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Islands in the Stream 2002: Exploring Underwater Oases
Islands in the Stream 2002: Exploring Underwater Oases NOAA: Office of Ocean Exploration Mission Three: SUMMARY Discovery of New Resources with Pharmaceutical Potential (Pharmaceutical Discovery) Exploration of Vision and Bioluminescence in Deep-sea Benthos (Vision and Bioluminescence) Microscopic view of a Pachastrellidae sponge (front) and an example of benthic bioluminescence (back). August 16 - August 31, 2002 Shirley Pomponi, Co-Chief Scientist Tammy Frank, Co-Chief Scientist John Reed, Co-Chief Scientist Edie Widder, Co-Chief Scientist Pharmaceutical Discovery Vision and Bioluminescence Harbor Branch Oceanographic Institution Harbor Branch Oceanographic Institution ABSTRACT Harbor Branch Oceanographic Institution (HBOI) scientists continued their cutting-edge exploration searching for untapped sources of new drugs, examining the visual physiology of deep-sea benthos and characterizing the habitat in the South Atlantic Bight aboard the R/V Seaward Johnson from August 16-31, 2002. Over a half-dozen new species of sponges were recorded, which may provide scientists with information leading to the development of compounds used to study, treat, or diagnose human diseases. In addition, wondrous examples of bioluminescence and emission spectra were recorded, providing scientists with more data to help them understand how benthic organisms visualize their environment. New and creative Table of Contents ways to outreach and educate the public also Key Findings and Outcomes................................2 Rationale and Objectives ....................................4 -
An Open-Source Web Platform to Share Multisource, Multisensor Geospatial Data and Measurements of Ground Deformation in Mountain Areas
International Journal of Geo-Information Article An Open-Source Web Platform to Share Multisource, Multisensor Geospatial Data and Measurements of Ground Deformation in Mountain Areas Martina Cignetti 1,2, Diego Guenzi 1,* , Francesca Ardizzone 3 , Paolo Allasia 1 and Daniele Giordan 1 1 National Research Council of Italy, Research Institute of Geo-Hydrological Protection (CNR IRPI), Strada delle Cacce 73, 10135 Turin, Italy; [email protected] (M.C.); [email protected] (P.A.); [email protected] (D.G.) 2 Department of Earth Sciences, University of Pavia, 27100 Pavia, Italy 3 National Research Council of Italy, Research Institute of Geo-Hydrological Protection (CNR IRPI), Via della Madonna Alta 126, 06128 Perugia, Italy; [email protected] * Correspondence: [email protected] Received: 20 November 2019; Accepted: 16 December 2019; Published: 18 December 2019 Abstract: Nowadays, the increasing demand to collect, manage and share archives of data supporting geo-hydrological processes investigations requires the development of spatial data infrastructure able to store geospatial data and ground deformation measurements, also considering multisource and heterogeneous data. We exploited the GeoNetwork open-source software to simultaneously organize in-situ measurements and radar sensor observations, collected in the framework of the HAMMER project study areas, all located in high mountain regions distributed in the Alpines, Apennines, Pyrenees and Andes mountain chains, mainly focusing on active landslides. Taking advantage of this free and internationally recognized platform based on standard protocols, we present a valuable instrument to manage data and metadata, both in-situ surface measurements, typically acquired at local scale for short periods (e.g., during emergency), and satellite observations, usually exploited for regional scale analysis of surface displacement. -
Ecological Characterization of Bioluminescence in Mangrove Lagoon, Salt River Bay, St. Croix, USVI
