Studies in the Mechanism of Transmission of Non
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Mesomeric Effect
Mesomeric effect +M effect of a methoxy group in an ether The mesomeric effect in chemistry is a property of substituents or functional groups in a chemical compound. It is defined as the polarity produced in the molecule by the interaction of two pi bonds or between a pi bond and lone –M effect of a carbonyl group in acrolein pair of electrons present on an adjacent atom. The effect is used in a qualitative way and describes the electron withdrawing or releasing properties of substituents based on relevant resonance structures and is symbolized by the letter M. The mesomeric effect is negative (–M) when the substituent is an electron-withdrawing group and the effect is positive (+M) when the substituent is an electron donating group. +M EFFECT ORDER : − –O > –NH2 > –NHCOR > –OR > –OCOR > –Ph > –CH3 > –F > –Cl > –Br > –I -M EFFECT ORDER : − –NO2 > –CN > –SO3H > –CHO > –COR > –COOCOR > –COOR > –COOH > –CONH2 > –COO The net electron flow from or to the substituent is determined also by the inductive effect. The mesomeric effect as a result of p-orbital overlap (resonance) has absolutely no effect on this inductive effect, as the inductive effect has purely to do with the electronegativity of the atoms and their topology in the molecule (which atoms are connected to which). The concepts of mesomeric effect, mesomerism and mesomer were introduced by Ingold in 1938 as an alternative to Pauling's synonymous concept of resonance.[1] "Mesomerism" in this context is often encountered in German and French literature, but in English literature the term "resonance" dominates. Contents Mesomerism in conjugated systems See also References External links Mesomerism in conjugated systems Mesomeric effect can be transmitted along any number of carbon atoms in a conjugated system. -
Cubane and Triptycene As Scaffolds in the Synthesis of Porphyrin Arrays
Cubane and Triptycene as Scaffolds in the Synthesis of Porphyrin Arrays Submitted by Gemma M. Locke B.A. (Mod.) Medicinal Chemistry Trinity College Dublin, Ireland A thesis submitted to the University of Dublin, Trinity College for the degree of Doctor of Philosophy Under the Supervision of Prof. Dr. Mathias O. Senge University of Dublin, Trinity College September 2020 Declaration I declare that this thesis has not been submitted as an exercise for a degree at this or any other university and it is entirely my own work. I agree to deposit this thesis in the University’s open access institutional repository or allow the Library to do so on my behalf, subject to Irish Copyright Legislation and Trinity College Library conditions of use and acknowledgement. I consent to the examiner retaining a copy of the thesis beyond the examining period, should they so wish. Furthermore, unpublished and/or published work of others, is duly acknowledged in the text wherever included. Signed: ____________________________________________ March 2020 Trinity College Dublin ii Summary The primary aim of this research was to synthesise multichromophoric arrays that are linked through rigid isolating units with the capacity to arrange the chromophores in a linear and fixed orientation. The electronically isolated multichromophoric systems could then ultimately be tested in electron transfer studies for their applicability as photosynthesis mimics. Initially, 1,4-diethynylcubane was employed as the rigid isolating scaffold and one to two porphyrins were reacted with it in order to obtain the coupled product(s). Pd-catalysed Sonogashira cross-coupling reactions were used to try and achieve these bisporphyrin complexes. -
23.5 Basicity and Acidity of Amines
