Activation of the UNC5B Receptor by Netrin-1 Inhibits Sprouting Angiogenesis
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UNIVERSITY of CALIFORNIA, IRVINE Netrin-Mediated Signaling
UNIVERSITY OF CALIFORNIA, IRVINE Netrin-mediated signaling directs central neuron dendrite growth and connectivity in the developing vertebrate visual system DISSERTATION submitted in partial satisfaction of the requirements for the degree of DOCTOR OF PHILOSOPHY in Biological Sciences by Anastasia Nicole Nagel Dissertation Committee: Professor Susana Cohen-Cory, Chair Associate Professor Karina S. Cramer Professor Georg F. Striedter 2015 © 2015 Anastasia Nicole Nagel DEDICATION To those who have supported me in my pursuit of understanding the natural world: my husband, family, friends and those who we have lost along the way but who remain present in spirit. “There are naive questions, tedious questions, ill-phrased questions, questions put after inadequate self-criticism. But every question is a cry to understand the world. There is no such thing as a dumb question.” Carl Sagan, The Demon-Haunted World: Science as a Candle in the Dark ii TABLE OF CONTENTS Page LIST OF FIGURES iv ACKNOWLEDGMENTS vi CURRICULUM VITAE vii ABSTRACT OF THE DISSERTATION x INTRODUCTION 1 CHAPTER 1: Molecular signals regulate visual system development 4 Netrin regulates neurodevelopment through diverse receptor binding 9 The role of netrin-1 in retinotectal circuit formation 19 Summary and objectives 27 CHAPTER 2: Netrin directs dendrite growth and connectivity in vivo 29 Introduction 29 Materials and Methods 31 Results 36 Discussion 64 CHAPTER 3: DCC and UNC5 Netrin receptor signaling guides dendritogenesis 70 Introduction 70 Materials and Methods 72 Results 77 Discussion 102 CHAPTER 4: Decreases in Netrin signaling impact visual system function 113 Introduction 113 Materials and Methods 114 Results 116 Discussion 121 CHAPTER 5: Summary and Conclusions 122 REFERENCES 129 iii LIST OF FIGURES Page Figure 1.1 Neuron during general developmental processes 5 Figure 1.2 Signaling molecules that direct visual system formation 8 Figure 1.3 Schematic representation of a netrin-1 gradient in the spinal cord 13 Figure 1.4 Diagram of the X. -
Understanding Axon Guidance: Are We Nearly There Yet?
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2018 Understanding axon guidance: are we nearly there yet? Stoeckli, Esther T Abstract: During nervous system development, neurons extend axons to reach their targets and form functional circuits. The faulty assembly or disintegration of such circuits results in disorders of the nervous system. Thus, understanding the molecular mechanisms that guide axons and lead to neural circuit formation is of interest not only to developmental neuroscientists but also for a better comprehension of neural disorders. Recent studies have demonstrated how crosstalk between different families of guidance receptors can regulate axonal navigation at choice points, and how changes in growth cone behaviour at intermediate targets require changes in the surface expression of receptors. These changes can be achieved by a variety of mechanisms, including transcription, translation, protein-protein interactions, and the specific trafficking of proteins and mRNAs. Here, I review these axon guidance mechanisms, highlighting the most recent advances in the field that challenge the textbook model of axon guidance. DOI: https://doi.org/10.1242/dev.151415 Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-166034 Journal Article Published Version Originally published at: Stoeckli, Esther T (2018). Understanding axon guidance: are we nearly there yet? Development, 145(10):dev151415. DOI: https://doi.org/10.1242/dev.151415 © 2018. Published by The Company of Biologists Ltd | Development (2018) 145, dev151415. doi:10.1242/dev.151415 REVIEW Understanding axon guidance: are we nearly there yet? Esther T. -