Ecological Characterization of Bioluminescence in Mangrove Lagoon, Salt River Bay, St. Croix, USVI James L. Pinckney (PI)* Dianne I. Greenfield Claudia Benitez-Nelson Richard Long Michelle Zimberlin University of South Carolina Chad S. Lane Paula Reidhaar Carmelo Tomas University of North Carolina - Wilmington Bernard Castillo Kynoch Reale-Munroe Marcia Taylor University of the Virgin Islands David Goldstein Zandy Hillis-Starr National Park Service, Salt River Bay NHP & EP 01 January 2013 – 31 December 2013 Duration: 1 year * Contact Information Marine Science Program and Department of Biological Sciences University of South Carolina Columbia, SC 29208 (803) 777-7133 phone (803) 777-4002 fax [email protected] email 1 TABLE OF CONTENTS INTRODUCTION ............................................................................................................................................... 4 BACKGROUND: BIOLUMINESCENT DINOFLAGELLATES IN CARIBBEAN WATERS ............................................... 9 PROJECT OBJECTIVES ..................................................................................................................................... 19 OBJECTIVE I. CONFIRM THE IDENTIY OF THE BIOLUMINESCENT DINOFLAGELLATE(S) AND DOMINANT PHYTOPLANKTON SPECIES IN MANGROVE LAGOON ........................................................................ 22 OBJECTIVE II. COLLECT MEASUREMENTS OF BASIC WATER QUALITY PARAMETERS (E.G., TEMPERATURE, SALINITY, DISSOLVED O2, TURBIDITY, PH, IRRADIANCE, DISSOLVED NUTRIENTS) FOR CORRELATION WITH PHYTOPLANKTON -
Eutrophication Assessment of the Kelegeri Lake Using Gis Technique
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 06 Issue: 07 | July 2019 www.irjet.net p-ISSN: 2395-0072 EUTROPHICATION ASSESSMENT OF THE KELEGERI LAKE USING GIS TECHNIQUE PREETI JAMBAGI1, Dr. S. SURESH2 1Post Graduate in Environmental Engineering, BIET College Davanagere 577004 Karnataka, India 2Associate Professor, M.tech Environmental Engineering College Davanagere 577004 Karnataka, India ---------------------------------------------------------------------***---------------------------------------------------------------------- Abstract - Water is one of the most precious resources trophic state index by identifying the physico-chemical necessary for the survival of all living organisms. Due to rapid characteristics of the lake water and estimation of rate of use of chemicals and fertilizers in agricultural, discharge of eutrophication along with creation of spatial variations using sewage and domestic activities in and around the lake Geographic Information System technique. decreases the water quality of lake. The study was carried out on the assessment of trophic state of Kelegeri Lake by using 1.1 SCOPE OF PRESENT STUDY GIS technique. A representation of the spatial distribution was developed using inverse distance weighted interpolation The water is the most fundamental element of all living method. The eutrophication level of the lake was determined organisms. Due to reckless use of chemicals in the with the help of Carlson’s scale. Based on trophic state index agricultural fields and in daily activities. Phosphorous and calculations and spatial distribution by Geographic nitrogen is the main chemical responsible for the water information system technique. The lake was found to be in quality degradation. So the study of some of the physico – oligotrophic condition in February and April, mesotrophic chemical parameters of the lake to consider whether this can condition in March. -
Monitoring and Predicting Eutrophication of Inland Waters Using Remote Sensing
Monitoring and Predicting Eutrophication of Inland Waters Using Remote Sensing Shabani Marijani Mssanzya February, 2010 Monitoring and Predicting Eutrophication of Inland Waters Using Remote Sensing by Shabani Marijani Mssanzya Thesis submitted to the International Institute for Geo-information Science and Earth Observation in partial fulfilment of the requirements for the degree of Master of Science in Geo-information Science and Earth Observation, Specialisation: Environmental Hydrology Thesis Assessment Board Chairman: Prof. Dr. Ing. Wouter Verhoef (ITC) External Examiner: Dr. M. A. Eleveld (Free University- Amsterdam) First Supervisor: Dr. Ir. Mhd. Suhyb Salama (ITC) Second Supervisor: Dr. Ir. Chris M. Mannaerts (ITC) Advisor: Ms. Wiwin Ambarwulan (ITC) INTERNATIONAL INSTITUTE FOR GEO-INFORMATION SCIENCE AND EARTH OBSERVATION ENSCHEDE, THE NETHERLANDS Disclaimer This document describes work undertaken as part of a programme of study at the International Institute for Geo-information Science and Earth Observation. All views and opinions expressed therein remain the sole responsibility of the author, and do not necessarily represent those of the institute. Abstract