Proliferation Pattern During Rostrum Regeneration of the Symbiotic Flatworm Paracatenula Galateia: a Pulse-Chase-Pulse Analysis
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Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
(1104L) Animal Kingdom Part I
(1104L) Animal Kingdom Part I By: Jeffrey Mahr (1104L) Animal Kingdom Part I By: Jeffrey Mahr Online: < http://cnx.org/content/col12086/1.1/ > OpenStax-CNX This selection and arrangement of content as a collection is copyrighted by Jerey Mahr. It is licensed under the Creative Commons Attribution License 4.0 (http://creativecommons.org/licenses/by/4.0/). Collection structure revised: October 17, 2016 PDF generated: October 17, 2016 For copyright and attribution information for the modules contained in this collection, see p. 58. Table of Contents 1 (1104L) Animals introduction ....................................................................1 2 (1104L) Characteristics of Animals ..............................................................3 3 (1104L)The Evolutionary History of the Animal Kingdom ..................................11 4 (1104L) Phylum Porifera ........................................................................23 5 (1104L) Phylum Cnidaria .......................................................................31 6 (1104L) Phylum Rotifera & Phylum Platyhelminthes ........................................45 Glossary .............................................................................................53 Index ................................................................................................56 Attributions .........................................................................................58 iv Available for free at Connexions <http://cnx.org/content/col12086/1.1> Chapter 1 (1104L) Animals introduction1 -
Biological and Chemical Diversity of Bacteria Associated with a Marine Flatworm
Article Biological and Chemical Diversity of Bacteria Associated with a Marine Flatworm Hui-Na Lin 1,2,†, Kai-Ling Wang 1,3,†, Ze-Hong Wu 4,5, Ren-Mao Tian 6, Guo-Zhu Liu 7 and Ying Xu 1,* 1 Shenzhen Key Laboratory of Marine Bioresource & Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China; [email protected] (H.-N.L.); [email protected] (K.-L.W.) 2 School of Life Sciences, Xiamen University, Xiamen 361102, China 3 Key Laboratory of Marine Drugs, Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China 4 The Eighth Affiliated Hospital, Sun Yat-sen University, Shenzhen 518033, China; [email protected] 5 Integrated Chinese and Western Medicine Postdoctoral Research Station, Jinan University, Guangzhou 510632, China 6 Division of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong SAR, China; [email protected] 7 HEC Research and Development Center, HEC Pharm Group, Dongguan 523871, China; [email protected] * Correspondence: [email protected]; Tel.: +86-755-26958849; Fax: +86-755-26534274 † These authors contributed equally to this work. Received: 20 July 2017; Accepted: 29 August 2017; Published: 1 September 2017 Abstract: The aim of this research is to explore the biological and chemical diversity of bacteria associated with a marine flatworm Paraplanocera sp., and to discover the bioactive metabolites from culturable strains. A total of 141 strains of bacteria including 45 strains of actinomycetes and 96 strains of other bacteria were isolated, identified and fermented on a small scale. -
Is the Turbellaria Polyphyletic?
Is the Turbellaria polyphyletic? Julian P. S. Smith, III,' Seth Teyler' & Reinhard M . Rieger2 'Department of Zoology, University of Maine, Orono, ME 04469, USA 2Department of Biology, University of North Carolina, Chapel Hill, NC 27514, USA Keywords: Tirbellaria, phylogenetic systematics, Platyhelminthes, polyphyly, ultrastructure, epidermis, cilia Abstract Within the last two decades, syntheses of both light-microscopic and ultrastructural characters have shown that there are three well-defined monophyletic groups within the Platyhelminthes : 1) the Catenulidale, 2) the Nemertodermatida-Acoela, and 3) the Haplopharyngida-Macrostomida-Polycladida-Neoophora (+ parasit- ic platyhelminth classes) . However, the relationships among these three groups are problematic . The possible apomorphies that would unite them are either not true homologues (i.e. frontal organ), are mutually conflict- ing (i.e. 9+1 axoneme in spermatozoa vs . biflagellate spermatozoa, epidermal ciliary rootlet structure, and protonephridia), or are unrooted with any outgroup and hence untestable or uncertain as apomorphies (pro- tonephridia, mode of epidermal replacement, absence of accessory centrioles on cilia) . The chief obstacle to deciphering the relationships of these groups is the lack of information on them ; presently available infor- mation is insufficient to test potential synapomorphies and insufficient also to allow agreement upon a nar- rowly defined outgroup for the Turbellaria . A view consistent with the present evidence (and admittedly an unsatisfactory -