Promotion of Neurite Outgrowth and Axon Guidance in Spiral Ganglion Cells by Netrin-1
ORIGINAL ARTICLE Promotion of Neurite Outgrowth and Axon Guidance in Spiral Ganglion Cells by Netrin-1 Kenneth H. Lee, MD, PhD; Mark E. Warchol, PhD Objective: To identify the expression of netrin-1, a Results: Netrin-1 and DCC mRNA expression were found diffusible chemoattractive molecule, and its receptor, in the mouse organ of Corti and spiral ganglion cells by deleted in colorectal carcinoma (DCC), in the devel- RT-PCR. Application of exogenous netrin-1 led to a dos- opmentally mature inner ear, and to determine its age-dependent increase in neurite length in cultured spi- effects on axon length and guidance in cultured auditory ral ganglion cells. Chick acoustic ganglion cells cocul- neurons. tured with netrin-1–secreting cells demonstrated statistically significant preferential extension toward the source of netrin-1 (P =.04). Design: Messenger RNA (mRNA) and protein expres- sion of netrin-1 and DCC were identified in the organ of Conclusions: Netrin-1 and DCC are expressed in the or- Corti and spiral ganglion cells using reverse transcription– gan of Corti and spiral ganglion cells of developmen- polymerase chain reaction (RT-PCR) and fluorescence tally mature mice. Exogenous netrin-1 promotes dosage- immunohistochemical analysis. In vitro experiments ex- dependent neurite growth in vitro. Mature auditory amined the effects of exogenous netrin-1 on spiral gan- neurons preferentially direct neurite extension toward glion cell axon length. Auditory neurons were cocul- netrin-1 released in culture. These findings may lead to tured with a cell line secreting netrin-1 to determine the the development of strategies to optimize the interface effect on direction of axon extension. -
Integrinɑ3 Is Required for Late Postnatal Stability of Dendrite
6742 • The Journal of Neuroscience, April 17, 2013 • 33(16):6742–6752 Cellular/Molecular Integrin ␣3 Is Required for Late Postnatal Stability of Dendrite Arbors, Dendritic Spines and Synapses, and Mouse Behavior Meghan E. Kerrisk,1 Charles A. Greer,2,3,4 and Anthony J. Koleske1,2,4,5 Departments of 1Molecular Biophysics and Biochemistry, 2Neurobiology, and 3Neurosurgery, and 4Interdepartmental Neuroscience Program, Yale University, New Haven, Connecticut 06520, and 5Program in Cellular Neuroscience, Neurodegeneration, and Repair, Yale University, New Haven, Connecticut 06536 Most dendrite branches and a large fraction of dendritic spines in the adult rodent forebrain are stable for extended periods of time. Destabilization of these structures compromises brain function and is a major contributing factor to psychiatric and neurodegenerative diseases. Integrins are a class of transmembrane extracellular matrix receptors that function as ␣ heterodimers and activate signaling cascades regulating the actin cytoskeleton. Here we identify integrin ␣3 as a key mediator of neuronal stability. Dendrites, dendritic spines, and synapses develop normally in mice with selective loss of integrin ␣3 in excitatory forebrain neurons, reaching their mature sizes and densities through postnatal day 21 (P21). However, by P42, integrin ␣3 mutant mice exhibit significant reductions in hippocam- pal dendrite arbor size and complexity, loss of dendritic spine and synapse densities, and impairments in hippocampal-dependent behavior. Furthermore, gene-dosage experiments demonstrate that integrin ␣3 interacts functionally with the Arg nonreceptor tyrosine kinase to activate p190RhoGAP, which inhibits RhoA GTPase and regulates hippocampal dendrite and synapse stability and mouse behavior. Together, our data support a fundamental role for integrin ␣3 in regulating dendrite arbor stability, synapse maintenance, and proper hippocampal function. -
Turning of Retinal Growth Cones in a Netrin-1 Gradient Mediated by the Netrin Receptor DCC
