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Data Preparation & Descriptive Statistics
Data Preparation & Descriptive Statistics (ver. 2.4) Oscar Torres-Reyna Data Consultant [email protected] PU/DSS/OTR http://dss.princeton.edu/training/ Basic definitions… For statistical analysis we think of data as a collection of different pieces of information or facts. These pieces of information are called variables. A variable is an identifiable piece of data containing one or more values. Those values can take the form of a number or text (which could be converted into number) In the table below variables var1 thru var5 are a collection of seven values, ‘id’ is the identifier for each observation. This dataset has information for seven cases (in this case people, but could also be states, countries, etc) grouped into five variables. id var1 var2 var3 var4 var5 1 7.3 32.27 0.1 Yes Male 2 8.28 40.68 0.56 No Female 3 3.35 5.62 0.55 Yes Female 4 4.08 62.8 0.83 Yes Male 5 9.09 22.76 0.26 No Female 6 8.15 90.85 0.23 Yes Female 7 7.59 54.94 0.42 Yes Male PU/DSS/OTR Data structure… For data analysis your data should have variables as columns and observations as rows. The first row should have the column headings. Make sure your dataset has at least one identifier (for example, individual id, family id, etc.) id var1 var2 var3 var4 var5 First row should have the variable names 1 7.3 32.27 0.1 Yes Male 2 8.28 40.68 0.56 No Female Cross-sectional data 3 3.35 5.62 0.55 Yes Female 4 4.08 62.8 0.83 Yes Male 5 9.09 22.76 0.26 No Female 6 8.15 90.85 0.23 Yes Female 7 7.59 54.94 0.42 Yes Male id year var1 var2 var3 1 2000 7 74.03 0.55 Group 1 1 2001 2 4.6 0.44 At least one identifier 1 2002 2 25.56 0.77 2 2000 7 59.52 0.05 Cross-sectional time series data Group 2 2 2001 2 16.95 0.94 or panel data 2 2002 9 1.2 0.08 3 2000 9 85.85 0.5 Group 3 3 2001 3 98.85 0.32 3 2002 3 69.2 0.76 PU/DSS/OTR NOTE: See: http://www.statistics.com/resources/glossary/c/crossdat.php Data format (ASCII)… ASCII (American Standard Code for Information Interchange). -
Full Document
R&D Centre for Mobile Applications (RDC) FEE, Dept of Telecommunications Engineering Czech Technical University in Prague RDC Technical Report TR-13-4 Internship report Evaluation of Compressibility of the Output of the Information-Concealing Algorithm Julien Mamelli, [email protected] 2nd year student at the Ecole´ des Mines d'Al`es (N^ımes,France) Internship supervisor: Luk´aˇsKencl, [email protected] August 2013 Abstract Compression is a key element to exchange files over the Internet. By generating re- dundancies, the concealing algorithm proposed by Kencl and Loebl [?], appears at first glance to be particularly designed to be combined with a compression scheme [?]. Is the output of the concealing algorithm actually compressible? We have tried 16 compression techniques on 1 120 files, and the result is that we have not found a solution which could advantageously use repetitions of the concealing method. Acknowledgments I would like to express my gratitude to my supervisor, Dr Luk´aˇsKencl, for his guidance and expertise throughout the course of this work. I would like to thank Prof. Robert Beˇst´akand Mr Pierre Runtz, for giving me the opportunity to carry out my internship at the Czech Technical University in Prague. I would also like to thank all the members of the Research and Development Center for Mobile Applications as well as my colleagues for the assistance they have given me during this period. 1 Contents 1 Introduction 3 2 Related Work 4 2.1 Information concealing method . 4 2.2 Archive formats . 5 2.3 Compression algorithms . 5 2.3.1 Lempel-Ziv algorithm . -
Encryption Introduction to Using 7-Zip
IT Services Training Guide Encryption Introduction to using 7-Zip It Services Training Team The University of Manchester email: [email protected] www.itservices.manchester.ac.uk/trainingcourses/coursesforstaff Version: 5.3 Training Guide Introduction to Using 7-Zip Page 2 IT Services Training Introduction to Using 7-Zip Table of Contents Contents Introduction ......................................................................................................................... 4 Compress/encrypt individual files ....................................................................................... 5 Email compressed/encrypted files ....................................................................................... 8 Decrypt an encrypted file ..................................................................................................... 9 Create a self-extracting encrypted file .............................................................................. 10 Decrypt/un-zip a file .......................................................................................................... 14 APPENDIX A Downloading and installing 7-Zip ................................................................. 15 Help and Further Reference ............................................................................................... 18 Page 3 Training Guide Introduction to Using 7-Zip Introduction 7-Zip is an application that allows you to: Compress a file – for example a file that is 5MB can be compressed to 3MB Secure the -
Pack, Encrypt, Authenticate Document Revision: 2021 05 02
