2-DIMENSIONAL INTERCALATED CYANO-METALLATE COMPLEXES- APPROACH to ULTRAFILTRATION by Babatunde Mattew Adebiyi, B.S., M.S. a Diss
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Crystallography of Representative Mofs Based on Pillared Cyanonickelate (PICNIC) Architecture
crystals Article Crystallography of Representative MOFs Based on Pillared Cyanonickelate (PICNIC) Architecture Winnie Wong-Ng 1,*, Jeffrey T. Culp 2,3 and Yu-Sheng Chen 4 1 Materials Measurement Science Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA 2 National Energy Technology Laboratory, United States Department of Energy, P.O. Box 10940, Pittsburgh, PA 15236, USA; [email protected] 3 AECOM, South Park, PA 15219, USA 4 ChemMatCARS, University of Chicago, Argonne, IL 60439, USA; [email protected] * Correspondence: [email protected] Academic Editor: Helmut Cölfen Received: 2 July 2016; Accepted: 22 August 2016; Published: 5 September 2016 Abstract: The pillared layer motif is a commonly used route to porous coordination polymers or metal organic frameworks (MOFs). Materials based on the pillared cyano-bridged architecture, [Ni’(L)Ni(CN)4]n (L = pillar organic ligands), also known as PICNICs, have been shown to be especially diverse where pore size and pore functionality can be varied by the choice of pillar organic ligand. In addition, a number of PICNICs form soft porous structures that show reversible structure transitions during the adsorption and desorption of guests. The structural flexibility in these materials can be affected by relatively minor differences in ligand design, and the physical driving force for variations in host-guest behavior in these materials is still not known. One key to understanding this diversity is a detailed investigation of the crystal structures of both rigid and flexible PICNIC derivatives. This article gives a brief review of flexible MOFs. It also reports the crystal structures of five PICNICS from our laboratories including three 3-D porous frameworks (Ni-Bpene, NI-BpyMe, Ni-BpyNH2), one 2-D layer (Ni-Bpy), and one 1-D chain (Ni-Naph) compound. -
The Biological Inorganic Chemistry of Zinc Ions*
Archives of Biochemistry and Biophysics xxx (2016) 1e17 Contents lists available at ScienceDirect Archives of Biochemistry and Biophysics journal homepage: www.elsevier.com/locate/yabbi The biological inorganic chemistry of zinc ions* * Artur Kre˛zel_ a, Wolfgang Maret b, a Laboratory of Chemical Biology, Faculty of Biotechnology, University of Wroclaw, Joliot-Curie 14A, 50-383 Wroclaw, Poland b King's College London, Metal Metabolism Group, Division of Diabetes and Nutritional Sciences, Department of Biochemistry, Faculty of Life Sciencesof Medicine, 150 Stamford Street, London, SE1 9NH, UK article info abstract Article history: The solution and complexation chemistry of zinc ions is the basis for zinc biology. In living organisms, Received 5 February 2016 zinc is redox-inert and has only one valence state: Zn(II). Its coordination environment in proteins is Received in revised form limited by oxygen, nitrogen, and sulfur donors from the side chains of a few amino acids. In an estimated 14 April 2016 10% of all human proteins, zinc has a catalytic or structural function and remains bound during the Accepted 20 April 2016 lifetime of the protein. However, in other proteins zinc ions bind reversibly with dissociation and as- Available online xxx sociation rates commensurate with the requirements in regulation, transport, transfer, sensing, signal- ling, and storage. In contrast to the extensive knowledge about zinc proteins, the coordination chemistry Keywords: “ ” zinc of the mobile zinc ions in these processes, i.e. when not bound to -
Thioether Coordination Chemistry for Molecular Imaging of Copper in Biological Systems
