Reproductive Biology and Phylogeny of Urodela
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High Diversity of Frankia and Ectomycorrhizal Fungi Revealed from Alnus Glutinosa Subsp
Alder and the Golden Fleece: high diversity of Frankia and ectomycorrhizal fungi revealed from Alnus glutinosa subsp. barbata roots close to a Tertiary and glacial refugium Melanie Roy, Adrien Pozzi, Raphaëlle Gareil, Melissande Nagati, Sophie Manzi, Imen Nouioui, Nino Sharikadze, Patricia Jargeat, Hervé Gryta, Pierre-Arthur Moreau, et al. To cite this version: Melanie Roy, Adrien Pozzi, Raphaëlle Gareil, Melissande Nagati, Sophie Manzi, et al.. Alder and the Golden Fleece: high diversity of Frankia and ectomycorrhizal fungi revealed from Alnus glutinosa subsp. barbata roots close to a Tertiary and glacial refugium. PeerJ, PeerJ, 2017, 10.7717/peerj.3479. hal-01570368 HAL Id: hal-01570368 https://hal.archives-ouvertes.fr/hal-01570368 Submitted on 29 Jul 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Alder and the Golden Fleece: high diversity of Frankia and ectomycorrhizal fungi revealed from Alnus glutinosa subsp. barbata roots close to a Tertiary and glacial refugium Melanie Roy1, Adrien C. Pozzi2, Raphaëlle Gareil1, Melissande Nagati1, Sophie -
Status and Protection of Globally Threatened Species in the Caucasus
STATUS AND PROTECTION OF GLOBALLY THREATENED SPECIES IN THE CAUCASUS CEPF Biodiversity Investments in the Caucasus Hotspot 2004-2009 Edited by Nugzar Zazanashvili and David Mallon Tbilisi 2009 The contents of this book do not necessarily reflect the views or policies of CEPF, WWF, or their sponsoring organizations. Neither the CEPF, WWF nor any other entities thereof, assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, product or process disclosed in this book. Citation: Zazanashvili, N. and Mallon, D. (Editors) 2009. Status and Protection of Globally Threatened Species in the Caucasus. Tbilisi: CEPF, WWF. Contour Ltd., 232 pp. ISBN 978-9941-0-2203-6 Design and printing Contour Ltd. 8, Kargareteli st., 0164 Tbilisi, Georgia December 2009 The Critical Ecosystem Partnership Fund (CEPF) is a joint initiative of l’Agence Française de Développement, Conservation International, the Global Environment Facility, the Government of Japan, the MacArthur Foundation and the World Bank. This book shows the effort of the Caucasus NGOs, experts, scientific institutions and governmental agencies for conserving globally threatened species in the Caucasus: CEPF investments in the region made it possible for the first time to carry out simultaneous assessments of species’ populations at national and regional scales, setting up strategies and developing action plans for their survival, as well as implementation of some urgent conservation measures. Contents Foreword 7 Acknowledgments 8 Introduction CEPF Investment in the Caucasus Hotspot A. W. Tordoff, N. Zazanashvili, M. Bitsadze, K. Manvelyan, E. Askerov, V. Krever, S. Kalem, B. Avcioglu, S. Galstyan and R. Mnatsekanov 9 The Caucasus Hotspot N. -
Caudata: Hynobiidae): Heterochronies and Reductions
65 (1): 117 – 130 © Senckenberg Gesellschaft für Naturforschung, 2015. 4.5.2015 Development of the bony skeleton in the Taiwan salamander, Hynobius formosanus Maki, 1922 (Caudata: Hynobiidae): Heterochronies and reductions Anna B. Vassilieva 1 *, June-Shiang Lai 2, Shang-Fang Yang 2, Yu-Hao Chang 1 & Nikolay A. Poyarkov, Jr. 1 1 Department of Vertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, Leninskiye Gory, GSP-1, Moscow 119991, Russia — 2 Department of Life Science, National Taiwan Normal University, 88, Sec. 4 Tingchou Rd., Taipei 11677, Taiwan, R.O.C. — *Cor- responding author; vassil.anna(at)gmail.com Accepted 19.ii.2015. Published online at www.senckenberg.de / vertebrate-zoology on 4.v.2015. Abstract The development of the bony skeleton in a partially embryonized lotic-breeding salamander Hynobius formosanus is studied using the ontogenetic series from late embryos to postmetamorphic juveniles and adult specimen. Early stages of skull development in this spe- cies are compared with the early cranial ontogeny in two non-embryonized lentic-breeding species H. lichenatus and H. nigrescens. The obtained results show that skeletal development distinguishes H. formosanus from other hynobiids by a set of important features: 1) the reduction of provisory ossifications (complete absence of palatine and reduced state of coronoid), 2) alteration of a typical sequence of ossification appearance, namely, the delayed formation of vomer and coronoid, and 3) the absence of a separate ossification center of a lacrimal and formation of a single prefrontolacrimal. These unique osteological characters in H. formosanus are admittedly connected with specific traits of its life history, including partial embryonization, endogenous feeding until the end of metamorphosis and relatively short larval period. -
