Organic Electrochemistry: Synthesis and Functionalization of Β-Lactams In
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4-Dimethylamino Pyridine (Dmap) Catalyst with Fluxional Chirality
4-DIMETHYLAMINO PYRIDINE (DMAP) CATALYST WITH FLUXIONAL CHIRALITY: SYNTHESIS AND APPLICATIONS A Dissertation Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Gaoyuan Ma In Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY Major Department: Chemistry and Biochemistry November 2015 Fargo, North Dakota North Dakota State University Graduate School Title 4-Dimethylamino Pyridine (DMAP) Catalyst with Fluxional Chirality: Synthesis and Applications By Gaoyuan Ma The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of DOCTOR OF PHILOSOPHY SUPERVISORY COMMITTEE: Prof. Mukund P. Sibi Chair Prof. Gregory R. Cook Prof. Pinjing Zhao Prof. Dean C. Webster Approved: 11/30/2015 Prof. Gregory R. Cook Date Department Chair ABSTRACT Organocatalysis using small organic molecules to catalyze organic transformations, has emerged as a powerful synthetic tool that is complementary to metal-catalyzed transformations and remarkably promote stereoselective synthesis. Our group has designed useful templates, ligands, and additives that use fluxional groups to control and/or enhance stereoselectivity in a variety of asymmetric transformations. A key feature of this strategy is that the size of the fluxional substituent can be varied readily. As an extension of this strategy we became interested in developing efficient and broadly applicable and adjustable 4-dimethylaminopyridine (DMAP) organocatalysts. In our design, we surmised that a fluxional group would be effective in relaying stereochemical information from the fixed chiral center to the catalytic center of DMAP. Presented herein the synthesis of novel fluxionally chiral DMAP catalysts and their application in the acylative kinetic resolution of secondary alcohols and axially chiral biaryls, dynamic kinetic resolution of chiral biaryls with low rotation barriers and allylic substitution reactions. -
Synthesis and Consecutive Reactions of Α-Azido Ketones: a Review
Molecules 2015, 20, 14699-14745; doi:10.3390/molecules200814699 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Review Synthesis and Consecutive Reactions of α-Azido Ketones: A Review Sadia Faiz 1,†, Ameer Fawad Zahoor 1,*, Nasir Rasool 1,†, Muhammad Yousaf 1,†, Asim Mansha 1,†, Muhammad Zia-Ul-Haq 2,† and Hawa Z. E. Jaafar 3,* 1 Department of Chemistry, Government College University Faisalabad, Faisalabad-38000, Pakistan, E-Mails: [email protected] (S.F.); [email protected] (N.R.); [email protected] (M.Y.); [email protected] (A.M.) 2 Office of Research, Innovation and Commercialization, Lahore College for Women University, Lahore-54600, Pakistan; E-Mail: [email protected] 3 Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia, Serdang-43400, Selangor, Malaysia † These authors contributed equally to this work. * Authors to whom correspondence should be addressed; E-Mails: [email protected] (A.F.Z.); [email protected] (H.Z.E.J.); Tel.: +92-333-6729186 (A.F.Z.); Fax: +92-41-9201032 (A.F.Z.). Academic Editors: Richard A. Bunce, Philippe Belmont and Wim Dehaen Received: 20 April 2015 / Accepted: 3 June 2015 / Published: 13 August 2015 Abstract: This review paper covers the major synthetic approaches attempted towards the synthesis of α-azido ketones, as well as the synthetic applications/consecutive reactions of α-azido ketones. Keywords: α-azido ketones; synthetic applications; heterocycles; click reactions; drugs; azides 1. Introduction α-Azido ketones are very versatile and valuable synthetic intermediates, known for their wide variety of applications, such as in amine, imine, oxazole, pyrazole, triazole, pyrimidine, pyrazine, and amide alkaloid formation, etc. -
Topologically Designed Cylindrical and Spherical Building
