Wing Venation Pattern of Plecoptera (Insecta: Neoptera)
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The Mitochondrial Genomes of Palaeopteran Insects and Insights
www.nature.com/scientificreports OPEN The mitochondrial genomes of palaeopteran insects and insights into the early insect relationships Nan Song1*, Xinxin Li1, Xinming Yin1, Xinghao Li1, Jian Yin2 & Pengliang Pan2 Phylogenetic relationships of basal insects remain a matter of discussion. In particular, the relationships among Ephemeroptera, Odonata and Neoptera are the focus of debate. In this study, we used a next-generation sequencing approach to reconstruct new mitochondrial genomes (mitogenomes) from 18 species of basal insects, including six representatives of Ephemeroptera and 11 of Odonata, plus one species belonging to Zygentoma. We then compared the structures of the newly sequenced mitogenomes. A tRNA gene cluster of IMQM was found in three ephemeropteran species, which may serve as a potential synapomorphy for the family Heptageniidae. Combined with published insect mitogenome sequences, we constructed a data matrix with all 37 mitochondrial genes of 85 taxa, which had a sampling concentrating on the palaeopteran lineages. Phylogenetic analyses were performed based on various data coding schemes, using maximum likelihood and Bayesian inferences under diferent models of sequence evolution. Our results generally recovered Zygentoma as a monophyletic group, which formed a sister group to Pterygota. This confrmed the relatively primitive position of Zygentoma to Ephemeroptera, Odonata and Neoptera. Analyses using site-heterogeneous CAT-GTR model strongly supported the Palaeoptera clade, with the monophyletic Ephemeroptera being sister to the monophyletic Odonata. In addition, a sister group relationship between Palaeoptera and Neoptera was supported by the current mitogenomic data. Te acquisition of wings and of ability of fight contribute to the success of insects in the planet. -
Aquatic Insects Are Dramatically Underrepresented in Genomic Research
insects Communication Aquatic Insects Are Dramatically Underrepresented in Genomic Research Scott Hotaling 1,* , Joanna L. Kelley 1 and Paul B. Frandsen 2,3,* 1 School of Biological Sciences, Washington State University, Pullman, WA 99164, USA; [email protected] 2 Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT 84062, USA 3 Data Science Lab, Smithsonian Institution, Washington, DC 20002, USA * Correspondence: [email protected] (S.H.); [email protected] (P.B.F.); Tel.: +1-(828)-507-9950 (S.H.); +1-(801)-422-2283 (P.B.F.) Received: 20 August 2020; Accepted: 3 September 2020; Published: 5 September 2020 Simple Summary: The genome is the basic evolutionary unit underpinning life on Earth. Knowing its sequence, including the many thousands of genes coding for proteins in an organism, empowers scientific discovery for both the focal organism and related species. Aquatic insects represent 10% of all insect diversity, can be found on every continent except Antarctica, and are key components of freshwater ecosystems. However, aquatic insect genome biology lags dramatically behind that of terrestrial insects. If genomic effort was spread evenly, one aquatic insect genome would be sequenced for every ~9 terrestrial insect genomes. Instead, ~24 terrestrial insect genomes have been sequenced for every aquatic insect genome. A lack of aquatic genomes is limiting research progress in the field at both fundamental and applied scales. We argue that the limited availability of aquatic insect genomes is not due to practical limitations—small body sizes or overly complex genomes—but instead reflects a lack of research interest. We call for targeted efforts to expand the availability of aquatic insect genomic resources to empower future research. -
Monte L. Bean Life Science Museum Brigham Young University Provo, Utah 84602 PBRIA a Newsletter for Plecopterologists