Beaver Facilitation in the Conservation of Boreal Anuran Communities (Anura: Bufonidae, Ranidae)
vehkaoja_nummi_beaves__Anuran_conservation_HerPetozoA.qxd 28.07.2015 15:07 Seite 1 HerPetozoA 28 (1/2): 75 - 87 75 Wien, 30. Juli 2015 beaver facilitation in the conservation of boreal anuran communities (Anura: bufonidae, ranidae) Die Förderung des bibers und die erhaltung der borealen Anurengemeinschaften (Anura: bufonidae, ranidae) miA veHkAoJA & P etri nummi kurzFASSunG Artensterben und Habitatverlust verlaufen in europa und weltweit rasant. Amphibien und Feuchtlebens - räume sind ganz wesentlich davon betroffen. letztere warden in der borealen zone häufig durch die Dammbau- tätigkeit des bibers ( Castor sp.) bereitgestellt. Die Autoren untersuchten die Anurenfauna in zehn derartigen biber-Gewässern, zehn nicht vom biber bewohnten und acht temporären Wasserkörpern in Finland. Alle drei in der region heimischen Anurenarten (erdkröte, moor- und Grasfrosch) besiedelten die biber-Gewässer, wobei der moorfrosch in nicht vom biber bewohnten und temporären Gewässern des Gebietes nicht gefunden wurde. moorfrösche profitierten offensichtlich vom teichbaua und dem Fällen von bäumen durch den biber und die damit verbundene Schaffung einer vielzahl von seichten Gewässerabschnitten mit breiten emersen vegetationsgürteln. Die ergebnisse zeigen, daß biber qualitative hochwertige Anurenhabitate schaffen und das vorkommen des moorfrosches begünstigen.. es wird angeregt, biber als ingenieure bei der Wiederherstellung von Ökosystemen einzusetzen, um die ziele des Amphibienschutzes zu unterstützen. AbStrACt A rapid loss of species and habitats is occurring globally. Amphibians and wetlands are important compo - nents of this overall decline. Wetlands in the boreal region are frequently constructed by damming activities of an ecosystem engineer, the beaver ( Castor sp.). the authors investigated the anuran fauna in ten such ‘beaver ponds’, ten ‘non-beaver ponds’ and eight temporary ponds in Finland. -
Successful Reproduction of the Mole Salamander Ambystoma Talpoideum in Captivity, with an Emphasis on Stimuli Environmental Determinants
SHORT NOTE The Herpetological Bulletin 141, 2017: 28-31 Successful reproduction of the mole salamander Ambystoma talpoideum in captivity, with an emphasis on stimuli environmental determinants AXEL HERNANDEZ Department of Environmental Sciences, Faculty of Sciences and Technics, University Pasquale Paoli of Corsica, Corte, 20250, France Author Email: [email protected] ABSTRACT - Generating and promoting evidence-based husbandry protocols for urodeles, commonly known as newts and salamanders, is urgently needed because most of the up-to-date ex situ programs are focused on frogs and toads than Urodela. Data on biology, life history, ecology and environmental parameters are lacking for many species and are needed to establish suitable husbandry and breeding conditions in captive environments. Two adult females and two adult males, of the mole salamander Ambystoma talpoideum successfully reproduced in captivity. It was found that reproduction of this species depends on various complex stimuli: including natural photoperiod 12:12, rainwater (acidic to neutral pH) and an aquarium full of various debris. Additionally high temperature variations ranging from 2 °C to 17 °C (a decrease followed by an increase) between November and February showed that it is possible to breed adults in aquariums provided the right stimuli are applied at the right moment of time in winter. A. talpoideum shows an explosive breeding mode as previously reported for the whole genus Ambystoma. INTRODUCTION with an emphasis on the environmental determinant stimuli involved. These data may assist in improving breeding these ince the 1980s, the current global amphibian extinction salamanders under artificial conditions. crisis has been discussed and acknowledged (Wake, A. -