Inland waters are human kind assets as they serve for both economical and ecological well being; however, their existence is compromised by raising eutrophication in these water bodies’ especially toxic cyanobacteria species. Existing in-situ water quality measurements have failed to offer required temporal and spatial coverage which cope with the dynamics of water quality. Therefore, the purpose of this thesis was to use remote sensing techniques to monitor and predict eutrophication with the focus on separating cyanobacteria from other Phytoplankton species. Eutrophication in water bodies is associated with growth of Phytoplankton biomass which is easily to be detected by satellite sensors. -
Estimation of the Impact of Trophic Interactions on Biological Production Functions in an Ecosystem
Size dependency in Marine and Freshwater Ecosystems ICES CM 2003/N:11 Estimation of the impact of trophic interactions on biological production functions in an ecosystem. Emmanuel Chassot and Didier Gascuel Abstract A simulation model is developed in order to estimate the impact of trophic interspecific relations on the biological production functions of an ecosystem. Exploitable biomass of a theoretical ecosystem is allocated by trophic class, each class including all the species and organisms of a given range of trophic levels. These species and organisms are given individual growth, recruitment and survival models. Biomass and yields per recruit models based on the usual approach of Beverton and Holt are thus estimated by trophic class for different theoretical levels of fishing mortality. The parameters of the growth and survival models are estimated to define a coherent biological production function for each trophic class. A recruitment term is also introduced for each class in order to get a biomass distribution in the ecosystem similar to different biomass trophic spectra pre-determined. The natural mortality encountered by each trophic class is supposed to include a term of mortality dependent on the predators biomass and a term of residual mortality considered constant. Predation is based on a function of trophic preference between the classes. We show that trophic interactions existing in an ecosystem affect the biological production functions according to the trophic class considered within the food web. Low trophic levels functions are highly variable according to the level of top-down control considered and the shape of the virgin spectrum. High trophic levels functions display low variations because their biomass is generally low and they are poorly subjected to predation. -
Implementing Data Share Policy Final
Implementing Data Share Through Open Source Portal Platforms presented by Bo Guo, PE, PhD and Kathy O’Donnell of Gistic Research, Inc and Scott Andreasen of Parsons Brinckerhoff Spatial Data Infrastructure (SDI) An SDI is to acquire, process, distribute, use, maintain, and preserve spatial data through Technology Policies Standards Human Resources, and related activities necessary A geospatial data portal is an important part of an SDI Tale of Two Portals Geoportal Discussion of GOS 2 Esri Opensource GOS Initiative performance & Geoportal scalability GOS implementation GOS retires with Geoportal Toolkit Merged with data.gov as geo.data.gov Version 2 GeoNetwork FAO + UNEP Multiple metadata standards started Harvesting development Initial release as FOSS 2001 2003 2006 2009 2012 Outline AGIC Data Sharing Guidelines Data Sharing Models and Web Portals Esri’s Geoportal Server OpenSource GeoNetwork Opensource Conclusion Arizona Data Sharing Guidelines “A Blueprint for Geospatial Data Sharing Policy in Arizona” Developed by AGIC Administration & Legal Committee Currently under review – discussed fully in next session! Provides guide to data sharing best practices Conforms to ARS provisions for data sharing No written agreement necessary between agencies – okay to share if you’re custodian Sharing agency retains custodial ownership of data Okay to prohibit redistribution of data, if desired Okay to exempt from commercial fees Sharing agency not liable for data errors Arizona Data Sharing Guidelines Arizona portal should -
Remote Sensing of Coastal Upwelling in the South-Eastern Baltic Sea: Statistical Properties and Implications for the Coastal Environment
