Amphipod Newsletter 42 2018
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A New Amphipod Species (Peracarida: Amphipoda
Available online at www.sciencedirect.com Revista Mexicana de Biodiversidad Revista Mexicana de Biodiversidad 86 (2015) 332–336 www.ib.unam.mx/revista/ Taxonomy and systematics A new amphipod species (Peracarida: Amphipoda: Ampithoidae) collected from Cenote Aerolito, Cozumel Island, Quintana Roo Una especie nueva de anfípodo (Peracarida: Amphipoda: Ampithoidae) recolectado del cenote Aerolito, isla Cozumel, Quintana Roo Manuel Ortiz, Ignacio Winfield ∗ Laboratorio de Crustáceos, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Av. de los Barrios 1, Los Reyes Iztacala, 54090 Tlalnepantla, Estado de México, Mexico Received 10 February 2014; accepted 2 February 2015 Available online 28 May 2015 Abstract A new species of amphipod belonging to the family Ampithoidae was collected from Cenote Aerolito, Cozumel Island, Quintana Roo associated with a macroalgae bed. The main differences between the new species and the previously recorded species in the Gulf of Mexico and Caribbean Sea, Cymadusa compta and Cymadusa setosa respectively, are also presented. The new species increases the globally described number of Cymadusa species to 33. All Rights Reserved © 2015 Universidad Nacional Autónoma de México, Instituto de Biología. This is an open access item distributed under the Creative Commons CC License BY-NC-ND 4.0. Keywords: Crustacea; Ampithoidae; Cymadusa; Anchialine system; Mexican Caribbean Resumen Se describe una especie nueva de anfípodo de la familia Ampithoidae recolectada de macroalgas del Cenote Aerolito, Isla Cozumel, Quintana Roo. Se presentan las principales diferencias entre la especie nueva y las especies previamente documentadas para el golfo de México y el mar Caribe, C. compta y C. setosa. Esta especie nueva incrementa el número de especies de Cymadusa a 33 a nivel global. -
Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
On the Current State of Taxonomy of the Baikal Lake Amphipods (Crustacea: Amphipoda) and the Typological Ways of Constructing Their System
Arthropoda Selecta 28(3): 374–402 © ARTHROPODA SELECTA, 2019 On the current state of taxonomy of the Baikal Lake amphipods (Crustacea: Amphipoda) and the typological ways of constructing their system Î ñîâðåìåííîì ñîñòîÿíèè òàêñîíîìèè áàéêàëüñêèõ àìôèïîä (Crustacea: Amphipoda) è òèïîëîãè÷åñêîì ñïîñîáå ïîñòðîåíèÿ èõ ñèñòåìû V.V. Takhteev1, 2 Â.Â. Òàõòååâ1, 2 1 Department of Biological and Soil Science at Irkutsk State University, Karl Marx St. 1, Irkutsk 664003, Russia. E-mail: [email protected] 1 Иркутский государственный университет, биолого-почвенный факультет, ул. К. Маркса, 1, Иркутск 664003, Россия. E-mail: [email protected] 2 Baikal Museum of Irkutsk Scientific Center SB RAS, Akademicheskaya St. 1, Listvyanka Settl., Irkutsk Region 664520, Russia. 2 Байкальский Музей Иркутского научного центра Сибирского отделения Российской академии наук, ул. Академическая, 1, пос. Листвянка Иркутской обл. 664520, Россия. KEY WORDS: amphipods, Lake Baikal, taxonomy, taxonomic inflation, archetype, core, deviations, estab- lishment of families. КЛЮЧЕВЫЕ СЛОВА: амфиподы, озеро Байкал, таксономия, таксономическая инфляция, архетип, ядро, отклонения, установление семейств. Editorial note On the publication “On the current state of taxonomy of the Baikal Lake amphipods (Crustacea, Amphipoda) and the typological ways of constructing their system” by V.V. Takhteev In this issue we present an extensive article prepared by Prof. Vadim V. Takhteev, which is based on his long time effort in the study of diversity of amphipods in Lake Baikal and its watershed. This paper is highly polemical and may even seem either archaic or heretical in the time of domination of the phylogenetic paradigms in systematics. The author advocates classical morphological taxonomy, which own tradition, methods (disregarding whether we call it typology or not) and the language are significantly older than the modern phylogenetic approach. -