No. 10 1990/1991 Monte L. Bean Life Science Museum Brigham Young University Provo, Utah 84602 PBRIA A Newsletter for Plecopterologists EDITORS: Richard W, Baumann Monte L. Bean Life Science Museum Brigham Young University Provo, Utah 84602 Peter Zwick Limnologische Flußstation Max-Planck-Institut für Limnologie, Postfach 260, D-6407, Schlitz, West Germany EDITORIAL ASSISTANT: Bonnie Snow REPORT 3rd N orth A merican Stonefly S ymposium Boris Kondratieff hosted an enthusiastic group of plecopterologists in Fort Collins, Colorado during May 17-19, 1991. More than 30 papers and posters were presented and much fruitful discussion occurred. An enjoyable field trip to the Colorado Rockies took place on Sunday, May 19th, and the weather was excellent. Boris was such a good host that it was difficult to leave, but many participants traveled to Santa Fe, New Mexico to attend the annual meetings of the North American Benthological Society. Bill Stark gave us a way to remember this meeting by producing a T-shirt with a unique “Spirit Fly” design. ANNOUNCEMENT 11th International Stonefly Symposium Stan Szczytko has planned and organized an excellent symposium that will be held at the Tree Haven Biological Station, University of Wisconsin in Tomahawk, Wisconsin, USA. The registration cost of $300 includes lodging, meals, field trip and a T- Shirt. This is a real bargain so hopefully many colleagues and friends will come and participate in the symposium August 17-20, 1992. Stan has promised good weather and good friends even though he will not guarantee that stonefly adults will be collected during the field trip. Printed August 1992 1 OBITUARIES RODNEY L. -
The Homology of Wing Base Sclerites and Flight Muscles In
Arthropod Structure & Development 36 (2007) 253e269 www.elsevier.com/locate/asd The homology of wing base sclerites and flight muscles in Ephemeroptera and Neoptera and the morphology of the pterothorax of Habroleptoides confusa (Insecta: Ephemeroptera: Leptophlebiidae) Jana Willkommen*, Thomas Ho¨rnschemeyer1 Blumenbach-Institut fu¨r Zoologie & Anthropologie, Abt. Morphologie & Systematik, Berliner Str. 28, D-37073 Go¨ttingen, Germany Received 9 November 2006; accepted 11 January 2007 Abstract The ability to fly is the decisive factor for the evolutionary success of winged insects (Pterygota). Despite this, very little is known about the ground-pattern and evolution of the functionally very important wing base. Here we use the Ephemeroptera, usually regarded as the most ancient flying insects, as a model for the analysis of the flight musculature and the sclerites of the wing base. Morphology and anatomy of the pterothorax of 13 species of Ephemeroptera and five species of Plecoptera were examined and a detailed description of Habroleptoides confusa (Ephemero- ptera: Leptophlebiidae) is given. A new homology of the wing base sclerites in Ephemeroptera is proposed. The wing base of Ephemeroptera possesses three axillary sclerites that are homologous to the first axillary, the second axillary and the third axillary of Neoptera. For example, the third axillary possesses the axillary-pleural muscle that mostly is considered as a characteristic feature of the Neoptera. Many of the muscles and sclerites of the flight system of the Ephemeroptera and Neoptera can be readily homologised. In fact, there are indications that a foldable wing base may be a ground plan feature of pterygote insects and that the non-foldable wing base of the Ephemeroptera is a derived state. -
André Nel Sixtieth Anniversary Festschrift
Palaeoentomology 002 (6): 534–555 ISSN 2624-2826 (print edition) https://www.mapress.com/j/pe/ PALAEOENTOMOLOGY PE Copyright © 2019 Magnolia Press Editorial ISSN 2624-2834 (online edition) https://doi.org/10.11646/palaeoentomology.2.6.1 http://zoobank.org/urn:lsid:zoobank.org:pub:25D35BD3-0C86-4BD6-B350-C98CA499A9B4 André Nel sixtieth anniversary Festschrift DANY AZAR1, 2, ROMAIN GARROUSTE3 & ANTONIO ARILLO4 1Lebanese University, Faculty of Sciences II, Department of Natural Sciences, P.O. Box: 26110217, Fanar, Matn, Lebanon. Email: [email protected] 2State Key Laboratory of Palaeobiology and Stratigraphy, Center for Excellence in Life and Paleoenvironment, Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences, Nanjing 210008, China. 3Institut de Systématique, Évolution, Biodiversité, ISYEB-UMR 7205-CNRS, MNHN, UPMC, EPHE, Muséum national d’Histoire naturelle, Sorbonne Universités, 57 rue Cuvier, CP 50, Entomologie, F-75005, Paris, France. 4Departamento de Biodiversidad, Ecología y Evolución, Facultad de Biología, Universidad Complutense, Madrid, Spain. FIGURE 1. Portrait of André Nel. During the last “International Congress on Fossil Insects, mainly by our esteemed Russian colleagues, and where Arthropods and Amber” held this year in the Dominican several of our members in the IPS contributed in edited volumes honoring some of our great scientists. Republic, we unanimously agreed—in the International This issue is a Festschrift to celebrate the 60th Palaeoentomological Society (IPS)—to honor our great birthday of Professor André Nel (from the ‘Muséum colleagues who have given us and the science (and still) national d’Histoire naturelle’, Paris) and constitutes significant knowledge on the evolution of fossil insects a tribute to him for his great ongoing, prolific and his and terrestrial arthropods over the years. -
