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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, Konan 4-5-7, Minato, Tokyo108-8477, Japan
Asian J. Med. Biol. Res. 2016, 2 (4), 689-695; doi: 10.3329/ajmbr.v2i4.31016 Asian Journal of Medical and Biological Research ISSN 2411-4472 (Print) 2412-5571 (Online) www.ebupress.com/journal/ajmbr Article Species identification and the biological properties of several Japanese starfish Farhana Sharmin*, Shoichiro Ishizaki and Yuji Nagashima Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, Konan 4-5-7, Minato, Tokyo108-8477, Japan *Corresponding author: Farhana Sharmin, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, Konan 4-5-7, Minato, Tokyo 108-8477, Japan. E-mail: [email protected] Received: 07 December 2016/Accepted: 20 December 2016/ Published: 29 December 2016 Abstract: Marine organisms are a rich source of natural products with potential secondary metabolites that have great pharmacological activity. Starfish are known as by-catch products in the worldwide fishing industry and most of starfish have been got rid of by fire destruction without any utilization. On the other hand, starfish are considered as extremely rich sources of biological active compounds in terms of having pharmacological activity. In the present study, molecular identification of starfish species, micronutrient content and hemolytic activity from Luidia quinaria, Astropecten scoparius, and Patiria pectinifera were examined. Nucleotide sequence analysis of the 16S rRNA gene fragment of mitochondrial DNA indicated that partial sequences of PCR products of the species was identical with that of L. quinaria, A. scoparius, and P. pectinifera. From the results of micronutrient contents, there were no great differences on the micronutrient among species. -
Astropecten Aranciacus (Asteroidea, Echinodermata) in Abh Ingigkeit Von Umweltbedingungen
Helgol~inder wiss. Meeresunters. 28, 167-182 (1976) Vorkommen yon Astropecten aranciacus (Asteroidea, Echinodermata) in Abh ingigkeit von Umweltbedingungen H. BURLA, B. PABST & W. STAHEL Zoologiscbes Museum der Universitlit Zi~ricb; Ziirich, Scbweiz ABSTRACT: Environmental conditions affecting the occurrence of Astropecten aranciacus (Asteroidea, Echinodermata). In shallow water off the north coast of Sardinia (western Mediterranean) the frequency of occurrence of the starfish Astropecten aranciacus was recorded in 70 sample areas of 25 ms each. Four environmental factors, namely depth, average sand grain diameter, number of mollusc species, and number of individuals of the genus Echino- cardium proved to be related to the abundance of A. aranciacus. The sediment contained many species, each, as a rule, being present at low abundance. The molluscs found and their sizes are listed. EINLEITUNG Astropecten aranciacus ist im Mittelmeer die gr&3te Art seiner Gattung, tritt an manchen K~istenstellen reichlicla auf und diirflce in seinem Habitat, dem sandigen Infra- litoral, als unspezialisierter R~uber einen kontrollierenden Einflui3 auf die Best~inde seiner Beutetiere ausi~ben. Doch wissen wir nicht, yon welchen EigenschafLen des Habi- tats A. aranciacus im Vorkommen und damit in der Wirkung auf andere Glieder der Lebensgemeinschafi beeinflut~t wird. PICARD (1965) #,ihtt A. aranciacus zur SGCF-Biocoenose (,,sables grossiers et fins graviers sous l'influence des courants de fond"). MASS~ (1966) bezeichnet A. aranciacus als wenig anspruchsvoll: ,,L'esp&e vit aussi bien sur des graviers real class& que sur des sables fins vaseux"; er finder sie ,,surtout dans tes fonds meubles qui bordent les herbiers des Posidonies", ober- wie unterhalb solcher Rasen. -
IMAP), As Presented in Annex to This Decision; 2