Georgia Environmental Performance Reviews Third Review
UNECE Georgia Environmental Performance Reviews Third Review UNITED NATIONS ECE/CEP/177 UNITED NATIONS ECONOMIC COMMISSION FOR EUROPE ENVIRONMENTAL PERFORMANCE REVIEWS GEORGIA Third Review UNITED NATIONS New York and Geneva, 2016 Environmental Performance Reviews Series No. 43 NOTE Symbols of United Nations documents are composed of capital letters combined with figures. Mention of such a symbol indicates a reference to a United Nations document. The designations employed and the presentation of the material in this publication do not imply the expression of any opinion whatsoever on the part of the Secretariat of the United Nations concerning the legal status of any country, territory, city or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. In particular, the boundaries shown on the maps do not imply official endorsement or acceptance by the United Nations. The United Nations issued the second Environmental Performance Review of Georgia (Environmental Performance Reviews Series No. 30) in 2010. This volume is issued in English only. ECE/CEP/177 UNITED NATIONS PUBLICATION Sales E.16.II.E.3 ISBN 978-92-1-117101-3 e-ISBN 978-92-1-057683-3 ISSN 1020-4563 iii Foreword It is essential to monitor progress towards environmental sustainability and to evaluate how countries reconcile environmental and economic targets and meet their international environmental commitments. Through regular monitoring and evaluation, countries may more effectively stay ahead of emerging environmental issues, improve their environmental performance and be accountable to their citizens. The ECE Environmental Performance Review Programme provides valuable assistance to member States by regularly assessing their environmental performance so that they can take steps to improve their environmental management, integrate environmental considerations into economic sectors, increase the availability of information to the public and promote information exchange with other countries on policies and experiences. -
Abundance, Distribution, Population Structure, and Substrate Use of Ambystoma Altamirani Along the Arroyo Los Axolotes, State of Mexico, Mexico
Herpetological Conservation and Biology 15(1):188–197. Submitted: 16 August 2019; Accepted: 23 February 2020; Published: 30 April 2020. ABUNDANCE, DISTRIBUTION, POPULATION STRUCTURE, AND SUBSTRATE USE OF AMBYSTOMA ALTAMIRANI ALONG THE ARROYO LOS AXOLOTES, STATE OF MEXICO, MEXICO VIRIDIANA VILLARREAL HERNÁNDEZ1, GEOFFREY R. SMITH2, RAYMUNDO MONTOYA AYALA3, AND JULIO A. LEMOS-ESPINAL1,4 1Laboratorio de Ecología - Unidad de Biotecnología y Prototipos, Facultad de Estudios Superiores Iztacala, Avendina Los Barrios 1, Los Reyes Iztacala, Tlalnepantla, Estado de México, 54090, México 2Department of Biology, Denison University, Granville, Ohio 43023, USA 3Laboratorio de Cómputo - Unidad de Biotecnología y Prototipos, Facultad de Estudios Superiores Iztacala, Avenida Los Barrios 1, Los Reyes Iztacala, Tlalnepantla, Estado de México, 54090, México 4Corresponding author: e-mail: [email protected] Abstract.—Ambystomatid salamanders in central Mexico are confronted by anthropogenic threats that can limit their distribution and abundance. Ambystoma altamirani (Mountain Stream Siredon) is listed as Endangered by the International Union for Conservation of Nature (IUCN) Red List and as Threatened by the Mexican government. We report on the distribution, abundance, occupancy, population structure, and substrate use of A. altamirani, a stream dwelling salamander, along the Arroyo los Axolotes, Sierra de las Cruces, Mexico. We observed A. altamirani at least once during repeated surveys between February 2018 to December 2018 in 24 of 25 permanent 5-m long reaches separated by 40 m. The best model for occupancy had constant occupancy, detection, extinction, and colonization probabilities. Sites that dried at some time during the study had fewer observed individuals than those that did not dry. Size structure was relatively constant throughout the year, except for the appearance of small larvae in May, June, and July. -
AMBYSTOMA TALPOIDEUM (Mole Salamander)