Phylogeographic and Nested Clade Analysis of the Stonefly Pteronarcys
J. N. Am. Benthol. Soc., 2004, 23(4):824–838 q 2004 by The North American Benthological Society Phylogeographic and nested clade analysis of the stonefly Pteronarcys californica (Plecoptera:Pteronarcyidae) in the western USA JOHN S. K. KAUWE1 Department of Biology, Washington University, St. Louis, Missouri 63110 USA DENNIS K. SHIOZAWA2 Department of Integrative Biology, Brigham Young University, Provo, Utah 84602 USA R. PAUL EVANS3 Department of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah 84602 USA Abstract. Long-distance dispersal by aquatic insects can be difficult to detect because direct mea- surement methods are expensive and inefficient. When dispersal results in gene flow, signs of that dispersal can be detected in the pattern of genetic variation within and between populations. Four hundred seventy-five base pairs of the mitochondrial gene, cytochrome b, were examined to inves- tigate the pattern of genetic variation in populations of the stonefly Pteronarcys californica and to determine if long-distance dispersal could have contributed to this pattern. Sequences were obtained from 235 individuals from 31 different populations in the western United States. Sequences also were obtained for Pteronarcella badia, Pteronarcys dorsata, Pteronarcys princeps, Pteronarcys proteus, and Pter- onarcys biloba. Phylogenies were constructed using all of the samples. Nested clade analysis on the P. californica sequence data was used to infer the processes that have generated the observed patterns of genetic variation. An eastern North American origin and 2 distinct genetic lineages of P.californica could be inferred from the analysis. Most of the current population structure in both lineages was explained by a pattern of restricted gene flow with isolation by distance (presumably the result of dispersal via connected streams and rivers), but our analyses also suggested that long-distance, over- land dispersal has contributed to the observed pattern of genetic variation. -
14 January 2008 a Short History of Pteronarcys Californica and Pteronarcella Badia in the Logan River, Cache County, Utah by Mark Vinson, [email protected]
Last update: 14 January 2008 A short history of Pteronarcys californica and Pteronarcella badia in the Logan River, Cache County, Utah By Mark Vinson, [email protected] The salmonflies, Pteronarcys californica and Pteronarcella badia (Plecotpera: Pteronarcyidae) were once abundant in the Logan River. In a 1927 paper, James Needham wrote “Pteronarcys californica abounds in the clear waters of Logan River below 6000 feet. It is undoubtedly one of the most important insect species of the stream. Its greatest abundance seems to be in trash piles that gather against the upstream side of the larger rocks in midstream where it finds both food and shelter. Fifty or more well-grown nymphs could be taken on a screen by dislodging a single large stone (Needham, 1927)”. In later pages of this publication he comments as well on the abundance of Pteronarcella badia in the Logan River. I first noticed that Pteronarcyidae were absent in the Logan River about 10 years ago, but I did not know they had once been common until about 5 years ago. It always seemed a bit strange to that they were not in the Logan River as both species are very common in the Blacksmith Fork River - the Logan River’s largest tributary stream that drains the basin just to the south of the Logan River. Anyway, for the last 5 years I have been on a somewhat of quest to find these species in the Logan River and its tributaries and to work at summarizing the history of collections of these species in the Logan River. -
Biological Effects of Secondary Salinisation on Freshwater Microinvertebrates in Tasmania:The Acute Salinity Toxicity Testing Of