Article Remote Sensing of Coastal Upwelling in the South-Eastern Baltic Sea: Statistical Properties and Implications for the Coastal Environment Toma Dabuleviciene 1,2,*, Igor E. Kozlov 1,2,3, Diana Vaiciute 1,2 and Inga Dailidiene 1 1 Natural Sciences Department, Klaipeda University, Herkaus Manto str. 84, LT-92294, Klaipeda, Lithuania; [email protected] (I.E.K.); [email protected] (D.V.); [email protected] (I.D.) 2 Marine Research Institute, Klaipeda University, Universiteto ave. 17, LT-92294, Klaipeda, Lithuania 3 Satellite Oceanography Laboratory, Russian State Hydrometeorological University, Malookhtinsky Prosp., 98, 195196 Saint Petersburg, Russia * Correspondence: [email protected]; Tel.: +370-6516-1459 Received: 14 September 2018; Accepted: 3 November 2018; Published: 6 November 2018 Abstract: A detailed study of wind-induced coastal upwelling (CU) in the south-eastern Baltic Sea is presented based on an analysis of multi-mission satellite data. Analysis of moderate resolution imaging spectroradiometer (MODIS) sea surface temperature (SST) maps acquired between April and September of 2000–2015 allowed for the identification of 69 CU events. The Ekman-based upwelling index (UI) was applied to evaluate the effectiveness of the satellite measurements for upwelling detection. It was found that satellite data enable the identification of 87% of UI-based upwelling events during May–August, hence, serving as an effective tool for CU detection in the Baltic Sea under relatively cloud-free summer conditions. It was also shown that upwelling-induced SST drops, and its spatial properties are larger than previously registered. During extreme upwelling events, an SST drop might reach 14 °C, covering a total area of nearly 16,000 km2. -
Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf Peter J
University of South Florida Scholar Commons Marine Science Faculty Publications College of Marine Science 1-2016 Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf Peter J. Rubec Florida Fish and Wildlife Conservation Commission Jesse Lewis Florida Fish and Wildlife Conservation Commission David Reed Florida Fish and Wildlife Conservation Commission Christi Santi Florida Fish and Wildlife Conservation Commission Robert H. Weisberg University of South Florida See next page for additional authors Follow this and additional works at: https://scholarcommons.usf.edu/msc_facpub Part of the Marine Biology Commons Scholar Commons Citation Rubec, Peter J.; Lewis, Jesse; Reed, David; Santi, Christi; Weisberg, Robert H.; Zheng, Lianyuan; Jenkins, Chris; Ashbaugh, Charles F.; Lashley, Curt; and Versaggi, Salvatore, "Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf" (2016). Marine Science Faculty Publications. 257. https://scholarcommons.usf.edu/msc_facpub/257 This Article is brought to you for free and open access by the College of Marine Science at Scholar Commons. It has been accepted for inclusion in Marine Science Faculty Publications by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Authors Peter J. Rubec, Jesse Lewis, David Reed, Christi Santi, Robert H. Weisberg, Lianyuan Zheng, Chris Jenkins, Charles F. Ashbaugh, Curt Lashley, and Salvatore Versaggi This article is available at Scholar Commons: https://scholarcommons.usf.edu/msc_facpub/257 Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:160–176, 2016 Published with license by the American Fisheries Society ISSN: 1942-5120 online DOI: 10.1080/19425120.2015.1082519 SPECIAL SECTION: SPATIAL ANALYSIS, MAPPING, AND MANAGEMENT OF MARINE FISHERIES Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf Peter J. -
Pacific Currents, Fall 2020
FALL 2020 BIOLUMINESCENCEBIOLUMINESCENCE IN THE OCEAN Focus on Sustainability Dr. Peter Kareiva Joins Aquarium as New President and CEO THE AQUARIUM WELCOMED DR. PETER KAREIVA as its new president and CEO on August 1, 2020. Dr. Jerry R. Schubel retired from the position on July 31, 2020. Dr. Kareiva comes to the Aquarium from his position as direc- tor of the Institute of the Environment and Sustainability at UCLA. Prior to UCLA, Dr. Kareiva led a research group at the Northwest Fisheries Science Center in the National Oceanic and Atmospheric Administration, served as the vice president of science for The Nature Conservancy, and taught at several universities, including