Dear Author, Here Are the Proofs of Your Article. • You Can Submit Your
Dear Author, Here are the proofs of your article. • You can submit your corrections online, via e-mail or by fax. • For online submission please insert your corrections in the online correction form. Always indicate the line number to which the correction refers. • You can also insert your corrections in the proof PDF and email the annotated PDF. • For fax submission, please ensure that your corrections are clearly legible. Use a fine black pen and write the correction in the margin, not too close to the edge of the page. • Remember to note the journal title, article number, and your name when sending your response via e-mail or fax. • Check the metadata sheet to make sure that the header information, especially author names and the corresponding affiliations are correctly shown. • Check the questions that may have arisen during copy editing and insert your answers/ corrections. • Check that the text is complete and that all figures, tables and their legends are included. Also check the accuracy of special characters, equations, and electronic supplementary material if applicable. If necessary refer to the Edited manuscript. • The publication of inaccurate data such as dosages and units can have serious consequences. Please take particular care that all such details are correct. • Please do not make changes that involve only matters of style. We have generally introduced forms that follow the journal’s style. Substantial changes in content, e.g., new results, corrected values, title and authorship are not allowed without the approval of the responsible editor. In such a case, please contact the Editorial Office and return his/her consent together with the proof. -
Chemosynthetic Symbiont with a Drastically Reduced Genome Serves As Primary Energy Storage in the Marine Flatworm Paracatenula
Chemosynthetic symbiont with a drastically reduced genome serves as primary energy storage in the marine flatworm Paracatenula Oliver Jäcklea, Brandon K. B. Seaha, Målin Tietjena, Nikolaus Leischa, Manuel Liebekea, Manuel Kleinerb,c, Jasmine S. Berga,d, and Harald R. Gruber-Vodickaa,1 aMax Planck Institute for Marine Microbiology, 28359 Bremen, Germany; bDepartment of Geoscience, University of Calgary, AB T2N 1N4, Canada; cDepartment of Plant & Microbial Biology, North Carolina State University, Raleigh, NC 27695; and dInstitut de Minéralogie, Physique des Matériaux et Cosmochimie, Université Pierre et Marie Curie, 75252 Paris Cedex 05, France Edited by Margaret J. McFall-Ngai, University of Hawaii at Manoa, Honolulu, HI, and approved March 1, 2019 (received for review November 7, 2018) Hosts of chemoautotrophic bacteria typically have much higher thrive in both free-living environmental and symbiotic states, it is biomass than their symbionts and consume symbiont cells for difficult to attribute their genomic features to either functions nutrition. In contrast to this, chemoautotrophic Candidatus Riegeria they provide to their host, or traits that are necessary for envi- symbionts in mouthless Paracatenula flatworms comprise up to ronmental survival or to both. half of the biomass of the consortium. Each species of Paracate- The smallest genomes of chemoautotrophic symbionts have nula harbors a specific Ca. Riegeria, and the endosymbionts have been observed for the gammaproteobacterial symbionts of ves- been vertically transmitted for at least 500 million years. Such icomyid clams that are directly transmitted between host genera- prolonged strict vertical transmission leads to streamlining of sym- tions (13, 14). Such strict vertical transmission leads to substantial biont genomes, and the retained physiological capacities reveal and ongoing genome reduction. -
Morphology of Obligate Ectosymbionts Reveals Paralaxus Gen. Nov., a New
bioRxiv preprint doi: https://doi.org/10.1101/728105; this version posted August 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Harald Gruber-Vodicka 2 Max Planck Institute for Marine Microbiology, Celsiusstrasse 1; 28359 Bremen, 3 Germany, +49 421 2028 825, [email protected] 4 5 Morphology of obligate ectosymbionts reveals Paralaxus gen. nov., a 6 new circumtropical genus of marine stilbonematine nematodes 7 8 Florian Scharhauser1*, Judith Zimmermann2*, Jörg A. Ott1, Nikolaus Leisch2 and Harald 9 Gruber-Vodicka2 10 11 1Department of Limnology and Bio-Oceanography, University of Vienna, Althanstrasse 12 14, A-1090 Vienna, Austria 2 13 Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, D-28359 Bremen, 14 Germany 15 16 *Contributed equally 17 18 19 20 Keywords: Paralaxus, thiotrophic symbiosis, systematics, ectosymbionts, molecular 21 phylogeny, cytochrome oxidase subunit I, 18S rRNA, 16S rRNA, 22 23 24 Running title: “Ectosymbiont morphology reveals new nematode genus“ 25 Scharhauser et al. 26 27 bioRxiv preprint doi: https://doi.org/10.1101/728105; this version posted August 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Scharhauser et al. 2 28 Abstract 29 Stilbonematinae are a subfamily of conspicuous marine nematodes, distinguished by a 30 coat of sulphur-oxidizing bacterial ectosymbionts on their cuticle. -