BIOLOGICAL EFFECTS OF SECONDARY SALINISATION ON FRESHWATER MACROINVERTEBRATES IN TASMANIA: THE ACUTE SALINITY TOXICITY TESTING OF SEVEN MACROINVERTEBRATES. Kaylene Allan, B. Sc., Grad. Dip. Sc. Original photo courtesy of John Gooderham Submitted to the Department of Zoology, University of Tasmania in partial fulfilment of the requirements for the degree of Masters of Applied Science James Cook University Townsville, Queensland 2006 ACKNOWLEDGEMENTS I am grateful to Leon Barmuta and Peter Davies for their theoretical guidance throughout this project. I am especially grateful to Peter for his work collating and analysing the original field data that was used as the basis for this project, and to Leon for his assistance with the statistical analysis and review of the draft report. A special thank you also goes to Laurie Cook and Tom Sloane for their initial field, laboratory and taxonomic assistance, which made the rest of the project possible. Many other people have contributed to this project and I would like to sincerely thank: Ben Kefford for his encouragement, willingness to share his expertise and prompt replies to my questions no matter where he was; Wayne Kelly and Adam Stephens for providing assistance with materials and logistics; John Gooderham for his patient help with bug identification and permission to use photos from his and Edward Tsyrlin’s publication, “The Waterbug Book”; Christiane Smethurst, Bryony Townhill, Anne Watson, Dorothy McCartney and Lynne Reid who volunteered their time to assist with field work - a special thank you to Christiane for her brilliant bug-finding techniques and generous assistance; Sharon Moore for proof reading the draft report; Jon Marsden Smedley for his work on the study site map and information on field sites; people at DPIWE including, Kate Wilson, Colin Bastick, Tom Krasnicki, Martin Read and Marcus Hardie who provided data and information; and Garry Davidson, Mark Hocking and Kathryn Harris for providing literature. -
Arthropods of Elm Fork Preserve
Arthropods of Elm Fork Preserve Arthropods are characterized by having jointed limbs and exoskeletons. They include a diverse assortment of creatures: Insects, spiders, crustaceans (crayfish, crabs, pill bugs), centipedes and millipedes among others. Column Headings Scientific Name: The phenomenal diversity of arthropods, creates numerous difficulties in the determination of species. Positive identification is often achieved only by specialists using obscure monographs to ‘key out’ a species by examining microscopic differences in anatomy. For our purposes in this survey of the fauna, classification at a lower level of resolution still yields valuable information. For instance, knowing that ant lions belong to the Family, Myrmeleontidae, allows us to quickly look them up on the Internet and be confident we are not being fooled by a common name that may also apply to some other, unrelated something. With the Family name firmly in hand, we may explore the natural history of ant lions without needing to know exactly which species we are viewing. In some instances identification is only readily available at an even higher ranking such as Class. Millipedes are in the Class Diplopoda. There are many Orders (O) of millipedes and they are not easily differentiated so this entry is best left at the rank of Class. A great deal of taxonomic reorganization has been occurring lately with advances in DNA analysis pointing out underlying connections and differences that were previously unrealized. For this reason, all other rankings aside from Family, Genus and Species have been omitted from the interior of the tables since many of these ranks are in a state of flux. -
Empirically Derived Indices of Biotic Integrity for Forested Wetlands, Coastal Salt Marshes and Wadable Freshwater Streams in Massachusetts
Empirically Derived Indices of Biotic Integrity for Forested Wetlands, Coastal Salt Marshes and Wadable Freshwater Streams in Massachusetts September 15, 2013 This report is the result of several years of field data collection, analyses and IBI development, and consideration of the opportunities for wetland program and policy development in relation to IBIs and CAPS Index of Ecological Integrity (IEI). Contributors include: University of Massachusetts Amherst Kevin McGarigal, Ethan Plunkett, Joanna Grand, Brad Compton, Theresa Portante, Kasey Rolih, and Scott Jackson Massachusetts Office of Coastal Zone Management Jan Smith, Marc Carullo, and Adrienne Pappal Massachusetts Department of Environmental Protection Lisa Rhodes, Lealdon Langley, and Michael Stroman Empirically Derived Indices of Biotic Integrity for Forested Wetlands, Coastal Salt Marshes and Wadable Freshwater Streams in Massachusetts Abstract The purpose of this study was to develop a fully empirically-based method for developing Indices of Biotic Integrity (IBIs) that does not rely on expert opinion or the arbitrary designation