TOPOLOGICALLY DESIGNED CYLINDRICAL AND SPHERICAL BUILDING BLOCKS TO CONSTRUCT MODULAR-ASSEMBLED STRUCTURES IN GIANT SHAPE-AMPHPHILES A Dissertation Presented to The Graduate Faculty of The University of Akron In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Jing Jiang May 2018 TOPOLOGICALLY DESIGNED CYLINDRICAL AND SPHERICAL BUILDING BLOCKS TO CONSTRUCT MODULAR-ASSEMBLED STRUCTURES IN GIANT SHAPE-AMPHPHILES Jing Jiang Dissertation Approved: Accepted: Advisor Department Chair Dr. Stephen Z. D. Cheng Dr. Coleen Pugh Committee Chair Dean of the College Dr. Toshikazu Miyoshi Dr. Eric J. Amis Committee Member Dean of the Graduate School Dr. Tianbo Liu Dr. Chand K. Midha Committee Member Date Dr. Yu Zhu Committee Member Dr. Chrys Wesdemiotis ii ABSTRACT Giant shape amphiphiles with isobutyl polyhedral oligomeric silsesquioxane (BPOSS) cages as the periphery at two discotic trisubstituted derivative of benzene cores were specifically designed and synthesized. Depending upon the number of BPOSS cages, these molecules first assembled into either cylindrical or spherical units via π-π interactions among the core unites. The packing of the molecules is mandated by the steric hindrance of the BPOSS cages at the periphery with hydrogen bonding interactions. If the space-packing is allowed, the cylindrical building block can form. Otherwise, the cylindrical building block will be forced to interrupt periodically and to form spherical building blocks. These units can further modular assemble into supramolecular structures. The cylindrical units form columnar structures with both hexagonal and rectangular packing, while the spherical units construct a Frank-Kasper A15 phase, similar to the metal alloy structures. In addition, based on the mechanism proposed by this work, five more giant shape amphiphiles with high steric hindrance on the periphery were synthesized, these giant shape amphiphiles successfully formed A15 phases with precisely size control, iii validating the reliability of this strategy. -
Staudinger Ligation: a Peptide from a Thioester and Azide
ORGANIC LETTERS 2000 Staudinger Ligation: A Peptide from a Vol. 2, No. 13 Thioester and Azide 1939-1941 Bradley L. Nilsson,† Laura L. Kiessling,†,‡ and Ronald T. Raines*,†,‡ Departments of Chemistry and Biochemistry, UniVersity of Wisconsin-Madison, Madison, Wisconsin 53706 [email protected] Received May 4, 2000 ABSTRACT The technique of native chemical ligation enables the total chemical synthesis of proteins. This method is limited, however, by an absolute requirement for a cysteine residue at the ligation juncture. Here, this restriction is overcome with a new chemical ligation method in which a phosphinobenzenethiol is used to link a thioester and azide. The product is an amide with no residual atoms. New methods are facilitating the total chemical synthesis of residue in one peptide attacks the carbon of a C-terminal proteins.1 In particular, Kent and others have developed an thioester in another peptide to produce, ultimately, an amide elegant means to stitch together two unprotected peptides in bond between the two peptides (Scheme 1). Recently, Muir aqueous solution.2 In this method, which is called “native chemical ligation”, the thiolate of an N-terminal cysteine Scheme 1 † Department of Chemistry. ‡ Department of Biochemistry. (1) For historical references, see: (a) Merrifield, R. B. Science 1984, 232, 341-347. (b) Kent, S. B. Annu. ReV. Biochem. 1988, 57, 957-989. (c) Kaiser, E. T. Acc. Chem. Res. 1989, 22,47-54. (2) Dawson, P. E.; Muir, T. W.; Clark-Lewis, I.; Kent, S. B. Science 1994, 266, 776-779. For important precedents, see: (a) Wieland, T.; Bokelmann, E.; Bauer, L.; Lang, H. -
Ketenes 25/01/2014 Part 1
Baran Group Meeting Hai Dao Ketenes 25/01/2014 Part 1. Introduction Ph Ph n H Pr3N C A brief history Cl C Ph + nPr NHCl Ph O 3 1828: Synthesis of urea = the starting point of modern organic chemistry. O 1901: Wedekind's proposal for the formation of ketene equivalent (confirmed by Staudinger 1911) Wedekind's proposal (1901) 1902: Wolff rearrangement, Wolff, L. Liebigs Ann. Chem. 1902, 325, 129. 2 Wolff adopt a ketene structure in 1912. R 2 hν R R2 1905: First synthesis and characterization of a ketene: in an efford to synthesize radical 2, 1 ROH R C Staudinger has synthesized diphenylketene 3, Staudinger, H. et al., Chem. Ber. 1905, 1735. N2 1 RO CH or Δ C R C R1 1907-8: synthesis and dicussion about structure of the parent ketene, Wilsmore, O O J. Am. Chem. Soc. 1907, 1938; Wilsmore and Stewart Chem. Ber. 1908, 1025; Staudinger and Wolff rearrangement (1902) O Klever Chem. Ber. 1908, 1516. Ph Ph Cl Zn Ph O hot Pt wire Zn Br Cl Cl CH CH2 Ph C C vs. C Br C Ph Ph HO O O O O O O O 1 3 (isolated) 2 Wilsmore's synthesis and proposal (1907-8) Staudinger's synthesis and proposal (1908) wanted to make Staudinger's discovery (1905) Latest books: ketene (Tidwell, 1995), ketene II (Tidwell, 2006), Science of Synthesis, Vol. 23 (2006); Latest review: new direactions in ketene chemistry: the land of opportunity (Tidwell et al., Eur. J. Org. Chem. 2012, 1081). Search for ketenes, Google gave 406,000 (vs. -