Review DOI:10.1002/ijch.201600023 Thioether Coordination Chemistry for Molecular Imaging of Copper in Biological Systems Karla M. Ramos-Torres,[a] Safacan Kolemen,[a] and Christopher J. Chang*[a, b, c] We dedicate this submission to Harry Gray,who has beenateacher,mentor,friend, and inspiration to us all. Abstract:Copper is an essentialelement in biological sys- ular imaging agents for this metal, drawing inspirationfrom tems. Its potent redox activity renders it necessary for life, both biological binding motifsand synthetic model com- but at the same time, misregulationofits cellular pools can plexes that reveal thioether coordination as ageneral design lead to oxidative stress implicated in aging and various dis- strategy for selective andsensitive copper recognition. In ease states. Copper is commonly thought of as astatic co- this review,wesummarize some contributions,primarily factor buried in protein active sites;however,evidence of from our own laboratory,onfluorescence- and magnetic res- amore loosely bound, labile pool of copper has emerged. onance-based molecular-imaging probes for studying To help identify and understand new roles for dynamic copper in living systemsusingthioether coordination copper pools in biology,wehave developed selective molec- chemistry. Keywords: copper · fluorescent probes · molecular imaging · MR probes · thioether coordination 1. Introduction Copper is an essential element for life.[1] Owing to its as lipolysis,[20] and the activation of the mitogen-activated potent redox activity,the participationofthis -
Biological Treatment of Cyanide by Using Klebsiella Pneumoniae Species
450 N.H. AVCIOGLU and I. SEYIS BILKAY: Cyanide Removal with K. pneumoniae, Food Technol. Biotechnol. 54 (4) 450–454 (2016) ISSN 1330-9862 original scientifi c paper doi: 10.17113/ft b.54.04.16.4518 Biological Treatment of Cyanide by Using Klebsiella pneumoniae Species Nermin Hande Avcioglu* and Isil Seyis Bilkay Hacett epe University, Faculty of Science, Department of Biology (Biotechnology), Beytepe, TR-06800 Ankara, Turkey Received: November 8, 2015 Accepted: May 13, 2016 Summary In this study, optimization conditions for cyanide biodegradation by Klebsiella pneu- moniae strain were determined to be 25 °C, pH=7 and 150 rpm at the concentration of 0.5 mM potassium cyanide in the medium. Additionally, it was found that K. pneumoniae strain is not only able to degrade potassium cyanide, but also to degrade potassium hexacyano- ferrate(II) trihydrate and sodium ferrocyanide decahydrate with the effi ciencies of 85 and 87.5 %, respectively. Furthermore, this strain degraded potassium cyanide in the presence of diff erent ions such as magnesium, nickel, cobalt, iron, chromium, arsenic and zinc, in variable concentrations (0.1, 0.25 and 0.5 mM) and as a result the amount of the bacteria in the biodegradation media decreased with the increase of ion concentration. Lastly, it was also observed that sterile crude extract of K. pneumoniae strain degraded potassium cya- nide on the fi ft h day of incubation. Based on these results, it is concluded that both culture and sterile crude extract of K. pnemoniae will be used in cyanide removal from diff erent wastes. Key words: Klebsiella pneumoniae, cyanide, biodegradation Introduction alcaligenes (6), Pseudomonas putida (1), Agrobac terium tume- Untreated effl uents of industrial processes are mainly faciens (9), Klebsiella oxytoca (3), Bacillus pumilus (10), Fu- responsible for environmental pollution with various sarium oxysporum (11), Rhizopus oryzae (12) and Trichoderma forms of toxic substances, especially free cyanides and sp. -
Inorganic Chemistry (04 Credits)
