, overall system performance can be the data in which they are interested. We capture and improved significantly if we can first identify and then quantify these relationships by modeling the community exploit interesting structure within a community’s access patterns. To this end, we propose a novel perspective on file as a data-sharing graph. To this end, we propose a sharing based on the study of the relationships that form new structure that captures common user interests in among users based on the files in which they are interested. data (Section III) and justify its utility with studies We propose a new structure that captures common user on three data-distribution systems (Section IV): a high- interests in data—the data-sharing graph— and justify its energy physics collaboration, the Web, and the Kazaa utility with studies on three data-distribution systems: a peer-to-peer network. We find small-world patterns in the high-energy physics collaboration, the Web, and the Kazaa data-sharing graphs of all three communities (SectionV). -
Annual Report 2010-11
Institute for the Study of the Americas Annual Report 2010-2011 Mission and Aims Institute for the Study of the Americas Annual Report 2010-2011 Table of Contents Governance 2 Te Institute was founded in August 2004 through a merger of the Institute of Latin American Studies (ILAS) with Staf List 3 the Institute of United States Studies (IUSS), both of which had been founded in 1965 at 31 Tavistock Square. Like its predecessors, the new Institute forms part of the University of London’s School of Advanced Study. Director’s Report 4 ISA occupies a unique position at the core of academic study of the region in the UK. Internationally recognised as a centre of excellence for research and research facilitation, ISA also provides resources to the wider academic Academic Staf Profles 8 community, serving and strengthening national networks of North Americanist, Latin Americanist and Caribbeanist Fellowships 20 scholars. Te Institute actively maintains and builds ties with cultural, diplomatic and business organisations with interests in the Americas and, as part of the School of Advanced Study within the University of London, benefts from Events 25 academic opportunities, facilities and stimulation across and between a wide range of subject felds in the humanities and social sciences. Postgraduate Programmes 36 Te Council of the University of London approved the establishment of ISA on the understanding that it would be dedicated to teaching and research, not just on the USA and Latin America, but to the Americas as a whole, with Publications 40 proper attention to Canada and the Caribbean. ISA will uphold the dedication to area studies and multi-disciplinarity that animated its predecessors. -
Complex Systems 535/Physics 508: Network Theory
Complex Systems 535/Physics 508: Network Theory Fall 2017 Time: Tuesday and Thursday, 10–11:30am Room: 1028 Dana Building Instructor: Mark Newman Office: 322 West Hall Office hours: Mondays 2–4pm Email: [email protected] Web site: Everything on this information sheet, along with a complete syllabus for the semester, can be found on the course web site: http://www.umich.edu/˜mejn/courses/2017/cscs535 Description: This course will introduce and develop the mathematical theory of networks, particularly social and technologi- cal networks, with applications to network-driven phenomena in the Internet, network resilience, search engines, epidemiology, and many other areas. Topics covered will include experimental studies of social, technological, and biological networks; methods and computer algorithms for the analysis and interpretation of network data; graph theory; models of networks including random graphs and preferential attachment models; community structure; percolation theory; network search. Requirements: Students should have studied calculus and linear algebra before taking the course, and should in particular be comfortable with the solution of linear differential equations and with the calculation and properties of eigenvalues and eigenvectors of matrices. In addition, a moderate portion of the course, perhaps four or five lectures, will deal with computer methods for studying networks. Some experience with computer programming will be a great help in understanding this part of the course. Coursework: There will be weekly graded problem sets, consisting both of theory questions and of problems demonstrating applications of theory to example networks. There will be three midterm exams but no final. Grade will be 25% on the homeworks and 25% on each of the midterms.