Enantioselective Synthesis of Β-Amino Acids: a Review
l ch cina em Ashfaq et al. di is Med chem 2015, 5:7 e tr M y Medicinal chemistry DOI: 10.4172/2161-0444.1000278 ISSN: 2161-0444 Review Article Open Access Enantioselective Synthesis of β-amino acids: A Review Muhammad Ashfaq1*, RukhsanaTabassum1, Muhammad Mahboob Ahmad2, Nagina Ali Hassan1, Hiroyuki Oku3 and Gildardo Rivera4 1Department of Chemistry, The Islamia University of Bahawalpur, Bahawalpur, Pakistan 2Institute of Chemical Sciences, Bahauddin Zakariya University, Multan, Pakistan 3Department of Chemistry & Chemical Biology, Gunma University Kiryu, Gunma 376-8515, Japan 4Centro de Biotecnología, Genómica, Instituto Politécnico Nacional, 88710, Reynosa, México Abstract The synthesis of enantioselective β-amino acids is being reported in this review on account of their significant properties as proteinogenic, non-proteinogenic role such as neurotransmitter, biosynthesizer and nutritional supplementing materials etc. They are extensively used as chiral starting materials, auxiliaries and catalysts in organic synthesis. According to literature evidences, extensive research has been carried out to develop the methodologies for the synthesis of stereoselective β-amino acids. In this review, we describe recent advances in synthetic routes of enantioselective β-amino acids derivatives with chemical reactions during the last decades and to provide the most suitable route of their synthesis to compete the future challenges. Keywords: β-amino acids; Enantioselective; Synthesis Phosphoramidite ligand was used to obtain adducts in high yields with up to 94% by Fillion et al. through conjugate addition of dialkylzinc Introduction reagents to 2-aryl acrylate (Scheme 3). Deprotection of adduct, followed Enantionselective synthesis of β-amino acids has gained significant by a Curtius rearrangement of the succinic acid derivative resulted in importance because of their interesting pharmacological applications the formation of β-amino acid derivative [14]. -
Switch Peptide Via Staudinger Reaction Vol
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Infoscience - ÉcoleORGANIC polytechnique fédérale de Lausanne LETTERS 2008 Switch Peptide via Staudinger Reaction Vol. 10, No. 22 5243-5246 Natalia Nepomniaschiy,† Valerie Grimminger,‡ Aviv Cohen,† Saviana DiGiovanni,‡ Hilal A. Lashuel,*,‡ and Ashraf Brik*,† Department of Chemistry, Ben-Gurion UniVersity of the NegeV, P.O. Box 653, Beer SheVa 84105, Israel, and Brain Mind Institute, Ecole Polytechnique Federale de Lausanne (EPFL), 1015 Lausanne, Switzerland hilal.lashuel@epfl.ch; [email protected] Received September 29, 2008 ABSTRACT A new transformation based on the Staudinger reaction is described, and its application in the design of a novel switch element to control peptide folding is demonstrated. We found that the azide switch is activated rapidly in water to promote acyl transfer using tris(2-carboxyethyl)phosphine hydrochloride (TCEP) via the Staudinger reaction. Our findings expand the repertoire of uses of the Staudinger reaction in chemical biology and the number of available triggers for use in switch peptides. The Staudinger reaction, discovered nearly a century ago, While the aza-ylide intermediate is known to be stable in occurs between a phosphine and an azide to form an aza- organic solvents, it tends to hydrolyze rapidly in aqueous ylide.1 This transformation has been exploited in several media to furnish the primary amine and the phosphine oxide reactions of high synthetic importance wherein the aza-ylide products. In the traceless Staudinger ligation, however, the intermediate, with its highly nucleophilic nitrogen atom, reduction of the azide to amine is a competing side reaction, serves to trap various electrophiles.2 Staudinger ligation is thus reversing the capture step and leading to two peptide 4 one example of such reactions, in which an ester moiety is fragments. -
Siteselective Traceless Staudinger Ligation for Glycoprotein Synthesis Reveals Scope and Limitations