AMBYSTOMA TALPOIDEUM (Mole Salamander). POLYMELIA. Amphibian malformations have been the topic of scientific and public interest for the past decade. Naturally- occurring deformities occur in populations, but are rare, usually less than 2% of individuals (Eaton et al. 2004. J. Herpetol. 38:283–287). Herein I describe a Mole Salamander with an unusual deformity. Paedogenic Mole Salamanders were dipnetted from a permanent pond in the Whitehall Experimental Forest near the University of Georgia campus in Athens, Georgia (USA), on 11 Dec 2008. This pond contains a large population of paedogenic Mole Salamanders in most years (ca. 300). A total of 7 males and 8 females were captured. Of these, all appeared normal except one male, which had an extra right forelimb (Fig. 1). The malformed male, along with 6 normal males (‘reference males’), were examined in detail; I made note of the degree of swelling of the cloaca; total length (from snout to tail tip) was measured to the nearest 0.1 cm. Herpetological Review 41(3), 2010 327 FIG. 1. Paedogenic Mole Salamander (Ambystoma talpoideum) with an extra forelimb on its right side. The extra limb originates from the middle part of the humerus, and has two toes (inset photo). When examined in the lab it was clear there was an extra limb emerging from the humerus of its right forelimb (Fig. 1). The extra limb appeared to have an elbow and there were two toes. The limb was emerging from the posterior side of the right humerus, so that it trailed behind the salamander when it moved. A video of the salamander can be viewed at http:// picasaweb.google.com/AndyDavisUGA/5LeggedMoleSalaman der#. -
Biodiversity Action Plan
Environmental and Social Impact Assessment – Part 6 Project Number: 47919 April 2014 GEO: Adjaristsqali Hydropower Project Prepared by Mott MacDonald and Adjaristsqali Georgia LLC for the Asian Development Bank The environmental impact assessment is a document of the borrower. The views expressed herein do not necessarily represent those of ADB's Board of Directors, Management, or staff, and may be preliminary in nature. Your attention is directed to the “Terms of Use” section of this website. In preparing any country program or strategy, financing any project, or by making any designation of or reference to a particular territory or geographic area in this document, the Asian Development Bank does not intend to make any judgments as to the legal or other status of any territory or area. Biodiversity Action Plan Adjaristsqali Hydropower Cascade Project December 2013 Adjaristsqali Georgia LLC Biodiversity290039 EVT Action EMS 01Plan A http://pims01/pims/llisapi.dll/open/1516754514 1 November 2012 Adjaristsqali Hydropower Cascade Project December 2013 Adjaristsqali Georgia LLC 1. Abashidze Street 6, 6010 Batumi, Georgia Mott MacDonald, Demeter House, Station Road, Cambridge CB1 2RS, United Kingdom t +44 (0)1223 463500 f +44 (0)1223 461007, www.mottmac.com Biodiversity Action Plan Issue and revision record Revision Date Originator Checker Approver Description A 2/11/2012 Celia Figueira Vanessa Hovland Caroline McParland Draft for client review Mihai Coroi Tristan Folland Róisín Ní Mhathúna B 29/11/2012 Mihai Coroi Vanessa Hovland Final Draft -
The Ecology and Endocrinology of Facultative Paedomorphosis
University of Mississippi eGrove Electronic Theses and Dissertations Graduate School 2019 Extended Adolescence: The Ecology and Endocrinology of Facultative Paedomorphosis Jason R. Bohenek University of Mississippi Follow this and additional works at: https://egrove.olemiss.edu/etd Part of the Biology Commons Recommended Citation Bohenek, Jason R., "Extended Adolescence: The Ecology and Endocrinology of Facultative Paedomorphosis" (2019). Electronic Theses and Dissertations. 1554. https://egrove.olemiss.edu/etd/1554 This Dissertation is brought to you for free and open access by the Graduate School at eGrove. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of eGrove. For more information, please contact [email protected]. EXTENDED ADOLESCENCE: THE ECOLOGY AND ENDOCRINOLOGY OF FACULTATIVE PAEDOMORPHOSIS A Dissertation presented in partial fulfillment of requirements for the degree of Doctor of Philosophy in the Department of Biology The University of Mississippi by JASON R. BOHENEK May 2019 i Copyright © 2019 by Jason R. Bohenek All rights reserved. i ABSTRACT Phenotypic plasticity is an adaptation to unpredictable environments whereby an organism of a single genotype may express more than one phenotype under differing environmental conditions. Phenotypic plasticity can manifest as polyphenisms, which is an extreme form of phenotypic plasticity that produces two or more discrete, alternative phenotypes. The expression of alternative phenotypes is controlled by biotic and abiotic environmental factors, which variably affect the strength and direction of phenotypic outcomes. Using a model polyphenic salamander, I sought to understand the ecological and hormonal processes that regulate alternative phenotype expression. The mole salamander (Ambystoma talpoideum) and eastern newt (Notophthalmus viridescens) are facultatively paedomorphic, which is a polyphenism with two alternative adult phenotypes: paedomorphs and metamorphs. -