Course No: CH14101CR Title: Inorganic Chemistry (04 Credits) Max. Marks: 100 Duration: 64 Contact hours External Exam: 80 Marks. Internal Assessment: 20 Marks Unit-I: Stereochemistry and Bonding in the Compounds of Main Group Elements. (16 Contact hours) Valence bond theory- Energy changes taking place during the formation of diatomic molecules; factors affecting the combined wave function. Bent's rule and energetics of hybridization. Resonance: Conditions, Resonance energy and examples of some inorganic molecules/ions. Odd electron bonds: Types, properties and molecular orbital treatment. VSEPR: Recapitulation of assumptions; Shapes of Trigonal bypyramidal, Octahedral and -1 2- 2- Pentagonal bipyramidal molecules / ions. (PCl5, VO3 , SF6, [SiF6] , [PbCl6] and IF7). Limitations of VSEPR theory. Molecular orbital theory- Salient features, Variation of electron density with internuclear distance. Relative order of energy levels and molecular orbital diagrams of some heterodiatomic molecules /ions. Molecular orbital diagram of Polyatomic molecules / ions. Walsh diagrams (Concept only). Delocalized molecular orbitals:- Butadiene, cyclopentadiene and benzene. Detections of Hydrogen bond: UV – Vis ; IR and X-ray ; Importance of hydrogen bonding. Unit-II: Bonding in Coordination Compounds and Metal Clusters: (16 Contact hours) Structural (ionic radii) and thermodynamic (hydration and lattice energies) effects of crystal field splitting. Jahn -Teller distortion, spectrochemical series and the nephleuxetic effect. Evidence of covalent bonding in transition metal complexes; Adjusted crystal field theory. Molecular orbital theory of bonding in octahedral complexes:- composition of ligand group orbitals;molecular orbitals and energy level diagram for sigma bonded ML6; Effect of pi- bonding. Molecular orbital and energy level diagram for Square-planar and Tetrahedral complexes. Metal Clusters: Introduction to metal clusters; Dinuclear species ; Metal –metal multiple bonds. -
The Light Triggered Dissolution of Gold Wires Using Potassium Ferrocyanide T Solutions Enables Cumulative Illumination Sensing ⁎ Weida D
Sensors & Actuators: B. Chemical 282 (2019) 52–59 Contents lists available at ScienceDirect Sensors and Actuators B: Chemical journal homepage: www.elsevier.com/locate/snb The light triggered dissolution of gold wires using potassium ferrocyanide T solutions enables cumulative illumination sensing ⁎ Weida D. Chena, Seung-Kyun Kangb, Wendelin J. Starka, John A. Rogersc,d,e, Robert N. Grassa, a Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1, 8093 Zurich, Switzerland b Department of Bio and Brain Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 334141, Republic of Korea c Departments of Materials Science and Engineering, Biomedical Engineering, Neurological Surgery, Chemistry, Mechanical Engineering, Electrical Engineering and Computer Science, Northwestern University, Evanston, IL 60208, USA d Center for Bio-Integrated Electronics, Northwestern University, Evanston, IL 60208, USA e Simpson Querrey Institute for Nano/Biotechnology, Northwestern University, Evanston, IL 60208, USA ARTICLE INFO ABSTRACT Keywords: Electronic systems with on-demand dissolution or destruction capabilities offer unusual opportunities in hard- Photochemistry ware-oriented security devices, advanced military spying and controlled biological treatment. Here, the dis- Cyanide solution chemistry of gold, generally known as inert metal, in potassium ferricyanide and potassium ferrocya- Sensor nide solutions has been investigated upon light exposure. While a pure aqueous solution of potassium Conductors ferricyanide–K3[Fe(CN)6] does not dissolve gold, an aqueous solution of potassium ferrocyanide–K4[Fe(CN)6] Diffusion limitation irradiated with ambient light is able to completely dissolve a gold electrode within several minutes. Photo Devices activation and dissolution kinetics were assessed at different initial pH values, light irradiation intensities and ferrocyanide concentrations. -