23_BRCLoudon_pgs5-0.qxd 12/8/08 1:22 PM Page 1122 1122 CHAPTER 23 • THE CHEMISTRY OF AMINES alkylamines, this resonance occurs at rather small chemical shift—typically around d 1. In aromatic amines, this resonance is at greater chemical shift, as in the second of the preceding examples. Like the OH protons of alcohols, phenols, and carboxylic acids, the NH protons of amines under most conditions undergo rapid exchange (Secs. 13.6 and 13.7D). For this reason, split- ting between the amine N H and adjacent C H groups is usually not observed. Thus, in the NMR spectrum of diethylamine,L the N H resonanceL is a singlet rather than the triplet ex- pected from splitting by the adjacent CHL2 protons. In some amine samples, the N H resonance is broadened and, like the OL H protonL of alcohols, it can be obliterated fromL the spectrum by exchange with D2O (the “DL2O shake,” p. 611). The characteristic 13C NMR absorptions of amines are those of the a-carbons—the carbons attached directly to the nitrogen. These absorptions occur in the d 30–50 chemical-shift range. As expected from the relative electronegativities of oxygen and nitrogen, these shifts are somewhat less than the a-carbon shifts of ethers. PROBLEMS 23.4 Identify the compound that has an M 1 ion at mÜz 136 in its CI mass spectrum, an IR 1 + = absorption at 3279 cm_ , and the following NMR spectrum: d 0.91 (1H, s), d 1.07 (3H, t, J 7Hz), d 2.60 (2H, q, J 7Hz), d 3.70 (2H, s), d 7.18 (5H, apparent s). -
And 5,10,15,20-Tetraalkylporphyrins: Implications For
336 J. Am. Chem. SOC.1988, 110, 336-342 values being Ai,(IH) = 127.2 G and gs0= 2.0042. Since these intermediates produced under reactive laser sputtering21and other results are very similar to those calculated from the neon data, high-energy condition^.^' The use of the neon ESR matrix namely, Ais0(lH) = 128.6 G and giso= 2.0038, it is reasonable technique for studying ion products formed injon-neutral reactions to conclude that these parameters are characteristic of the un- has also been demonstrated for the following reactions which are complexed cation irrespective of the nature of the matrix. Con- important in stratospheric chemistry: CO + CO' -+ C202+,42 sequently, the significantly different parameters observed for the N2 + N2+- N4+,43N2 + CO+ - N2CO+,'and O2 + 02+- cation above 120 K in the CFC1, matrix (Table 111) now become 04+.44 anomalous for a dissociated cation. On the other hand, these 120 K parameters are just what would be expected if the complex Acknowledgment. The neon matrix ESR experiments were persists and the loss of fine structure results simply from a motional conducted at Furman University with support from the National averaging of the 35Cl hyperfine tensor components. Science Foundation (CHE-8508085), the General Electric Except for a recent investigation of the cubane radical cation Foundation, the Amoco Foundation, and Research Corporation. (C8H8+),39the acetaldehyde ion is the largest cation studied to A new ESR spectrometer was made possible by a chemistry date by the neon matrix ESR method. Given the high resolution equipment grant to Furman University from the Pew Memorial that can be achieved in neon and the chance of preferential Trust. -
LIST of PUBLICATIONS of JOSEF MICHL B: Book P: Patent C
LIST OF PUBLICATIONS OF JOSEF MICHL B: Book P: Patent C: Communication R: Review or Chapter in a Book P 1. Kopecký, J.; Michl, J. "Zpùsob výroby pyrrolo(2,3-d)-pyrimidinù", Czechoslovak patent no. 97821, August 11, 1959. C 2. Zuman, P.; Michl, J. "Role of Keto-Enol Tautomerism in the Polarographical Reduction of Some Carbonyl Compounds", Nature 1961, 192, 655. C 3. Horák, V.; Michl, J.; Zuman, P. "A Contribution to the Studies of Elimination Reactions of Mannich Bases, Using Polarographic Method", Tetrahedron Lett. 1961, 744. C 4. Zahradník, R.; Michl, J.; Koutecký, J. "Fluoranthene-like Hydrocarbons: MO-LCAO Study of Electronic Spectra, Charge-Transfer Spectra and Polarographic Reduction", J. Chem. Soc. 1963, 4998. 5. Koutecký, J.; Hochman, P.; Michl, J. "Calculation of Electronic Spectra of Non-Alternant Conjugated Hydrocarbons by the Semiempirical Method of Limited Configuration Interaction", J. Chem. Phys. 1964, 40, 2439. 6. Zahradník, R.; Michl, J.; Koutecký, J. "Tables of Quantum Chemical Data. II. Energy Characteristics of Some Non-Alternant Hydrocarbons", Collect. Czech. Chem. Commun. 1964, 29, 1932. 7. Zahradník, R.; Michl, J.; Koutecký, J. "Tables of Quantum Chemical Data. III. Molecular Orbitals of Some Fluoranthene-like Hydrocarbons, Cyclopentadienyl, and Some of its Benzo and Naphtho Derivatives", Collect. Czech. Chem. Commun. 1964, 29, 3184. 8. Zahradník, R.; Michl, J. "Electronic Structure of Non-Alternant Hydrocarbons, Their Analogues and Derivatives. Introductory Remarks", Collect. Czech. Chem. Commun. 1965, 30, 515. 9. Zahradník, R.; Michl, J. "Electronic Structure of Non-Alternant Hydrocarbons, Their Analogues and Derivatives. I. A Theoretical Treatment of Reid's Hydrocarbons", Collect. Czech. Chem. Commun. -