UNEP(DEPI)/MED IG.22/28 Page 419 Decision IG.22/7 Integrated Monitoring and Assessment Programme of the Mediterranean Sea and Coast and Related Assessment Criteria The 19th Meeting of the Contracting Parties to the Convention for the Protection of the Marine Environment and the Coastal Region of the Mediterranean, hereinafter referred to as “the Barcelona Convention”, Recalling Decision IG.17/6 of the 15th Meeting of the Contracting Parties providing for “A healthy Mediterranean with marine and coastal ecosystems that are productive and biologically diverse for the benefit of present and future generations”and the 7 steps roadmap for the implementation of the ecoystem approach, including on monitoring; Recalling Decision IG. 20/4 of the 17th Meeting of the Contracting Parties and Decision IG. 21/3 of the 18th Meeting of the Contracting Parties on the ecosystem approach; Recalling Article 12 of the Barcelona Convention and relevant provisions from its Protocols such as Articles8 and 13 of the Protocol for the Protection of the Mediterranean Sea against Pollution from Land-Based Sources and Activities; Article 5 of the Protocol Concerning Cooperation in Preventing Pollution from Ships and, in Cases of Emergency, Combating Pollution of the Mediterranean Sea; Articles 3, 15 and 20 of the Protocol Concerning Specially Protected Areas and Biological Diversity in the Mediterranean; and Article 16 of the Protocol on Integrated Coastal Zone Management in the Mediterranean; Having considered the reports of the Correspondence Groups on Monitoring and on Good Environmental Status and Targets, as well as of the Ecosystem Approach Coordination Group Meetings; Appreciating the support of donors and contribution of competent partner organizations in the development of the Integrated Monitoring and Assessment Programme of the Mediterranean Sea and Coast and Related Assessment Criteria; 1. -
Appendix 1 : Marine Habitat Types Definitions. Update Of
Appendix 1 Marine Habitat types definitions. Update of “Interpretation Manual of European Union Habitats” COASTAL AND HALOPHYTIC HABITATS Open sea and tidal areas 1110 Sandbanks which are slightly covered by sea water all the time PAL.CLASS.: 11.125, 11.22, 11.31 1. Definition: Sandbanks are elevated, elongated, rounded or irregular topographic features, permanently submerged and predominantly surrounded by deeper water. They consist mainly of sandy sediments, but larger grain sizes, including boulders and cobbles, or smaller grain sizes including mud may also be present on a sandbank. Banks where sandy sediments occur in a layer over hard substrata are classed as sandbanks if the associated biota are dependent on the sand rather than on the underlying hard substrata. “Slightly covered by sea water all the time” means that above a sandbank the water depth is seldom more than 20 m below chart datum. Sandbanks can, however, extend beneath 20 m below chart datum. It can, therefore, be appropriate to include in designations such areas where they are part of the feature and host its biological assemblages. 2. Characteristic animal and plant species 2.1. Vegetation: North Atlantic including North Sea: Zostera sp., free living species of the Corallinaceae family. On many sandbanks macrophytes do not occur. Central Atlantic Islands (Macaronesian Islands): Cymodocea nodosa and Zostera noltii. On many sandbanks free living species of Corallinaceae are conspicuous elements of biotic assemblages, with relevant role as feeding and nursery grounds for invertebrates and fish. On many sandbanks macrophytes do not occur. Baltic Sea: Zostera sp., Potamogeton spp., Ruppia spp., Tolypella nidifica, Zannichellia spp., carophytes. -
Transcriptomics Reveals Tissue/Organ-Specific Differences in Gene Expression in the Starfish Patiria Pectinifera Chan-Hee Kima