Characterization of DNA Damaging Intermediates by EPR
Chromium Carcinogenesis: Characterization of DNA damaging Intermediates by EPR 31P NMR, HPLC, ESI-MS and Magnetic Susceptibility A dissertation presented to the faculty of the College of Arts and Sciences of Ohio University In partial fulfillment of the requirements for the degree Doctor of Philosophy Roberto Marín Córdoba March 2010 2 This dissertation titled Chromium Carcinogenesis: Characterization of DNA damaging Intermediates by EPR 31P NMR, HPLC, ESI-MS and Magnetic Susceptibility by ROBERTO MARÍN CÓRDOBA has been approved for the Department of Chemistry and Biochemistry and the College of Arts and Sciences by Rathindra N. Bose Professor of Chemistry and Biochemistry Benjamin M. Ogles Dean, College of Arts and Sciences 3 ABSTRACT MARÍN CÓRDOBA, ROBERTO, Ph.D., March 2010, Chemistry and Biochemistry Chromium Carcinogenesis: Characterization of DNA damaging Intermediates by EPR 31P NMR, HPLC, ESI-MS and Magnetic Susceptibility (150 pp.) Director of Dissertation: Rathindra N. Bose The hydrolytic cleavage and oxidative degradation mechanisms of dGDP by the oxochromate-(V) complexes bis(2-ethyl-2-hydroxybutanoato)oxochromate(V) (I) and bis(hydroxyethyl)-amino-tris((hydroxymethyl)methane)oxochromate(V) (II) in the presence of H2O2 were investigated at neutral pH. The products of the reactions were separated and characterized by chromatographic and spectroscopic methods. The oxidative degradation is supported by the detection of free G, furfural, phosphoglycolate, pyrophosphate, guaninepropenal, 8OHdG and guanidinohydantoin. These products are formed through two parallel mechanisms that start with a common Cr-dGDP intermediate in which the oxochromate binds the α phosphate moiety followed by abstraction of H from C4’ and C5’ from the ribose. The detection of inorganic phosphate and dGMP suggests that when the oxometal binds the β phosphate it mainly promotes hydrolytic cleavage of the phosphate diester bond. -
In Partial Fulfullment of the Requirements for the Degree Of
DETERMINATION OF LOW LEVEL HYDROCYANIC ACID IN SOLUTION USING GAS-LIQUID CHROMATOGRAPHY by CARL RUDOLPH SCHNEIDER A THESIS submitted to OREGON STATE UNIVERSITY in partial fulfullment of the requirements for the degree of DOCTOR OP PHILOSOPHY June 1962 APPROVED: Redacted for privacy mmm>*m Professor of/Chemistry In Charge of Major Redacted for privacy • ij Chairman of Departmentof Chemistry Redacted for privacy Chairman of ^ienool Graduate Committee' Redacted for privacy Dean of Graduate School-' Date thesis is presented /•hr- Typed by Linda S. Walker ACKNOWLEDGMENT I wish to express my sincere gratitude to Dr. Harry Preund for his advice and encouragement during the investigations described in this thesis. TABLE OF CONTENTS Page INTRODUCTION ...,....,,,...*... 1 THEORY AND DISCUSSION 1 APPROACH TO THE PROBLEM 14 EXPERIMENTAL , 34 Apparatus for Distribution and Concentration • . ..... 34 Apparatus for Readout ........... 41 Preparation of Standards ......... 43 Procedure for Distribution and Concentration 44 Procedure for Readout 46 Standard Curves and Determination of Concentration Efficiency 47 Effect of Ionic Strength 53 Determination of Hydrogen Cyanide in Air . 55 RESULTS AND DISCUSSION 63 Correction For HCN Loss 63 Analysis of Synthetic Unknowns 63 Interferences 65 Application to Metal-Cyanide Systems .... 66 Unknowns 71 CONCLUSIONS 72 BIBLIOGRAPHY 75 APPENDIX 78 LIST OF FIGURES Figure Page I 15 II 25 III 35 IV 36 V 38 VI 39 VII 40 VIII 42 IX . 48 X 49 XI 73 XII 89 XIII 13-5 LIST OF TABLES Table Page I 19 II 20 III 33 IV 50 V 52 VI 54 VII 58 VIII 61 IX 64 X 67 XI 69 XII 70 XIII 74 DETERMINATION OF LOW LEVEL HYDROCYANIC ACID IN SOLUTION USING GAS-LIQUID CHROMATOGRAPHY INTRODUCTION Doudoroff (8) has presented indirect evidence that the toxicity to fish of systems containing heavy-metal cyanides is due primarily to molecular hydrocyanic acid. -