Neuron, Vol. 19, 1211±1224, December, 1997, Copyright 1997 by Cell Press Turning of Retinal Growth Cones in a Netrin-1 Gradient Mediated by the Netrin Receptor DCC Jose R. de la Torre,* Veit H. HoÈ pker,² Guo-li Ming,² project to the midline (Harris et al., 1996; Mitchell et al., Mu-ming Poo,² Marc Tessier-Lavigne,*§ 1996). In addition to their apparent roles in attraction, ³ ² Ali Hemmati-Brivanlou, and Christine E. Holt k the netrins have been implicated as repellents of axons *Howard Hughes Medical Institute that migrate away from the midline in both C. elegans Departments of Anatomy and vertebrates (Colamarino and Tessier-Lavigne, 1995; and of Biochemistry and Biophysics Wadsworth et al., 1996; Varela-Echavarria et al., 1997). University of California Furthermore, genetic and biochemical evidence sug- San Francisco, California 94143-0452 gests that the attractive and repulsive actions of netrin ² Department of Biology proteins might involve different functional domains of University of California the netrin molecules and may be mediated by distinct San Diego, California 92039 receptor mechanisms (Hedgecock et al., 1990; Leung- ³ The Rockefeller University Hagesteijn et al., 1992; Chan et al., 1996; Keino-Masu New York, New York 10021-6399 et al., 1996; Kolodziej et al., 1996; Wadsworth et al., 1996; Ackerman et al., 1997; Leonardo et al., 1997). In addition to this role in midline guidance, studies in a Summary variety of vertebrate species have implicated netrins in guidance in many different regions of the nervous sys- Netrin-1 promotes outgrowth of axons in vitro through tem apart from midline regions (Kennedy et al., 1994; the receptor Deleted in Colorectal Cancer (DCC) and Serafini et al., 1996; Shirasaki et al., 1996; Lauderdale elicits turning of axons within embryonic explants et al., 1997; Livesey and Hunt, 1997; Me tin et al., 1997; when presented as a point source. -
Phosphorylation of DCC by ERK2 Is Facilitated By&Nbsp;Direct Docking of the Receptor P1 Domain To&Nbsp;The&Nbsp;Kina
Structure Article Phosphorylation of DCC by ERK2 Is Facilitated by Direct Docking of the Receptor P1 Domain to the Kinase Wenfu Ma,1,2 Yuan Shang,3 Zhiyi Wei,3 Wenyu Wen,1,2 Wenning Wang,1,2,* and Mingjie Zhang1,2,3,* 1Department of Chemistry 2Institute of Biomedical Sciences Fudan University, Shanghai, P.R. China 3Division of Life Science, Molecular Neuroscience Center, State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Clearwater Bay, Kowloon, Hong Kong, P. R. China *Correspondence: [email protected] (W.W.), [email protected] (M.Z.) DOI 10.1016/j.str.2010.08.011 SUMMARY domains or catalytic activity have been identified thus far for the DCC cytoplasmic domain. Both in vitro and in vivo studies Netrin receptor DCC plays critical roles in many have demonstrated that the attractive response of DCC to cellular processes, including axonal outgrowth and netrins specifically originates from the cytoplasmic domain of migration, angiogenesis, and apoptosis, but the the receptor, as a chimera DCC in which the extracellular portion molecular basis of DCC-mediated signaling is largely of DCC is fused with the cytoplasmic part of UNC5 elicited unclear. ERK2, a member of the MAPK family, is one repulsive responses to netrin (Hong et al., 1999; Keleman and of the few proteins known to be involved in DCC- Dickson, 2001). Due to the lack of catalytic motifs in its intracel- lular domain, DCC is thought to transmit its signal by binding to mediated signaling. Here, we report that ERK2 its downstream proteins. Identification of DCC intracellular directly interacts with DCC, and the ERK2-binding domain binding partners has helped in understanding netrin/ region was mapped to the conserved intracellular DCC downstream signaling events. -
Lysosomal Function and Axon Guidance: Is There a Meaningful Liaison?