Additions to and Revisions of the Amphipod (Crustacea: Amphipoda) Fauna of South Africa, with a List of Currently Known Species from the Region
Additions to and revisions of the amphipod (Crustacea: Amphipoda) fauna of South Africa, with a list of currently known species from the region Rebecca Milne Department of Biological Sciences & Marine Research Institute, University of CapeTown, Rondebosch, 7700 South Africa & Charles L. Griffiths* Department of Biological Sciences & Marine Research Institute, University of CapeTown, Rondebosch, 7700 South Africa E-mail: [email protected] (with 13 figures) Received 25 June 2013. Accepted 23 August 2013 Three species of marine Amphipoda, Peramphithoe africana, Varohios serratus and Ceradocus isimangaliso, are described as new to science and an additional 13 species are recorded from South Africa for the first time. Twelve of these new records originate from collecting expeditions to Sodwana Bay in northern KwaZulu-Natal, while one is an introduced species newly recorded from Simon’s Town Harbour. In addition, we collate all additions and revisions to the regional amphipod fauna that have taken place since the last major monographs of each group and produce a comprehensive, updated faunal list for the region. A total of 483 amphipod species are currently recognized from continental South Africa and its Exclusive Economic Zone . Of these, 35 are restricted to freshwater habitats, seven are terrestrial forms, and the remainder either marine or estuarine. The fauna includes 117 members of the suborder Corophiidea, 260 of the suborder Gammaridea, 105 of the suborder Hyperiidea and a single described representative of the suborder Ingolfiellidea. -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
Crustacea: Amphipoda: Dogielinotidae) from the Nipa Palm in Thailand, with an Updated Key to the Genera
RESEARCH ARTICLE Discovery of a new genus and species of dogielinotid amphipod (Crustacea: Amphipoda: Dogielinotidae) from the Nipa palm in Thailand, with an updated key to the genera 1,2 3 4 Koraon WongkamhaengID *, Pongrat Dumrongrojwattana , Myung-Hwa Shin a1111111111 a1111111111 1 Department of Zoology, Faculty of Science, Kasetsart University, Bangkok, Thailand, 2 Coastal Oceanography and Climate Change Research Center, Prince of Songkla University, Hatyai, Songkhla, a1111111111 Thailand, 3 Department of Biology, Faculty of Science, Burapha University, Bangsaen, Chonburi, Thailand, a1111111111 4 National Marine Biodiversity Institute of Korea, Seocheon, South Korea a1111111111 * [email protected] Abstract OPEN ACCESS Citation: Wongkamhaeng K, Dumrongrojwattana During a scientific survey, a new genus of the dogielinotid amphipoda was found in the Nipa P, Shin M (2018) Discovery of a new genus and palm (Nypa fruticans) in Bang Krachao Urban Oasis, Samut Prakan Province, Thailand. We species of dogielinotid amphipod (Crustacea: placed this new genus, Allorchestoides gen. nov., within the family Dogielinotidae. The new Amphipoda: Dogielinotidae) from the Nipa palm in Thailand, with an updated key to the genera. PLoS taxa can be easily distinguished from the remaining genera by differences in the incisor of ONE 13(10): e0204299. https://doi.org/10.1371/ the left and right mandibles, apical robust setae of the maxilla 1, and the large coxa and journal.pone.0204299 strong obtuse palm in the female gnathopod 1. The type species of Allorchestoides gen. Editor: Feng Zhang, Nanjing Agricultural University, nov., Allorchestoides rosea n. sp., is described here in, with an updated key to the genera of CHINA the family Dogielinotidae. -
Biodiversity of the Gammaridea and Corophiidea (Crustacea