Transition Metal Complexes of Porphyrin Analogs And
TRANSITION METAL COMPLEXES OF PORPHYRIN ANALOGS AND BORATE-BASED COORDINATION COMPLEXES A Dissertation Presented to The Graduate Faculty of The University of Akron In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Anıl Çetin May, 2007 TRANSITION METAL COMPLEXES OF PORPHYRIN ANALOGS AND BORATE-BASED COORDINATION COMPLEXES Anıl Çetin Dissertation Approved: Accepted: Advisor Department Chair Christopher J. Ziegler Kim C. Calvo Committee Member Dean of the College Claire A. Tessier Ronald F. Levant Committee Member Dean of the Graduate School David A. Modarelli George R. Newkome Committee Member Date Wiley J. Youngs Committee Member Rex D. Ramsier ii ABSTRACT The synthesis of low-coordinate metal ions has been a focus of bioinorganic chemists due to their important roles in active sites in enzymes and protein. Although the isolation of these types of complexes is challenging, porphyrin analogs with one or two carbon atoms in the interior position can be good candidates for generating protected low coordinate metal sites. The metal coordination of one or two carbon substituted hemiporphyrazines, namely monocarbahemiporphyrazine and dicarbahemiporphyrazine, was investigated. These porphyrin analogs, in which one or two of the central metal binding nitrogen atoms were replaced with C-H groups, were synthesized in the early 1950s by Linstead and co-workers, but their metal binding chemistry remained unexplored. Several low coordinate metal complexes of dicarbahemiporphyrazine, namely silver, copper, manganese, iron and cobalt were synthesized. Three different cobalt complexes of monocarbahemiporphyrazine in +2 and +3 oxidation states were also synthesized. Porpholactone is another example of a ring modified porphyrin isomer. In this macrocycle one of the four pyrrollic units is oxidized to an oxazolone ring. -
Pp-03-25-New Dots.Qxd 10/23/02 2:41 PM Page 611
pp-03-25-new dots.qxd 10/23/02 2:41 PM Page 611 NICKEL CARBONATE 611 NICKEL CARBONATE [3333-67-3] Formula: NiCO3; MW 118.72 Two basic carbonates are known. They are 2NiCO3•3Ni(OH)2•4H2O [29863- 10-3], and NiCO3•2Ni(OH)2 [12607-70-4], MW 304.17. The second form occurs in nature as a tetrahydrate, mineral, zaratite. Commercial nickel car- bonate is usually the basic salt, 2NiCO3•3Ni(OH)2•4H2O. Uses Nickel carbonate is used to prepare nickel catalysts and several specialty compounds of nickel. It also is used as a neutralizing agent in nickel plating solutions. Other applications are in coloring glass and in the manufacture of ceramic pigments. Physical Properties NiCO3: Light green rhombohedral crystals; decomposes on heating; practi- cally insoluble in water, 93 mg/L at 25°C; dissolves in acids. 2NiCO3•3Ni(OH)2•4H2O: Light green crystals or brown powder; decom- poses on heating; insoluble in water; decomposes in hot water; soluble in acids and in ammonium salts solutions. Zaratite: Emerald greed cubic crystals; density 2.6 g/cm3; insoluble in water; soluble in ammonia and dilute acids. Thermochemical Properties ∆Ηƒ° (NiCO3) –140.6 kcal/mol Preparation Anhydrous nickel carbonate is produced as a precipitate when calcium car- bonate is heated with a solution of nickel chloride in a sealed tube at 150°C. Alternatively, treating nickel powder with ammonia and carbon dioxide fol- lowed by boiling off ammonia yields pure carbonate. When sodium carbonate is added to a solution of Ni(II) salts, basic nickel carbonate precipitates out in impure form. -
YSI 3682 Zobell Solution