biomolecules Review Lysosomal Function and Axon Guidance: Is There a Meaningful Liaison? Rosa Manzoli 1,2,†, Lorenzo Badenetti 1,3,4,†, Michela Rubin 1 and Enrico Moro 1,* 1 Department of Molecular Medicine, University of Padova, 35121 Padova, Italy; [email protected] (R.M.); [email protected] (L.B.); [email protected] (M.R.) 2 Department of Biology, University of Padova, 35121 Padova, Italy 3 Department of Women’s and Children’s Health, University of Padova, 35121 Padova, Italy 4 Pediatric Research Institute “Città della Speranza”, 35127 Padova, Italy * Correspondence: [email protected]; Tel.: +39-04-98276341 † These authors contributed equally to this paper. Abstract: Axonal trajectories and neural circuit activities strongly rely on a complex system of molec- ular cues that finely orchestrate the patterning of neural commissures. Several of these axon guidance molecules undergo continuous recycling during brain development, according to incompletely un- derstood intracellular mechanisms, that in part rely on endocytic and autophagic cascades. Based on their pivotal role in both pathways, lysosomes are emerging as a key hub in the sophisticated regulation of axonal guidance cue delivery, localization, and function. In this review, we will attempt to collect some of the most relevant research on the tight connection between lysosomal function and axon guidance regulation, providing some proof of concepts that may be helpful to understanding the relation between lysosomal storage disorders and neurodegenerative diseases. Citation: Manzoli, R.; Badenetti, L.; Keywords: axon guidance; lysosomal storage disorders; neuronal circuit Rubin, M.; Moro, E. Lysosomal Function and Axon Guidance: Is There a Meaningful Liaison? Biomolecules 2021, 11, 191. -
Discovery of a Functional Protein Complex of Netrin-4, Laminin 1 Chain
Discovery of a functional protein complex of netrin-4, laminin ␥1 chain, and integrin ␣61 in mouse neural stem cells Fernanda I. Staquicinia, Emmanuel Dias-Netoa, Jianxue Lib, Evan Y. Snyderc,d,e, Richard L. Sidmanb,1, Renata Pasqualinia,1, and Wadih Arapa,1 aDavid H. Koch Center, The University of Texas M. D. Anderson Cancer Center, Houston, TX 77030; bHarvard Medical School and Department of Neurology, Beth Israel Deaconess Medical Center, Boston, MA 02215; cStem Cell and Regeneration Program, Center for Neuroscience and Aging Research, Burnham Institute for Medical Research, La Jolla, CA 92037; dDepartment of Pediatrics, University of California, School of Medicine, La Jolla, CA 92093; and eSan Diego Consortium for Regenerative Medicine, La Jolla, CA 92037 Contributed by Richard L. Sidman, December 29, 2008 (sent for review October 13, 2008) Molecular and cellular interactions coordinating the origin and fate timeric complex functions as an integrated supramolecular of neural stem cells (NSCs) in the adult brain are far from being switch that regulates NSC fate. understood. We present a protein complex that controls prolifer- ation and migration of adult NSCs destined for the mouse olfactory Results and Discussion bulb (OB). Combinatorial selection based on phage display tech- Isolation of Peptides Binding to NSCs and Receptor Identification. We nology revealed a previously unrecognized complex between the profiled (16–18) the surface of a representative prototypical soluble protein netrin-4 and laminin ␥1 subunit that in turn clone of murine NSCs (C17.2) that can self-renew, differentiate activates an ␣61 integrin-mediated signaling pathway in NSCs. into all neural lineages, and populate developing or degenerating Differentiation of NSCs is accompanied by a decrease in netrin-4 regions of the central nervous system (19, 20). -