Biodiversity of the Gammaridea and Corophiidea (Crustacea: Amphipoda) from the Beagle Channel and the Straits of Magellan: a preliminary comparison between their faunas Ignacio L. Chiesa1,2 & Gloria M. Alonso2 1 Laboratorio de Artrópodos, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EHA, Buenos Aires, Argentina; ichiesa@ bg.fcen.uba.ar 2 Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”, Div. Invertebrados, Av. Ángel Gallardo 470, C1405DJR, Buenos Aires, Argentina; [email protected] Received 10-XI-2005. Corrected 25-IV-2006. Accepted 16-III-2007. Abstract: Gammaridea and Corophiidea amphipod species from the Beagle Channel and the Straits of Magellan were listed for the first time; their faunas were compared on the basis of bibliographic information and material collected in one locality at Beagle Channel (Isla Becasses). The species Schraderia serraticauda and Heterophoxus trichosus (collected at Isla Becasses) were cited for the first time for the Magellan region; Schraderia is the first generic record for this region. A total of 127 species were reported for the Beagle Channel and the Straits of Magellan. Sixty-two species were shared between both passages (71.3 % similarity). The amphipod species represented 34 families and 83 genera. The similarity at genus level was 86.4 %, whereas 23 of the 34 families were present in both areas. For all species, 86 had bathymetric ranges above 100 m and only 12 species ranged below 200 m depth. In the Beagle Channel, only one species had a depth record greater than 150 m, whereas in the Straits of Magellan, 15 had such a record. -
The 17Th International Colloquium on Amphipoda
Biodiversity Journal, 2017, 8 (2): 391–394 MONOGRAPH The 17th International Colloquium on Amphipoda Sabrina Lo Brutto1,2,*, Eugenia Schimmenti1 & Davide Iaciofano1 1Dept. STEBICEF, Section of Animal Biology, via Archirafi 18, Palermo, University of Palermo, Italy 2Museum of Zoology “Doderlein”, SIMUA, via Archirafi 16, University of Palermo, Italy *Corresponding author, email: [email protected] th th ABSTRACT The 17 International Colloquium on Amphipoda (17 ICA) has been organized by the University of Palermo (Sicily, Italy), and took place in Trapani, 4-7 September 2017. All the contributions have been published in the present monograph and include a wide range of topics. KEY WORDS International Colloquium on Amphipoda; ICA; Amphipoda. Received 30.04.2017; accepted 31.05.2017; printed 30.06.2017 Proceedings of the 17th International Colloquium on Amphipoda (17th ICA), September 4th-7th 2017, Trapani (Italy) The first International Colloquium on Amphi- Poland, Turkey, Norway, Brazil and Canada within poda was held in Verona in 1969, as a simple meet- the Scientific Committee: ing of specialists interested in the Systematics of Sabrina Lo Brutto (Coordinator) - University of Gammarus and Niphargus. Palermo, Italy Now, after 48 years, the Colloquium reached the Elvira De Matthaeis - University La Sapienza, 17th edition, held at the “Polo Territoriale della Italy Provincia di Trapani”, a site of the University of Felicita Scapini - University of Firenze, Italy Palermo, in Italy; and for the second time in Sicily Alberto Ugolini - University of Firenze, Italy (Lo Brutto et al., 2013). Maria Beatrice Scipione - Stazione Zoologica The Organizing and Scientific Committees were Anton Dohrn, Italy composed by people from different countries. -
(Crustacea : Amphipoda) of the Lower Chesapeake Estuaries
W&M ScholarWorks Reports 1971 The distribution and ecology of the Gammaridea (Crustacea : Amphipoda) of the lower Chesapeake estuaries James Feely Virginia Institute of Marine Science Marvin L. Wass Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/reports Part of the Marine Biology Commons, Oceanography Commons, Terrestrial and Aquatic Ecology Commons, and the Zoology Commons Recommended Citation Feely, J., & Wass, M. L. (1971) The distribution and ecology of the Gammaridea (Crustacea : Amphipoda) of the lower Chesapeake estuaries. Special papers in marine science No.2. Virginia Institute of Marine Science, College of William and Mary. http://doi.org/10.21220/V5H01D This Report is brought to you for free and open access by W&M ScholarWorks. It has been accepted for inclusion in Reports by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. THE DISTRIBUTION AND ECOLOGY OF THE GAMMARIDEA (CRUSTACEA: AMPHIPODA) OF THE LOWER CHESAPEAKE ESTUARIES James B. Feeley and Marvin L. Wass SPECIAL PAPERS IN MARINE SCIENCE NO. 2 VIRGIN IA INSTITUTE OF MARINE SC IE NCE Gloucester Point, Virginia 23062 1971 THE DISTRIBUTION AND ECOLOGY OF THE GAMMARIDEA (CRUSTACEA: AMPHIPODA) OF THE LOWER 1 CHESAPEAKE ESTUARIES James B. Feeley and Marvin L. Wass SPECIAL PAPERS IN MARINE SCIENCE NO. 2 1971 VIRGINIA INSTITUTE OF MARINE SCIENCE Gloucester Point, Virginia 23062 This document is in part a thesis by James B. Feeley presented to the School of Marine Science of the College of William and Mary in Virginia in partial fulfillment of the requirements for the degree of Master of Arts. -