DOI: 10.1002/cbic.201100125 Site-Selective Traceless Staudinger Ligation for Glycoprotein Synthesis Reveals Scope and Limitations GonÅalo J. L. Bernardes, Lars Linderoth, Katie J. Doores, Omar Boutureira, and Benjamin G. Davis*[a] Efficient, chemoselective reactions enable access to well-de- al stability towards hydrolases as previously demonstrated for fined post-translationally modified proteins.[1–4] One approach other natural substrates.[32,33] The construction of glycoproteins involves the positioning of a reactive moiety within a side bearing this unnatural motif may also circumvent problems en- chain that may be chemoselectively addressed (a tag-and- countered in chemoenzymatic syntheses of glycoproteins by modify approach).[5] Among functionalities, the azide group using endoglycosidases[34] and provide a linkage more resistant has received attention since it can be installed in biopolymers to hydrolysis than natural Asn-linked glycoconjugates.[35] Our (e.g., by using auxotrophic or non-natural expression as well as strategy is based on a “tag-and-modify” approach[5] and ex- metabolic and enzymatic processes[6,7]) and has been used in ploits the introduction into proteins of Aha[20] (tag) that may installation of post-translational modifications and mimics[8,9] be chemoselectively addressed (modified) using traceless Stau- and/or protein labelling[2–4, 10] in combination with Huisgen cy- dinger conditions mild enough to retain protein activity cloaddition reactions that are CuI catalysed[11,12] (CCHC) or throughout (Scheme 1). strain promoted.[13–16] The Staudinger reaction[17] is another azide-selective reaction that has been used, for example, to modify cell surface carbo- hydrates,[18,19] and to label proteins that contain azidohomoala- nine (Aha).[20] The reaction proceeds by attack of phosphine on azide to form an aza-ylid intermediate (Scheme S1A in the Supporting Information). -
Advanced Studies on the Synthesis of Organophosphorus Compounds
ALMA MATER STUDIORUM UNIVERSITÀ DI BOLOGNA DOTTORATO DI RICERCA IN SCIENZE CHIMICHE (XIX° ciclo) Area 03 Scienze Chimiche-CHIM/06 Chimica Organica Dipartimento di Chimica Organica “A. Mangini” Coordinatore: Chiar.mo Prof. Vincenzo Balzani Advanced Studies on the Synthesis of Organophosphorus Compounds Dissertazione Finale Presentata da: Relatore: Dott. ssa Marzia Mazzacurati Prof. Graziano Baccolini Co-relatore: Dott.ssa Carla Boga INDEX Index: Keywords…………………………………………………………….………….VII Chapter 1…………………………………………………………………………..3 GENERAL INTRODUCTION ON PHOSPHORUS CHEMISTRY 1.1 Organophosphorus Chemistry………………………………………………….4 1.1.1 Phosphines………………………………………………………………..5 1.1.2 Phosphonates……………………………………………………………..6 1.1.3 Phosphites………………………………………………………………...7 1.2 Uses of Organophosphorus Compounds………………………………………..7 1.2.1 Agricultural Application………………………………………………….8 1.2.2 Catalysis……………………………………………………………..…....9 1.2.3 Organophosphorus Conpounds in Medicine…………………………….11 1.2.4 Phosphorus in Biological Compounds…………………………………..12 1.3 References……………………………………………………………………..15 Chapter 2…………………………………………………………………………17 THE HYPERCOORDINATE STATES OF PHOSPHORUS 2.1 The 5-Coordinate State of Phosphorus……………………………………….17 2.2 Pentacoordinated structures and their non rigid character…………………….18 2.3 Permutational isomerization…………………………………………………..19 2.3.1 Berry pseudorotation……………………………………………………20 2.3.2 Turnstile rotation………………………………………………………..21 2.4 The 6-Coordinate State of Phosphorus……………………………………….22 2.5 References…………………………………………………………………......24 I Chapter -
Chapter 5: Phosphine Reactivity Towards Azides in Water: Reduction Versus Hydrolysis
Cover Page The handle http://hdl.handle.net/1887/67530 holds various files of this Leiden University dissertation. Author: Gential, G.P.P. Title: Self adjuvanting immunopeptides : design and synthesis Issue Date: 2018-12-17 Chapter 5: Phosphine reactivity towards azides in water: Reduction versus hydrolysis Published partially: Pawlak J.B., Gential, G. P. P. et al. Bioorthogonal Deprotection on the Dendritic Cell Surface for Chemical Control of Antigen Cross-Presentation Angew.Chem.Int. Ed. 2015, 54,5628 –5631 Introduction In the field of bioorganic synthesis, azides are commonly used as masked functionalities to protect amines. Azides are easily introduced by substitution reactions or can be obtained from amines by diazo transfer. Azides can withstand a variety of reaction conditions and are easily converted into amines by several types of reduction, including the Staudinger reaction1,2. Reaction of an azide with a trialkyl- or triarylphosphine proceeds via an iminophosphorane that upon hydrolysis leads to the corresponding amine (Figure 1). The combination of azide and Staudinger reaction was given a reappraisal by the emergence of bioorthogonal chemistry3. This field of research aims to the selective detection of a specific biomolecule in living or biological systems4. To attain this goal the biomolecule of interest should be provided with a reactive group that is inert in biological systems but selectively reacts with a reporter group under physiological conditions5,6. The azide function is small, relatively stable, abiotic and essentially non-cytotoxic while incorporation of an azide into the biomolecule of interest allows a number of selective reactions with probes such as reporter molecules. -