of reference sites and pilot its application in forested wetlands, coastal salt marshes and wadable freshwater streams in Massachusetts. The method we developed involves: 1) using a suite of regression models to estimate the abundance of each taxon across a gradient of stressor levels, 2) using statistical calibration based on the fitted regression models and maximum likelihood methods to predict the value of the stressor metric based on the abundance of the taxon at each site, 3) selecting taxa in a forward stepwise procedure that conditionally improves the concordance between the observed stressor value and the predicted value the most and a stopping rule for selecting taxa based on a conditional alpha derived from comparison to pseudotaxa data, and 4) comparing the coefficient of concordance for the final IBI to the expected distribution derived from randomly permuted data. -
Volume 2, Chapter 12-5: Terrestrial Insects: Hemimetabola-Notoptera
Glime, J. M. 2017. Terrestrial Insects: Hemimetabola – Notoptera and Psocoptera. Chapter 12-5. In: Glime, J. M. Bryophyte Ecology. 12-5-1 Volume 2. Interactions. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. eBook last updated 19 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 12-5 TERRESTRIAL INSECTS: HEMIMETABOLA – NOTOPTERA AND PSOCOPTERA TABLE OF CONTENTS NOTOPTERA .................................................................................................................................................. 12-5-2 Grylloblattodea – Ice Crawlers ................................................................................................................. 12-5-3 Grylloblattidae – Ice Crawlers ........................................................................................................... 12-5-3 Galloisiana ................................................................................................................................. 12-5-3 Grylloblatta ................................................................................................................................ 12-5-3 Grylloblattella ............................................................................................................................ 12-5-4 PSOCOPTERA – Booklice, Barklice, Barkflies .............................................................................................. 12-5-4 Summary ......................................................................................................................................................... -
Brandon Road: Appendix C
GLMRIS – Brandon Road Appendix C - Risk Assessment August 2017 US Army Corps of Engineers Rock Island & Chicago Districts The Great Lakes and Mississippi River Interbasin Study—Brandon Road Draft Integrated Feasibility Study and Environmental Impact Statement—Will County, Illinois (Page Intentionally Left Blank) Appendix C – Risk Assessment Table of Contents ATTACHMENT 1: PROBABILITY OF ESTABLISHMENT ........... C-2 ATTACHMENT 2: SENSITIVITY ANALYSIS FOR ASIAN CARP POPULATION SIZES ............. C-237 C-1 Attachment 1: Probability of Establishment Introduction This appendix describes the process by which the probabilities of establishment (P(establishment)) for Asian carp (both Bighead and Silver carp) and A. lacustre were estimated, as well as the results of that process. Each species is addressed separately, with the Bighead and Silver carp process described first, followed by the A. lacustre process. Each species narrative is developed as follows: • Estimating P(establishment) • The Experts • The Elicitation • The Model • The Composite Expert • The Results o Probability of Establishment If No New Federal Action Is Taken (No New Federal Action Alternative) o P(establishment) Estimates by expert associated with each alternative Using Individual Expert Opinions o P(establishment) Estimates by alternative Using Individual Expert Opinions • Comparison of the Technology and Nonstructural Alternative to the No New Federal Action Alternative Bighead and Silver Carp Estimating P(establishment) The GLMRIS Risk Assessment provided qualitative estimates of the P(establishment) of Bighead and Silver Carp. The overall P(establishment) was defined in that document as consisting of five probability values using conditional notation: P(establishment) = P(pathway) x P(arrival|pathway) x P(passage|arrival) x P(colonization|passage) x P(spread|colonization) Each of the probability element values assumes that the preceeding element has occurred (e.g.