Slit Proteins: Molecular Guidance Cues for Cells Ranging from Neurons to Leukocytes Kit Wong, Hwan Tae Park*, Jane Y Wu* and Yi Rao†
583 Slit proteins: molecular guidance cues for cells ranging from neurons to leukocytes Kit Wong, Hwan Tae Park*, Jane Y Wu* and Yi Rao† Recent studies of molecular guidance cues including the Slit midline glial cells was thought to be abnormal [2,3]. family of secreted proteins have provided new insights into the Projection of the commissural axons was also abnormal: mechanisms of cell migration. Initially discovered in the nervous instead of crossing the midline once before projecting system, Slit functions through its receptor, Roundabout, and an longitudinally, the commissural axons from two sides of the intracellular signal transduction pathway that includes the nerve cord are fused at the midline in slit mutants [2,3]. Abelson kinase, the Enabled protein, GTPase activating proteins Because the midline glial cells are known to be important and the Rho family of small GTPases. Interestingly, Slit also in axon guidance, the commissural axon phenotype in slit appears to use Roundabout to control leukocyte chemotaxis, mutants was initially thought to be secondary to the cell- which occurs in contexts different from neuronal migration, differentiation phenotype [3]. suggesting a fundamental conservation of mechanisms guiding the migration of distinct types of somatic cells. In early 1999, results from three groups demonstrated independently that Slit functioned as an extracellular cue Addresses to guide axon pathfinding [4–6], to promote axon branching Department of Anatomy and Neurobiology, and *Departments of [7], and to control neuronal migration [8]. The functional Pediatrics and Molecular Biology and Pharmacology, Box 8108, roles of Slit in axon guidance and neuronal migration were Washington University School of Medicine, 660 S Euclid Avenue St Louis, soon supported by other studies in Drosophila [9] and in Missouri 63110, USA *e-mail: [email protected] vertebrates [10–14]. -
The Identification of Chromosomal Translocation, T(4;6)(Q22;Q15), In
The identification of chromosomal translocation, t(4;6)(q22;q15), in prostate cancer Yong-Jie Lu, Ling Shan, Laurence Ambroisine, Jeremy Clark, Rafael Yáñez-Muñoz, Gabrielle Fisher, Sakunthala Kudahetti, Jin-Shu Yang, Sanam Kia, Xueying Mao, et al. To cite this version: Yong-Jie Lu, Ling Shan, Laurence Ambroisine, Jeremy Clark, Rafael Yáñez-Muñoz, et al.. The identification of chromosomal translocation, t(4;6)(q22;q15), in prostate cancer. Prostate Cancer and Prostatic Diseases, Nature Publishing Group, 2010, n/a (n/a), pp.n/a-n/a. 10.1038/pcan.2010.2. hal-00510976 HAL Id: hal-00510976 https://hal.archives-ouvertes.fr/hal-00510976 Submitted on 23 Aug 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. The identification of chromosomal translocation, t(4;6)(q22;q15), in prostate cancer L Shan1, L Ambroisine2, J Clark3, RJ Yáñez-Muñoz1, G Fisher2, SC Kudahetti1, J Yang1, S Kia1, X Mao1, A Fletcher3, P Flohr3, S Edwards3, G Attard3, J De- Bono3, BD Young1, CS Foster4, V Reuter5, H Moller6, TD Oliver1, DM Berney1, P Scardino7, J Cuzick2, CS Cooper3, -
Netrin-1 Improves Adipose-Derived Stem Cell Proliferation, Migration, and Treatment Effect in Type 2 Diabetic Mice with Sciatic