1 Transcriptomics reveals tissue/organ-specific differences in gene expression in the starfish 2 Patiria pectinifera 3 4 Chan-Hee Kima, Hye-Jin Goa, Hye Young Oha, Yong Hun Job, Maurice R. Elphickc, and Nam Gyu 5 Parka,† 6 7 aDepartment of Biotechnology, College of Fisheries Sciences, Pukyong National University, 45 8 Yongso-ro, Nam-gu, Busan 48513, Korea 9 bDivision of Plant Biotechnology, Institute of Environmentally-Friendly Agriculture (IEFA), College 10 of Agriculture and Life Sciences, Chonnam National University, Gwangju 500-757, Korea 11 cSchool of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS 12 UK 13 14 15 †Corresponding author: Nam Gyu Park, Department of Biotechnology, College of Fisheries Sciences, 16 Pukyong National University, 45 Yongso-ro, Nam-gu, Busan 48513, Korea, Telephone: +82 51 17 6295867, Fax: +82 51 6295863, e-mail: [email protected] 1 18 Abstract 19 Starfish (Phylum Echinodermata) are of interest from an evolutionary perspective because as 20 deuterostomian invertebrates they occupy an “intermediate” phylogenetic position with respect to 21 chordates (e.g. vertebrates) and protostomian invertebrates (e.g. Drosophila). Furthermore, starfish 22 are model organisms for research on fertilization, embryonic development, innate immunity and tissue 23 regeneration. However, large-scale molecular data for starfish tissues/organs are limited. To provide a 24 comprehensive genetic resource for the starfish Patiria pectinifera, we report de novo transcriptome 25 assemblies and global gene expression analysis for six P. pectinifera tissues/organs – body wall 26 (BW), coelomic epithelium (CE), tube feet (TF), stomach (SM), pyloric caeca (PC) and gonad (GN). 27 A total of 408 million high-quality reads obtained from six cDNA libraries were assembled de novo 28 using Trinity, resulting in a total of 549,625 contigs with a mean length of 835 nucleotides (nt), an 29 N50 of 1,473 nt, and GC ratio of 42.52%. -
Reproductive Biology in the Starfish Echinaster (Othilia) Guyanensis (Echinodermata: Asteroidea) in Southeastern Brazil
ZOOLOGIA 27 (6): 897–901, December, 2010 doi: 10.1590/S1984-46702010000600010 Reproductive biology in the starfish Echinaster (Othilia) guyanensis (Echinodermata: Asteroidea) in southeastern Brazil Fátima L. F. Mariante1; Gabriela B. Lemos1; Frederico J. Eutrópio1; Rodrigo R. L. Castro1 & Levy C. Gomes1, 2 1 Centro Universitário Vila Velha. Rua Comissário José Dantas de Melo 21, Boa Vista, 29102-770 Vila Velha, ES, Brazil. E-mail: [email protected]; [email protected]; [email protected]; [email protected] 2 Corresponding author. E-mail: [email protected] ABSTRACT. Echinaster (Othilia) guyanensis Clark, 1987 is an endangered starfish distributed throughout the Caribbean and Atlantic Ocean. Even though it has been extensively harvested, little is known about the biology and ecology of this starfish. Here, we examine reproduction seasonality in E. (O.) guyanensis. Individuals were collected monthly for one year, including four complete lunar phases. The gonad index (GI) was calculated to determine annual and monthly reproductive peaks. Gametogenesis stages were also determined. Sex ratio was 1:1.33 (M:F). Gonadosomatic index, body weight, central disc width and arm length were similar for both sexes. Gonads were present in all animals with arm length greater than 36.2 mm. Lunar phase was not associated with E. (O.) guyanensis reproduction. GI and gametogenesis patterns suggest that starfish have an annual reproductive peak with spawning during autumn months (March to May). KEY WORDS. Brazil; reproduction; gametogenesis; -
Sphingolipids of Asteroidea and Holothuroidea: Structures and Biological Activities
marine drugs Review Sphingolipids of Asteroidea and Holothuroidea: Structures and Biological Activities Timofey V. Malyarenko 1,2,*, Alla A. Kicha 1, Valentin A. Stonik 1,2 and Natalia V. Ivanchina 1,* 1 G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Pr. 100-let Vladivostoku 159, 690022 Vladivostok, Russia; [email protected] (A.A.K.); [email protected] (V.A.S.) 2 Department of Bioorganic Chemistry and Biotechnology, School of Natural Sciences, Far Eastern Federal University, Sukhanova Str. 8, 690000 Vladivostok, Russia * Correspondence: [email protected] (T.V.M.); [email protected] (N.V.I.); Tel.: +7-423-2312-360 (T.V.M.); Fax: +7-423-2314-050 (T.V.M.) Abstract: Sphingolipids are complex lipids widespread in nature as structural components of biomembranes. Commonly, the sphingolipids of marine organisms differ from those of terres- trial animals and plants. The gangliosides are the most complex sphingolipids characteristic of vertebrates that have been found in