Strasbourg, 22 May 2002
Strasbourg, 21 October 2015 T-PVS/Inf (2015) 18 [Inf18e_2015.docx] CONVENTION ON THE CONSERVATION OF EUROPEAN WILDLIFE AND NATURAL HABITATS Standing Committee 35th meeting Strasbourg, 1-4 December 2015 GROUP OF EXPERTS ON THE CONSERVATION OF AMPHIBIANS AND REPTILES 1-2 July 2015 Bern, Switzerland - NATIONAL REPORTS - Compilation prepared by the Directorate of Democratic Governance / The reports are being circulated in the form and the languages in which they were received by the Secretariat. This document will not be distributed at the meeting. Please bring this copy. Ce document ne sera plus distribué en réunion. Prière de vous munir de cet exemplaire. T-PVS/Inf (2015) 18 - 2 – CONTENTS / SOMMAIRE __________ 1. Armenia / Arménie 2. Austria / Autriche 3. Belgium / Belgique 4. Croatia / Croatie 5. Estonia / Estonie 6. France / France 7. Italy /Italie 8. Latvia / Lettonie 9. Liechtenstein / Liechtenstein 10. Malta / Malte 11. Monaco / Monaco 12. The Netherlands / Pays-Bas 13. Poland / Pologne 14. Slovak Republic /République slovaque 15. “the former Yugoslav Republic of Macedonia” / L’« ex-République yougoslave de Macédoine » 16. Ukraine - 3 - T-PVS/Inf (2015) 18 ARMENIA / ARMENIE NATIONAL REPORT OF REPUBLIC OF ARMENIA ON NATIONAL ACTIVITIES AND INITIATIVES ON THE CONSERVATION OF AMPHIBIANS AND REPTILES GENERAL INFORMATION ON THE COUNTRY AND ITS BIOLOGICAL DIVERSITY Armenia is a small landlocked mountainous country located in the Southern Caucasus. Forty four percent of the territory of Armenia is a high mountainous area not suitable for inhabitation. The degree of land use is strongly unproportional. The zones under intensive development make 18.2% of the territory of Armenia with concentration of 87.7% of total population. -
Species Tree Reconstruction of a Poorly Resolved Clade of Salamanders (Ambystomatidae) Using Multiple Nuclear Loci ⇑ Joshua S
Molecular Phylogenetics and Evolution 68 (2013) 671–682 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Species tree reconstruction of a poorly resolved clade of salamanders (Ambystomatidae) using multiple nuclear loci ⇑ Joshua S. Williams a, , John H. Niedzwiecki b, David W. Weisrock a a Department of Biology, University of Kentucky, Lexington, KY 40506, USA b Department of Biology, Belmont University, Nashville, TN 37212, USA article info abstract Article history: The analysis of diverse data sets can yield different phylogenetic estimates that challenge systematists to Received 13 June 2012 explain the source of discordance. The mole salamanders (family Ambystomatidae) are a classic example Revised 14 April 2013 of this phylogenetic conflict. Previous attempts to resolve the ambystomatid species tree using allozymic, Accepted 16 April 2013 morphological, and mitochondrial sequence data have yielded different estimates, making it unclear Available online 28 April 2013 which data source best approximates ambystomatid phylogeny and which ones yield phylogenetically inaccurate reconstructions. To shed light on this conflict, we present the first multi-locus DNA Keywords: sequence-based phylogenetic study of the Ambystomatidae. We utilized a range of analyses, including Coalescent analysis coalescent-based methods of species-tree estimation that account for incomplete lineage sorting within Concordance analysis Bayesian analysis a locus and concordance-based methods that estimate the number of sampled loci that support a partic- Gene tree ular clade. We repeated these analyses with the removal of individual loci to determine if any locus has a Species tree disproportionate effect on our phylogenetic results. Collectively, these results robustly resolved many Ambystoma deep and relatively shallow clades within Ambystoma, including the placement of A.