Zhang et al. Stem Cell Research & Therapy (2018) 9:285 https://doi.org/10.1186/s13287-018-1020-0 RESEARCH Open Access Netrin-1 improves adipose-derived stem cell proliferation, migration, and treatment effect in type 2 diabetic mice with sciatic denervation Xing Zhang†, Jinbao Qin†, Xin Wang†, Xin Guo, Junchao Liu, Xuhui Wang, Xiaoyu Wu, Xinwu Lu* , Weimin Li* and Xiaobing Liu* Abstract Background: Diabetic peripheral neurovascular diseases (DPNVs) are complex, lacking effective treatment. Autologous/allogeneic transplantation of adipose-derived stem cells (ADSCs) is a promising strategy for DPNVs. Nonetheless, the transplanted ADSCs demonstrate unsatisfying viability, migration, adhesion, and differentiation in vivo, which reduce the treatment efficiency. Netrin-1 secreted as an axon guidance molecule and served as an angiogenic factor, demonstrating its ability in enhancing cell proliferation, migration, adhesion, and neovascularization. Methods: ADSCs acquired from adipose tissue were modified by Netrin-1 gene (NTN-1) using the adenovirus method (N-ADSCs) and proliferation, migration, adhesion, and apoptosis examined under high-glucose condition. The sciatic denervated mice (db/db) with type 2 diabetes mellitus (T2DM) were transplanted with N-ADSCs and treatment efficiency assessed based on the laser Doppler perfusion index, immunofluorescence, and histopathological assay. Also, the molecular mechanisms underlying Netrin-1-mediated proliferation, migration, adhesion, differentiation, proangiogenic capacity, and apoptosis of ADSCs were explored. Results: N-ADSCs improved the proliferation, migration, and adhesion and inhibited the apoptosis of ADSCs in vitro in the condition of high glucose. The N-ADSCs group demonstrated an elevated laser Doppler perfusion index in the ADSCs and control groups. N-ADSCs analyzed by immunofluorescence and histopathological staining demonstrated the distribution of the cells in the injected limb muscles, indicating chronic ischemia; capillaries and endothelium were formed by differentiation of N-ADSCs. -
Novel Candidate Genes of Thyroid Tumourigenesis Identified in Trk-T1 Transgenic Mice
Endocrine-Related Cancer (2012) 19 409–421 Novel candidate genes of thyroid tumourigenesis identified in Trk-T1 transgenic mice Katrin-Janine Heiliger*, Julia Hess*, Donata Vitagliano1, Paolo Salerno1, Herbert Braselmann, Giuliana Salvatore 2, Clara Ugolini 3, Isolde Summerer 4, Tatjana Bogdanova5, Kristian Unger 6, Gerry Thomas6, Massimo Santoro1 and Horst Zitzelsberger Research Unit of Radiation Cytogenetics, Helmholtz Zentrum Mu¨nchen, Ingolsta¨dter Landstr. 1, 85764 Neuherberg, Germany 1Istituto di Endocrinologia ed Oncologia Sperimentale del CNR, c/o Dipartimento di Biologia e Patologia Cellulare e Molecolare, Universita` Federico II, Naples 80131, Italy 2Dipartimento di Studi delle Istituzioni e dei Sistemi Territoriali, Universita` ‘Parthenope’, Naples 80133, Italy 3Division of Pathology, Department of Surgery, University of Pisa, 56100 Pisa, Italy 4Institute of Radiation Biology, Helmholtz Zentrum Mu¨nchen, 85764 Neuherberg, Germany 5Institute of Endocrinology and Metabolism, Academy of Medical Sciences of the Ukraine, 254114 Kiev, Ukraine 6Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital, London W12 0HS, UK (Correspondence should be addressed to H Zitzelsberger; Email: [email protected]) *(K-J Heiliger and J Hess contributed equally to this work) Abstract For an identification of novel candidate genes in thyroid tumourigenesis, we have investigated gene copy number changes in a Trk-T1 transgenic mouse model of thyroid neoplasia. For this aim, 30 thyroid tumours from Trk-T1 transgenics were investigated by comparative genomic hybridisation. Recurrent gene copy number alterations were identified and genes located in the altered chromosomal regions were analysed by Gene Ontology term enrichment analysis in order to reveal gene functions potentially associated with thyroid tumourigenesis. In thyroid neoplasms from Trk-T1 mice, a recurrent gain on chromosomal bands 1C4–E2.3 (10.0% of cases), and losses on 3H1–H3 (13.3%), 4D2.3–E2 (43.3%) and 14E4–E5 (6.7%) were identified.