only the Echinodermata (echinoderms) phylum of invertebrates. Sphingolipids of the representatives of the Asteroidea and Holothuroidea classes are the most studied among all echinoderms. In this review, we have summarized the data on sphingolipids of these two classes of marine invertebrates over the past two decades. Recently established structures, properties, and peculiarities of biogenesis of ceramides, cerebrosides, and gangliosides from starfishes and holothurians are discussed. The purpose of this review is to provide the most complete informa- tion on the chemical structures, structural features, and biological activities of sphingolipids of the Asteroidea and Holothuroidea classes. -
National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
National monitoring program for biodiversity and non-indigenous species in Egypt January 2016 1 TABLE OF CONTENTS page Acknowledgements 3 Preamble 4 Chapter 1: Introduction 8 Overview of Egypt Biodiversity 37 Chapter 2: Institutional and regulatory aspects 39 National Legislations 39 Regional and International conventions and agreements 46 Chapter 3: Scientific Aspects 48 Summary of Egyptian Marine Biodiversity Knowledge 48 The Current Situation in Egypt 56 Present state of Biodiversity knowledge 57 Chapter 4: Development of monitoring program 58 Introduction 58 Conclusions 103 Suggested Monitoring Program Suggested monitoring program for habitat mapping 104 Suggested marine MAMMALS monitoring program 109 Suggested Marine Turtles Monitoring Program 115 Suggested Monitoring Program for Seabirds 117 Suggested Non-Indigenous Species Monitoring Program 121 Chapter 5: Implementation / Operational Plan 128 Selected References 130 Annexes 141 2 AKNOWLEGEMENTS 3 Preamble The Ecosystem Approach (EcAp) is a strategy for the integrated management of land, water and living resources that promotes conservation and sustainable use in an equitable way, as stated by the Convention of Biological Diversity. This process aims to achieve the Good Environmental Status (GES) through the elaborated 11 Ecological Objectives and their respective common indicators. Since 2008, Contracting Parties to the Barcelona Convention have adopted the EcAp and agreed on a roadmap for its implementation. First phases of the EcAp process led to the accomplishment of 5 steps of the scheduled 7-steps process such as: 1) Definition of an Ecological Vision for the Mediterranean; 2) Setting common Mediterranean strategic goals; 3) Identification of an important ecosystem properties and assessment of ecological status and pressures; 4) Development of a set of ecological objectives corresponding to the Vision and strategic goals; and 5) Derivation of operational objectives with indicators and target levels. -
The Echinoderm Fauna of Turkey with New Records from the Levantine Coast of Turkey
Proc. of middle East & North Africa Conf. For Future of Animal Wealth THE ECHINODERM FAUNA OF TURKEY WITH NEW RECORDS FROM THE LEVANTINE COAST OF TURKEY Elif Özgür1, Bayram Öztürk2 and F. Saadet Karakulak2 1Faculty of Fisheries, Akdeniz University, TR-07058 Antalya, Turkey 2İstanbul University, Faculty of Fisheries, Ordu Cad.No.200, 34470 Laleli- Istanbul, Turkey Corresponding author e-mail: [email protected] ABSTRACT The echinoderm fauna of Turkey consists of 80 species (two Crinoidea, 22 Asteroidea, 18 Ophiuroidea, 20 Echinoidea and 18 Holothuroidea). In this study, seven echinoderm species are reported for the first time from the Levantine coast of Turkey. These are, five ophiroid species; Amphipholis squamata, Amphiura chiajei, Amphiura filiformis, Ophiopsila aranea, and Ophiothrix quinquemaculata and two echinoid species; Echinocyamus pusillus and Stylocidaris affinis. Turkey is surrounded by four seas with different hydrographical characteristics and Turkish Straits System (Çanakkale Strait, Marmara Sea and İstanbul Strait) serve both as a biological corridor and barrier between the Aegean and Black Seas. The number of echinoderm species in the coasts of Turkey also varies due to the different biotic environments of these seas. There are 14 echinoderm species reported from the Black Sea, 19 species from the İstanbul Strait, 51 from the Marmara Sea, 71 from the Aegean Sea and 42 from the Levantine coasts of Turkey. Among these species, Asterias rubens, Ophiactis savignyi, Diadema setosum, and Synaptula reciprocans are alien species for the Turkish coasts. Key words: Echinodermata, new records, Levantine Sea, Turkey. Cairo International Covention Center , Egypt , 16 - 18 – October , (2008), pp. 571 - 581 Elif Özgür et al. -