Recent Advances in Enantioselective Photochemical Reactions of Stabilized Diazo Compounds
molecules Review Recent Advances in Enantioselective Photochemical Reactions of Stabilized Diazo Compounds Ting-Bi Hua, Qing-Qing Yang * and You-Quan Zou y College of Materials and Chemical Engineering, Key Laboratory of Inorganic Nonmetallic Crystalline and Energy Conversion Materials, China Three Gorges University, 8 Daxue Road, Yichang 443002, Hubei, China * Correspondence: [email protected] Current address: Department of Organic Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel. y Received: 3 August 2019; Accepted: 26 August 2019; Published: 2 September 2019 Abstract: Diazo compounds have proven to be a useful class of carbenes or metal carbenoids sources under thermal, photochemical, or metal-catalyzed conditions, which can subsequently undergo a wide range of synthetically important transformations. Recently, asymmetric photocatalysis has provoked increasing research interests, and great advances have been made in this discipline towards the synthesis of optically enriched compounds. In this context, the past two decades have been the most productive period in the developments of enantioselective photochemical reactions of diazo compounds due to a better understanding of the reactivities of diazo compounds and the emergence of new catalytic modes, as well as easier access to and treatment of stabilized diazo compounds. This review highlights these impressive achievements according to the reaction type, and the general mechanisms and stereochemical inductions are briefly discussed as well. Keywords: diazo compounds; enantioselectivity; photocatalysis; Wolff rearrangement 1. Introduction Diazo compounds are a class of charge neutral organic compounds containing a diazo group bound to a carbon atom, which can resonance into different structures (Figure1a) [ 1]. Since its chemistry has existed for more than a century [2], diazo compounds have been rendered to be versatile building blocks and will continue to play an important role in organic synthesis. -
Enantioselective Organocatalytic Cycloaddition Reactions Between Enolisable Anhydrides and Imines
Enantioselective organocatalytic cycloaddition reactions between enolisable anhydrides and imines Trinity College Dublin A thesis submitted to the University of Dublin for the degree of Doctor of Philosophy by Aarón Gutiérrez Collar, Under the supervision of Prof. Stephen Connon February 2019 Declaration I declare that this thesis has not been submitted as an exercise for a degree at this or any other university and it is entirely my own work. Due ackowledegments and references are given to the work of others I agree to deposit this thesis in the University’s open access institutional repository or allow the library to do so on my behalf, subject to Irish Copyright Legislation and Trinity College Library conditions of use and acknowledgement. Aarón Gutiérrez Collar S. A. Cronin, A. Gutiérrez Collar, S. Gundala, C. Cornaggia, E. Torrente, F. Manoni, A. Botte, B. Twamley and S. J. Connon, Org. Biomol. Chem., 2016, 14, 6955. A. Gutiérrez Collar, C. Trujillo and S. J. Connon, Chem. Eur. J., Accepted Introduction ..................................................................................................................... 1 1.1 Lactams ............................................................................................................... 1 1.1.1 Biological and medicinal relevance ...................................................................... 1 1.1.2 Principal methods of synthesis and associated challenges .................................... 2 1.1.2.1 Beckmann rearrangement ...................................................................................