Brown University, University of Washington, Stanford University, and the Swedish University of Agricultural Sciences. He holds a bachelor’s degree in zoology from Duke University and a Ph.D. in ecology and evolutionary biology from Cornell University. His ANDREW REITSMA ANDREW awards and appointments include a Guggenheim Fellowship, a Fellow Dr. Peter Kareiva has presented lectures at the Aquarium, served of the American Academy of Arts and Sciences, and the Aquarium’s on the science advisory panel for Pacific Visions, and was the Aquarium's 2017 Ocean Conservation Award honoree. Ocean Conservation Award. He is also a member of the National Academy of Sciences. Previously Dr. Kareiva served as director of the Institute of the Environment and Sustainability at UCLA and vice president of science at The Nature Conservancy. Dr. Kareiva has authored three books and over 200 research ar- ticles. His eclectic research has touched on everything from genetically engineered microbes, to wildebeest, to evidence of racism in conserva- tion’s origins. -
Developing a Free and Open Source Software Based Spatial Data Infrastructure
Developing a Free and Open Source Software based Spatial Data Infrastructure Jeroen Ticheler 1 License This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 2.5 License. To view a copy of this license, visit http:// creativecommons.org/licenses/by-nc-sa/2.5/ or send a letter to Creative Commons, 543 Howard Street, 5th Floor, San Francisco, California, 94105, USA. 2 The acronyms ☺ OGC - Open Geospatial Consortium ISO - International Standards Organization SDI - Spatial Data Infrastructure FOSS - Free and Open Source Software GEOFOSS - GeoSpatial FOSS ;-) 3 I’ll only use five acronyms in the presentation, so we’ll say them out loud together starting really easy! Overview What is Free and Open Source Software? Complexity of a Spatial Data Infrastructure Some examples Expert communities The future 4 What is Free and Open Source Software? 5 What is Software? Instructions that make hardware work Programmers write scripts that can be understood by people and by compilers: the source code Compiled software can not be fixed or adapted to user needs 6 What is Software? A key property is that it can be infinitely copied without any loss 7 What is FOSS? FOSS provides access to the source code of an application You are Free to use software and modify the source code to suit your needs 8 Source code is often the most secret property of a company What is FOSS? FOSS Closed Source The most prominent examples 9 Some of the most prominent examples of Open Source versus Commercial software: Linux vs Windows Mozilla Firefox vs -
Establishing a CSW Metadata Catalogue with Geonetwork Opensource
NETMAR Deliverable D7.9.2: ICAN semantic interoperability cookbooks – Part 3 International Coastal Atlas Network Cookbook: Establishing a CSW metadata catalogue with GeoNetwork opensource © 2012 NETMAR Consortium 1 EC FP7 Project No. 249024 NETMAR Deliverable D7.9.2: ICAN semantic interoperability cookbooks – Part 3 Table of Contents Introduction............................................................................................................................................3 What is a metadata catalogue? ...........................................................................................................3 What is CSW?.......................................................................................................................................3 CSW Application Profiles .....................................................................................................................3 CSW Servers.........................................................................................................................................4 Installing and configuring GeoNetwork 2.6.4......................................................................................5 Installing GeoNetwork 2.6.4.............................................................................................................5 Configuring the database for GeoNetwork 2.6.4............................................................................6 Configure GeoNetwork for Tomcat (optional).................................................................................8