Comparative Strengths of Four Organic Bases in Benzene1 Marion Maclean Davis and Hannah B
Journal of Research of the National Bureau of Standards Vol. 48, No. 5, May 1952 Research Paper 2326 Comparative Strengths of Four Organic Bases in Benzene1 Marion Maclean Davis and Hannah B. Hetzer Spectropho to metric studies have shown that the reaction of the base 1,3-di-o-tolylguani- dine with the acidic indicator dye bromophthalein magenta E (tetrabromophenolphthalein ethyl ester) in benzene at 25° C, like the reactions of 1,3-diphenylguanidine and 1,2,3-tri- phenylguanidine with the same indicator, can be represented by the following two equations: B + HA ^ BH+.A- (colorless base) (yellow acid) (magenta salt) BH+.A- + B^(BHB)+A- (blue salt) For ditolylguanidine, the equilibrium constants K\ and K2 for the first and second reactions, respectively, are estimated to be 1.1 X106 and 6.4. These values are compared with values for Ki and K2 previously found for di- and triphenylguanidine and the value of Ki found for triethylamine. The values for K\, which measure the relative tendencies of the bases to form salts with the indicator acid in benzene, would be expected to parallel the ionic dissociation constants of the bases in water. However, the parallelism is not good. Diphenylguanidine and ditolylguariidine, which are presumed to be weaker bases in water than triethylamine, are much more reactive in benzene. The results demonstrate how misleading the aqueous dissociation constants may be as a gage of the relative reactivities of bases in a nonaqueous solvent such as benzene. Steric and solvation effects are discussed. 1. Introduction i optical instruments then available, it was possible to make only roughly quantitative comparisons of Hantzsch and his coworkers were the first to J acidic strengths. -
Structure and Bonding of New Boron and Carbon Superpolyhedra
Structural Chemistry (2019) 30:805–814 https://doi.org/10.1007/s11224-019-1279-5 ORIGINAL RESEARCH Structure and bonding of new boron and carbon superpolyhedra Olga A. Gapurenko1 & Ruslan M. Minyaev1 & Nikita S. Fedik2 & Vitaliy V. Koval1 & Alexander I. Boldyrev2 & Vladimir I. Minkin1 Received: 16 November 2018 /Accepted: 1 January 2019 /Published online: 10 January 2019 # Springer Science+Business Media, LLC, part of Springer Nature 2019 Abstract Using the DFT methods, we computationally predict the stability of cage compounds E4nRn (E = B, C; R = H, F; n = 4, 8, 12, 24) based on Platonic bodies and Archimedean polyhedrons in which all vertices are replaced by tetrahedral E4R fragments. Cage compounds B60R12 and C60 with pyramidal units B5RorC5 are also examined and it is shown that only boron compounds are stable. The nature of chemical bonding in the discussed compounds is analyzed using the AdNDP and NBO methods. The hydrocarbons have classical 2c-2e C-C σ-bonds, while the boron compounds are formed by the polyhedral units with the delocalized multicenter bonds which connected three and more boron atoms. The new example of spherical aromaticity accord- 2 ing to the 2(N+1) rule in the case of B16F4 with multicenter 16c-2e bonds are revealed. Stable compound B60H12 contains 12 5c- 2e B-B bonds. Keywords Сage clusters . Chemical bonding . 3c-2e bond . Spherical aromaticity . AdNDP . NBO Construction of novel allotropic forms of carbon based on was proposed [1] as the system with the same symmetry as the tetrahedrane- and cubane-like building blocks was pro- sp3-carbon to replace the carbon atoms in the diamond posed by Burdett and Lee [1] and by Johnston and lattice. -
Advanced Physical Techniques in Inorganic Chemistry: Probing Small Molecule Activation