Lists of Names of Prokaryotic Candidatus Taxa
NOTIFICATION LIST: CANDIDATUS LIST NO. 1 Oren et al., Int. J. Syst. Evol. Microbiol. DOI 10.1099/ijsem.0.003789 Lists of names of prokaryotic Candidatus taxa Aharon Oren1,*, George M. Garrity2,3, Charles T. Parker3, Maria Chuvochina4 and Martha E. Trujillo5 Abstract We here present annotated lists of names of Candidatus taxa of prokaryotes with ranks between subspecies and class, pro- posed between the mid- 1990s, when the provisional status of Candidatus taxa was first established, and the end of 2018. Where necessary, corrected names are proposed that comply with the current provisions of the International Code of Nomenclature of Prokaryotes and its Orthography appendix. These lists, as well as updated lists of newly published names of Candidatus taxa with additions and corrections to the current lists to be published periodically in the International Journal of Systematic and Evo- lutionary Microbiology, may serve as the basis for the valid publication of the Candidatus names if and when the current propos- als to expand the type material for naming of prokaryotes to also include gene sequences of yet-uncultivated taxa is accepted by the International Committee on Systematics of Prokaryotes. Introduction of the category called Candidatus was first pro- morphology, basis of assignment as Candidatus, habitat, posed by Murray and Schleifer in 1994 [1]. The provisional metabolism and more. However, no such lists have yet been status Candidatus was intended for putative taxa of any rank published in the journal. that could not be described in sufficient details to warrant Currently, the nomenclature of Candidatus taxa is not covered establishment of a novel taxon, usually because of the absence by the rules of the Prokaryotic Code. -
Insights from Ant Farmers and Their Trophobiont Mutualists
Received: 28 August 2017 | Revised: 21 November 2017 | Accepted: 28 November 2017 DOI: 10.1111/mec.14506 SPECIAL ISSUE: THE HOST-ASSOCIATED MICROBIOME: PATTERN, PROCESS, AND FUNCTION Can social partnerships influence the microbiome? Insights from ant farmers and their trophobiont mutualists Aniek B. F. Ivens1,2 | Alice Gadau2 | E. Toby Kiers1 | Daniel J. C. Kronauer2 1Animal Ecology Section, Department of Ecological Science, Faculty of Science, Vrije Abstract Universiteit, Amsterdam, The Netherlands Mutualistic interactions with microbes have played a crucial role in the evolution 2Laboratory of Social Evolution and and ecology of animal hosts. However, it is unclear what factors are most important Behavior, The Rockefeller University, New York, NY, USA in influencing particular host–microbe associations. While closely related animal spe- cies may have more similar microbiota than distantly related species due to phyloge- Correspondence Aniek B. F. Ivens, Animal Ecology Section, netic contingencies, social partnerships with other organisms, such as those in Department of Ecological Science, Faculty of which one animal farms another, may also influence an organism’s symbiotic micro- Science, Vrije Universiteit, Amsterdam, The Netherlands. biome. We studied a mutualistic network of Brachymyrmex and Lasius ants farming Email: [email protected] several honeydew-producing Prociphilus aphids and Rhizoecus mealybugs to test Present address whether the mutualistic microbiomes of these interacting insects are primarily corre- Alice Gadau, Arizona -
CURRICULUM VITAE NICOLE DUBILIER Address Max-Planck