The Red Knob Starfish
Redfish April, 2012 (Issue #10) Specialist Stars the Red Knob Starfish Reef Cichlids Marine Feeding your corals! Pseudotropheus flavus! Surgeons & tangs explored! Marine Aqua One Wavemakers.indd 1 11/04/12 2:55 PM Redfish contents redfishmagazine.com.au 4 About 5 Off the Shelf 7 Pseudotropheus flavus Redfish is: Jessica Drake, Nicole Sawyer, 10 Today in the Fishroom Julian Corlet & David Midgley Email: [email protected] 18 Surgeonfishes Web: redfishmagazine.com.au Facebook: facebook.com/redfishmagazine Twitter: @redfishmagazine 28 Horned Starfish Redfish Publishing. Pty Ltd. PO Box 109 Berowra Heights, 32 Feeding Corals NSW, Australia, 2082. ACN: 151 463 759 38 Community listing This month’s Eye Candy Contents Page Photos cour- tesy: (Top row. Left to Right) ‘Sweetlips’ by Jon Connell ‘Fish pond at the University of Chicago’ by Steve Browne & John Verkleir ‘rainbowfish’ by boscosami@flickr ‘Tarpon’ by Ines Hegedus-Garcia ‘National Arboretum - Koi Pond II’ by Michael Bentley (Bottom row. Left to Right) ‘Being Watched’ by Tony Alter ‘Untitled’ by Keith Bellvay ‘Clownfish’ by Erica Breetoe ‘Yellow Watchman Goby’ by Clay van Schalkwijk Two Caribbean Flamingo Tongue ‘Horned Viper’ by Paul Albertella Snails (Cyphona gibbosum) feeding on a soft-coral (Plexaura flexuosa). Photo by Laszlo Ilyes The Fine Print Redfish Magazine General Advice Warning The advice contained in this publication is general in nature and has been prepared without understanding your personal situ- ation, experience, setup, livestock and/or environmental conditions. This general advice is not a substitute for, or equivalent of, advice from a professional aquarist, aquarium retailer or veterinarian. Distribution We encourage you to share our website address online, or with friends. -
Contribution to the Anatomical Study of Asteroids: a Translation of Contribution À L’Ètude Anatomique Des Astèrides
University of South Florida Scholar Commons Integrative Biology Books Integrative Biology 1887 Contribution to the Anatomical Study of Asteroids: A translation of Contribution À L’ètude Anatomique Des Astèrides Lucien Cuénot John Lawrence University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/bin_books Recommended Citation Cuénot, L. (2020). Contribution to the Anatomical Study of Asteroids: A translation of Contribution À L’ètude Anatomique Des Astèrides (J. M. Lawrence, Trans.) This Book is brought to you for free and open access by the Integrative Biology at Scholar Commons. It has been accepted for inclusion in Integrative Biology Books by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. THESIS PRÉSENTÉS A LA FACULTÈ DES SCIENCES NATURELLES DE PARIS POUR OBTENIR LE GRADE DE DOCTEUR ÈS SCIENCES NATURELLES BY L. CUÉNOT LICENCIÉ ES SCIENCIES NATURELLES DE LA FACULTÉ DE PARIS CONTRIBUTION À L’ÈTUDE ANATOMIQUE DES ASTÈRIDES. Soutennes le 11 novembre, devant la Commission d’Examen HEBERT, Président DE LACAZE-DEUTHIERS, Examinateurs, BONNER THESIS PRESENTED TO TO THE FACULTY OF SCIENCES OF PARIS TO OBTAIN THE DEGREE OF DOCTOR IN NATURAL SCIENCES BY L. CUÉNOT LICENCIÉ IN NATURAL SCIENCES FROM THE FACULTY OF PARIS CONTRIBUTION TO THE ANATOMICAL STUDY OF ASTEROIDS Defended November 11, before the Examining Committee HEBERT, President DE LACAZE-DEUTHIERS, Examiners BONNER ----- POITIERS TYPOPGRAPHIE OUDIN 4, RUE DE L’ÉPERON, 4 1887 Translator’s note: Lucien Cuénot 1906 Lucien Claude Marie Julien Cuénot (21 October 1866–7 January 1951). Cuénot was a student of Lacaze-Duthiers at the Faculty of Sciences of the Sorbonne.