Advanced Physical Techniques in Inorganic Chemistry: Probing Small Molecule Activation The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Anderson, Bryce L. 2016. Advanced Physical Techniques in Inorganic Chemistry: Probing Small Molecule Activation. Doctoral dissertation, Harvard University, Graduate School of Arts & Sciences. Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:33493292 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Advanced Physical Techniques in Inorganic Chemistry: Probing Small Molecule Activation A dissertation presented by Bryce L. Anderson To The Department of Chemistry and Chemical Biology in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Chemistry Harvard University Cambridge, Massachusetts May 2016 © 2016 Bryce L. Anderson All rights reserved Dissertation Advisor: Professor Daniel G. Nocera Bryce L. Anderson Advanced Physical Techniques in Inorganic Chemistry: Probing Small Molecule Activation Abstract Robust and efficient catalysts are necessary for realizing chemical energy storage as a solution for the intermittency associated with renewable energy sources. To aid in the development of such catalysts, physical methods are used to probe the photochemistry of small molecule activation in the context of solar-to-fuels cycles. Three systems are studied in the context of HX splitting (X=Br, Cl): polypyridyl nickel complexes, NiX3(LL) (LL = bidentate phosphine) complexes, and dirhodium phosphazane complexes. -
Pd/S,O-Ligand Catalysed Regioselective C–H Olefination of Anisole Derivates
Bachelor Thesis Scheikunde Pd/S,O-ligand Catalysed Regioselective C–H Olefination of Anisole Derivates door Rianne van Diest 14 december 2020 Studentnummer 11677635 Onderzoeksinstituut Verantwoordelijk docent Van ’t Hoff Institute for Molecular Sciences Dr. M.A. (Tati) Fernández Ibáñez Onderzoeksgroep Begeleider Synthetic Organic Chemistry Verena (Vivi) Sukowski 1 TABLE OF CONTENTS List of abbreviations ............................................................................................................................. 3 Abstract .................................................................................................................................................. 4 Popular scientific summary ................................................................................................................. 4 1. Introduction ....................................................................................................................................... 5 1.1 C–H activation as attractive strategy for green chemistry ............................................................ 5 1.2 Improving the selectivity of C–H activation with ligands ............................................................ 6 1.3 C–H olefination of anisole derivates ............................................................................................. 7 2. Background information .................................................................................................................. 9 2.1 C–H activation mechanisms ......................................................................................................... -
Chapter 16 the Chemistry of Benzene and Its Derivatives
Instructor Supplemental Solutions to Problems © 2010 Roberts and Company Publishers Chapter 16 The Chemistry of Benzene and Its Derivatives Solutions to In-Text Problems 16.1 (b) o-Diethylbenzene or 1,2-diethylbenzene (d) 2,4-Dichlorophenol (f) Benzylbenzene or (phenylmethyl)benzene (also commonly called diphenylmethane) 16.2 (b) (d) (f) (h) 16.3 Add about 25 °C per carbon relative to toluene (110.6 C; see text p. 743): (b) propylbenzene: 161 °C (actual: 159 °C) 16.4 The aromatic compound has NMR absorptions with greater chemical shift in each case because of the ring current (Fig. 16.2, text p. 745). (b) The chemical shift of the benzene protons is at considerably greater chemical shift because benzene is aromatic and 1,4-cyclohexadiene is not. 16.6 (b) Among other features, the NMR spectrum of 1-bromo-4-ethylbenzene has a typical ethyl quartet and a typical para-substitution pattern for the ring protons, as shown in Fig. 16.3, text p. 747, whereas the spectrum of (2- bromoethyl)benzene should show a pair of triplets for the methylene protons and a complex pattern for the ring protons. If this isn’t enough to distinguish the two compounds, the integral of the ring protons relative to the integral of the remaining protons is different in the two compounds. 16.7 (b) The IR spectrum indicates the presence of an OH group, and the chemical shift of the broad NMR resonance (d 6.0) suggests that this could be a phenol. The splitting patterns of the d 1.17 and d 2.58 resonances show that the compound also contains an ethyl group, and the splitting pattern of the ring protons shows that the compound is a para-disubstituted benzene derivative. -