YSI 3682 Zobell Solution YSI Inc. Chemwatch Hazard Alert Code: 2 Version No: 2.2 Issue Date: 09/27/2018 Safety Data Sheet according to OSHA HazCom Standard (2012) requirements Print Date: 09/27/2018 S.GHS.USA.EN SECTION 1 IDENTIFICATION Product Identifier Product name YSI 3682 Zobell Solution Synonyms 061320, 061321, 061322 Other means of identification Not Available Recommended use of the chemical and restrictions on use Relevant identified uses Calibration of analytical instruments / Reagent. Name, address, and telephone number of the chemical manufacturer, importer, or other responsible party Registered company name YSI Inc. Address 1700/1725 Brannum Ln Yellow Springs OH 45387 United States Telephone (937) 767-7241 Fax Not Available Website www.ysi.com Email [email protected] Emergency phone number Association / Organisation CHEMTREC Emergency telephone numbers (800) 424-9300 Other emergency telephone 011 703-527-3887 numbers SECTION 2 HAZARD(S) IDENTIFICATION Classification of the substance or mixture CHEMWATCH HAZARD RATINGS Min Max Flammability 0 Toxicity 2 0 = Minimum Body Contact 2 1 = Low Reactivity 0 2 = Moderate Note: The hazard category numbers found in GHS classification in section 2 of this 3 = High Chronic 2 SDSs are NOT to be used to fill in the NFPA 704 diamond. Blue = Health Red = 4 = Extreme Fire Yellow = Reactivity White = Special (Oxidizer or water reactive substances) CANADIAN WHMIS SYMBOLS Skin Corrosion/Irritation Category 2, Eye Irritation Category 2A, Germ cell mutagenicity Category 2, Specific target organ toxicity - single exposure Classification Category 3 (respiratory tract irritation), Acute Aquatic Hazard Category 2, Chronic Aquatic Hazard Category 3 Label elements Continued.. -
Rapiddistillationless"Free Cyanide"
Reprinted from ENVIRONMENTAL SCIENCE & TECHNOLOGY, Vol. 29, 1995 Copyright @1995 by the American Chemical Society and reprinted by permission of the copyright owner. RapidDistillationless"Free Introduction Cyanide species in the environment originate mainly from Cyanide"Determinationbya a variety of industrial sources such as the electroplating industry, blastfumaces, coke-producing plants, gas works, FlowInjectionLigandExchange etc. However, by far the greatest amount of cyanide- containing wastes are produced by precious metals milling Method operations. Consequently, the safe and economical treat- ment ofmilling wastes is a current problem of great interest. EMIL B. MILOSAVLJEVIC,. Presently available methods for removing andl or destroying LJILJANA SOLUJIC, AND cyanide have been summarized previously (1-3). In order JAMES L. HENDRIX to test the effectiveness and to compare different detoxi- Department of Chemical and Metallurgical Engineering, fication methods, reliable analytical procedures are re- Mackay School of Mines, University of Nevada, quired. The quality ofthe analytical results is very important Reno, Nevada 89557 since capital intensive business decisions related to detoxi- fication and/or stabilization of cyanide-containing wastes must be made. In the first part of this research, extensive species- In a recent final rule (4) the U.S. Environmental dependent cyanide recoveries studies were Protection Agency (EPA) has promulgated maximum contaminant level goals (MCLGs) and/or maximum con- performed using the approved standard methods taminant levels (MCLs) for five inorganic species among available for determination of free cyanide. The data which was cyanide. The Agency accepted the view that a obtained show that serious problems are associated distinction should be made between free cyanides, which with both the CATC (cyanide amenable to are readily bioavailable and extremely toxic, and total chlorination) and WAD (weak and dissociable cyanide) cyanides, which contain all cyanides including those low methods.