Based Phylogeny of Endemic Lake Baikal Amphipod Species Flock
Molecular Ecology (2017) 26, 536–553 doi: 10.1111/mec.13927 Transcriptome-based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection SERGEY A. NAUMENKO,*†‡ MARIA D. LOGACHEVA,*† § NINA V. POPOVA,* ANNA V. KLEPIKOVA,*† ALEKSEY A. PENIN,*† GEORGII A. BAZYKIN,*†§¶ ANNA E. ETINGOVA,** NIKOLAI S. MUGUE,††‡‡ ALEXEY S. KONDRASHOV*§§ and LEV Y. YAMPOLSKY¶¶ *Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia, †Institute for Information Transmission Problems (Kharkevich Institute) of the Russian Academy of Sciences, Moscow, Russia, ‡Genetics and Genome Biology Program, The Hospital For Sick Children, Toronto, ON, Canada, §Pirogov Russian National Research Medical University, Moscow, Russia, ¶Skolkovo Institute of Science and Technology, Skolkovo, Russia, **Baikal Museum, Irkutsk Research Center, Russian Academy of Sciences, Listvyanka, Irkutsk region, Russia, ††Laboratory of Molecular Genetics, Russian Institute for Fisheries and Oceanography (VNIRO), Moscow, Russia, ‡‡Laboratory of Experimental Embryology, Koltsov Institute of Developmental Biology, Moscow, Russia, §§Department of Ecology and Evolution, University of Michigan, Ann Arbor, MI, USA, ¶¶Department of Biological Sciences, East Tennessee State University, Johnson City, TN, USA Abstract Endemic species flocks inhabiting ancient lakes, oceanic islands and other long-lived isolated habitats are often interpreted as adaptive radiations. Yet molecular evidence for directional -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
Metazoan Parasites of Cetaceans Off the Northeastern Coast of Brazil
Veterinary Parasitology 173 (2010) 116–122 Contents lists available at ScienceDirect Veterinary Parasitology journal homepage: www.elsevier.com/locate/vetpar Metazoan parasites of cetaceans off the northeastern coast of Brazil Vitor Luz Carvalho a,b, Claudia Maria Leal Bevilaqua a,∗, Alena Mayo Iniguez˜ c, Helena Mathews-Cascon d, Felipe Bezerra Ribeiro d, Lourdes Marina Bezerra Pessoa e, Ana Carolina Oliveira de Meirelles b, João Carlos Gomes Borges f, Juliana Marigo g, Laiza Soares h, Flávio José de Lima Silva i,j a Programa de Pós-Graduac¸ ão em Ciências Veterinárias, Universidade Estadual do Ceará, Faculdade de Veterinaria, Av. Paranjana, 1700, Campus do Itaperi, Fortaleza, Ceará CEP 60740-913, Brazil b Associac¸ ão de Pesquisa e Preservac¸ ão de Ecossistemas Aquáticos (AQUASIS), Brazil c Departamento de Genética do Instituto Oswaldo Cruz, FIOCRUZ, Brazil d Laboratório de Invertebrados Marinhos, Universidade Federal do Ceará, Brazil e Faculdade de Veterinária, Universidade Estadual do Ceará, Brazil f Fundac¸ ão Mamíferos Aquáticos, Brazil g Projeto Biopesca, Brazil h Instituto Mamíferos Aquáticos, Brazil i Projeto Pequenos Cetáceos, Universidade Federal do Rio Grande do Norte, Brazil j Centro Golfinho Rotador, Brazil article info abstract Article history: This study represents the first survey of the parasitic fauna of cetaceans off the northeastern Received 20 October 2009 coast of Brazil. Parasites were collected from 82 animals rescued from the states of Ceará to Received in revised form 20 June 2010 Bahia, including the archipelago of Fernando de Noronha. A total of 14 species of cetaceans Accepted 21 June 2010 were evaluated: Sotalia guianensis, Stenella sp., Stenella clymene, Stenella longirostris, Stenella coeruleoalba, Stenella frontalis, Megaptera novaeangliae, Peponocephala electra, Steno breda- Keywords: nensis, Kogia breviceps, Kogia sima, Globicephala macrorhynchus, Tursiops truncatus, Physeter Cetaceans macrocephalus and Lagenodelphis hosei.