Synthetic Advances in the C‐H Activation of Rigid Scaffold Molecules
Synthesis Review Synthetic Advances in the C‐H Activation of Rigid Scaffold Molecules Nitika Grovera Mathias O. Senge*a a School of Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute, 152–160 Pearse Street, Dublin 2, Ireland [email protected] Dedicated to Prof. Dr. Henning Hopf Received: only recall the epic endeavors involved in Eaton’s cubane Accepted: Published online: synthesis,3 Parquette’s preparation of dodecahedrane, DOI: Prinzbach’s pagodane route thereto, or Maier’s synthesis of Abstract The remarkable structural and electronic properties of rigid non‐ tetra-tert-butyltetrahedrane.4 conjugated hydrocarbons afford attractive opportunities to design molecular building blocks for both medicinal and material applications. The bridgehead positions provide the possibility to append diverse functional groups at specific angles and in specific orientations. The current review summarizes the synthetic development in CH functionalization of the three rigid scaffolds namely: (a) cubane, (b) bicyclo[1.1.1]pentane (BCP), (c) adamantane. 1 Introduction 2 Cubane 2.1 Cubane Synthesis 2.2 Cubane Functionalization 3 BCP 3.1 BCP Synthesis 3.2 BCP Functionalization 4 Adamantane 4.1 Adamantane Synthesis 4.2 Adamantane Functionalization 5 Conclusion and Outlook Key words Cubane, bicyclo[1.1.1]pentane, adamantane, rigid scaffolds, CH‐ functionalization. Figure 1 The structures of cubane, BCP and adamantane and the five platonic hydrocarbon systems. The fascinating architecture of these systems significantly 1 Introduction differs from scaffolds realized in natural compounds. Hence, they attracted considerable attention from synthetic and The practice of synthetic organic chemistry of non-natural physical organic chemists to investigate their properties and to compounds with rigid organic skeletons provides a deep establish possible uses.3,5 Significantly, over the past twenty understanding of bonding and reactivity. -
Cheminformatics for Genome-Scale Metabolic Reconstructions
CHEMINFORMATICS FOR GENOME-SCALE METABOLIC RECONSTRUCTIONS John W. May European Molecular Biology Laboratory European Bioinformatics Institute University of Cambridge Homerton College A thesis submitted for the degree of Doctor of Philosophy June 2014 Declaration This thesis is the result of my own work and includes nothing which is the outcome of work done in collaboration except where specifically indicated in the text. This dissertation is not substantially the same as any I have submitted for a degree, diploma or other qualification at any other university, and no part has already been, or is currently being submitted for any degree, diploma or other qualification. This dissertation does not exceed the specified length limit of 60,000 words as defined by the Biology Degree Committee. This dissertation has been typeset using LATEX in 11 pt Palatino, one and half spaced, according to the specifications defined by the Board of Graduate Studies and the Biology Degree Committee. June 2014 John W. May to Róisín Acknowledgements This work was carried out in the Cheminformatics and Metabolism Group at the European Bioinformatics Institute (EMBL-EBI). The project was fund- ed by Unilever, the Biotechnology and Biological Sciences Research Coun- cil [BB/I532153/1], and the European Molecular Biology Laboratory. I would like to thank my supervisor, Christoph Steinbeck for his guidance and providing intellectual freedom. I am also thankful to each member of my thesis advisory committee: Gordon James, Julio Saez-Rodriguez, Kiran Patil, and Gos Micklem who gave their time, advice, and guidance. I am thankful to all members of the Cheminformatics and Metabolism Group.