CURRICULUM VITAE NICOLE DUBILIER Address Max-Planck-Institute for Marine Microbiology (MPI-MM) Celsiusstr. 1, D-28359 Bremen Tel. +49 421 2028-932 email: [email protected] Academic Training 1985 University of Hamburg Zoology, Biochemistry, Diplom Microbiology 1992 University of Hamburg Marine Biology PhD Dissertation Title: Adaptations of the Marine Oligochaete Tubificoides benedii to Sulfide-rich Sediments: Results from Ecophysiological and Morphological Studies. Current Position Director of the Max Planck Institute for Marine Microbiology (MPI-MM) Head of the Symbiosis Department at the MPI-MM (W3 position) Professor for Microbial Symbiosis at the University of Bremen, Germany Academic Positions Since 2013 Director of the Symbiosis Department at the MPI-MM (W3 position) Since 2012 Professor for Microbial Symbiosis at the University of Bremen, Germany Since 2012 Affiliate Professor at MARUM, University of Bremen 2007 - 2013 Head of the Symbiosis Group at the MPI-MM (W2 position) 2002 - 2006 Coordinator of the International Max Planck Research School of Marine Microbiology 2004 - 2005 Invited Visiting Professor at the University of Pierre and Marie Curie, Paris, France (2 months) 2001 - 2006 Research Associate in the Department of Molecular Ecology at the MPI-MM 1998 - 2001 Postdoctoral Fellow at the MPI-MM in the DFG Project: "Evolution of symbioses between chemoautotrophic bacteria and gutless marine worms" 1997 Parental leave 1995 - 1996 Research Assistant at the University of Hamburg in the BMBF project: "Hydrothermal fluid development and material balance in the North Fiji Basin" 1993 - 1995 Postdoctoral Fellow in the laboratory of Dr. Colleen Cavanaugh, Harvard University, MA, USA in the NSF project "Biogeography of chemoautotrophic symbioses in marine oligochaetes" 1990 - 1993 Research Assistant at the University of Hamburg in the EU project 0044: Sulphide- and methane-based ecosystems. -
Cellular Dynamics During Regeneration of the Flatworm Monocelis Sp. (Proseriata, Platyhelminthes) Girstmair Et Al
Cellular dynamics during regeneration of the flatworm Monocelis sp. (Proseriata, Platyhelminthes) Girstmair et al. Girstmair et al. EvoDevo 2014, 5:37 http://www.evodevojournal.com/content/5/1/37 Girstmair et al. EvoDevo 2014, 5:37 http://www.evodevojournal.com/content/5/1/37 RESEARCH Open Access Cellular dynamics during regeneration of the flatworm Monocelis sp. (Proseriata, Platyhelminthes) Johannes Girstmair1,2, Raimund Schnegg1,3, Maximilian J Telford2 and Bernhard Egger1,2* Abstract Background: Proseriates (Proseriata, Platyhelminthes) are free-living, mostly marine, flatworms measuring at most a few millimetres. In common with many flatworms, they are known to be capable of regeneration; however, few studies have been done on the details of regeneration in proseriates, and none cover cellular dynamics. We have tested the regeneration capacity of the proseriate Monocelis sp. by pre-pharyngeal amputation and provide the first comprehensive picture of the F-actin musculature, serotonergic nervous system and proliferating cells (S-phase in pulse and pulse-chase experiments and mitoses) in control animals and in regenerates. Results: F-actin staining revealed a strong body wall, pharynx and dorsoventral musculature, while labelling of the serotonergic nervous system showed an orthogonal pattern and a well developed subepidermal plexus. Proliferating cells were distributed in two broad lateral bands along the anteroposterior axis and their anterior extension was delimited by the brain. No proliferating cells were detected in the pharynx or epidermis. Monocelis sp. was able to regenerate the pharynx and adhesive organs at the tip of the tail plate within 2 or 3 days of amputation, and genital organs within 8 to 10 days. -
Paracatenula, an Ancient Symbiosis Between Thiotrophic Alphaproteobacteria and Catenulid flatworms
Paracatenula, an ancient symbiosis between thiotrophic Alphaproteobacteria and catenulid flatworms Harald Ronald Gruber-Vodickaa,1, Ulrich Dirksa, Nikolaus Leischa, Christian Baranyib,2, Kilian Stoeckerb,3, Silvia Bulgheresic, Niels Robert Heindla,c, Matthias Hornb, Christian Lottd,e, Alexander Loyb, Michael Wagnerb, and Jörg Otta Departments of aMarine Biology, bMicrobial Ecology, and cGenetics in Ecology, University of Vienna, A-1090 Vienna, Austria; dSymbiosis Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany; and eElba Field Station, Hydra Institute for Marine Sciences, I-57034 Campo nell’Elba, Italy Edited by Nancy A. Moran, Yale University, West Haven, CT, and approved May 31, 2011 (received for review April 8, 2011) Harnessing chemosynthetic symbionts is a recurring evolutionary a wide range of protists and animals, including Ciliata (e.g., strategy. Eukaryotes from six phyla as well as one archaeon have Zoothamnium), Nematoda (Stilbonematinae and Astomonema), acquired chemoautotrophic sulfur-oxidizing bacteria. In contrast to Arthropoda (Rimicaris and Kiwa), Annelida (e.g., Riftia or Ola- this broad host diversity, known bacterial partners apparently vius), along with bivalve and gastropod Mollusca (e.g., Solemya or belong to two classes of bacteria—the Gamma-andEpsilonproteo- Neomphalina; reviewed in ref. 7), have established themselves as bacteria. Here, we characterize the intracellular endosymbionts of hosts in symbioses with SOB. They all derive some or all of their the mouthless catenulid flatworm