PEA Pack, Encrypt, Authenticate Document revision: 2021 05 02 Author: Giorgio Tani Translation: Giorgio Tani This document refers to: PEA file format specification version 1 revision 3 (1.3); PEA file format specification version 2.0; PEA 1.01 executable implementation; Present documentation is released under GNU GFDL License. PEA executable implementation is released under GNU LGPL License; please note that all units provided by the Author are released under LGPL, while Wolfgang Ehrhardt’s crypto library units used in PEA are released under zlib/libpng License. PEA file format and PCOMPRESS specifications are hereby released under PUBLIC DOMAIN: the Author neither has, nor is aware of, any patents or pending patents relevant to this technology and do not intend to apply for any patents covering it. As far as the Author knows, PEA file format in all of it’s parts is free and unencumbered for all uses. Pea is on PeaZip project official site: https://peazip.github.io , https://peazip.org , and https://peazip.sourceforge.io For more information about the licenses: GNU GFDL License, see http://www.gnu.org/licenses/fdl.txt GNU LGPL License, see http://www.gnu.org/licenses/lgpl.txt 1 Content: Section 1: PEA file format ..3 Description ..3 PEA 1.3 file format details ..5 Differences between 1.3 and older revisions ..5 PEA 2.0 file format details ..7 PEA file format’s and implementation’s limitations ..8 PCOMPRESS compression scheme ..9 Algorithms used in PEA format ..9 PEA security model .10 Cryptanalysis of PEA format .12 Data recovery from -
Metadefender Core V4.12.2
MetaDefender Core v4.12.2 © 2018 OPSWAT, Inc. All rights reserved. OPSWAT®, MetadefenderTM and the OPSWAT logo are trademarks of OPSWAT, Inc. All other trademarks, trade names, service marks, service names, and images mentioned and/or used herein belong to their respective owners. Table of Contents About This Guide 13 Key Features of Metadefender Core 14 1. Quick Start with Metadefender Core 15 1.1. Installation 15 Operating system invariant initial steps 15 Basic setup 16 1.1.1. Configuration wizard 16 1.2. License Activation 21 1.3. Scan Files with Metadefender Core 21 2. Installing or Upgrading Metadefender Core 22 2.1. Recommended System Requirements 22 System Requirements For Server 22 Browser Requirements for the Metadefender Core Management Console 24 2.2. Installing Metadefender 25 Installation 25 Installation notes 25 2.2.1. Installing Metadefender Core using command line 26 2.2.2. Installing Metadefender Core using the Install Wizard 27 2.3. Upgrading MetaDefender Core 27 Upgrading from MetaDefender Core 3.x 27 Upgrading from MetaDefender Core 4.x 28 2.4. Metadefender Core Licensing 28 2.4.1. Activating Metadefender Licenses 28 2.4.2. Checking Your Metadefender Core License 35 2.5. Performance and Load Estimation 36 What to know before reading the results: Some factors that affect performance 36 How test results are calculated 37 Test Reports 37 Performance Report - Multi-Scanning On Linux 37 Performance Report - Multi-Scanning On Windows 41 2.6. Special installation options 46 Use RAMDISK for the tempdirectory 46 3. Configuring Metadefender Core 50 3.1. Management Console 50 3.2. -
Steganography and Vulnerabilities in Popular Archives Formats.| Nyxengine Nyx.Reversinglabs.Com
Hiding in the Familiar: Steganography and Vulnerabilities in Popular Archives Formats.| NyxEngine nyx.reversinglabs.com Contents Introduction to NyxEngine ............................................................................................................................ 3 Introduction to ZIP file format ...................................................................................................................... 4 Introduction to steganography in ZIP archives ............................................................................................. 5 Steganography and file malformation security impacts ............................................................................... 8 References and tools .................................................................................................................................... 9 2 Introduction to NyxEngine Steganography1 is the art and science of writing hidden messages in such a way that no one, apart from the sender and intended recipient, suspects the existence of the message, a form of security through obscurity. When it comes to digital steganography no stone should be left unturned in the search for viable hidden data. Although digital steganography is commonly used to hide data inside multimedia files, a similar approach can be used to hide data in archives as well. Steganography imposes the following data hiding rule: Data must be hidden in such a fashion that the user has no clue about the hidden message or file's existence. This can be achieved by -
Improved Neural Network Based General-Purpose Lossless Compression Mohit Goyal, Kedar Tatwawadi, Shubham Chandak, Idoia Ochoa
JOURNAL OF LATEX CLASS FILES, VOL. 14, NO. 8, AUGUST 2015 1 DZip: improved neural network based general-purpose lossless compression Mohit Goyal, Kedar Tatwawadi, Shubham Chandak, Idoia Ochoa Abstract—We consider lossless compression based on statistical [4], [5] and generative modeling [6]). Neural network based data modeling followed by prediction-based encoding, where an models can typically learn highly complex patterns in the data accurate statistical model for the input data leads to substantial much better than traditional finite context and Markov models, improvements in compression. We propose DZip, a general- purpose compressor for sequential data that exploits the well- leading to significantly lower prediction error (measured as known modeling capabilities of neural networks (NNs) for pre- log-loss or perplexity [4]). This has led to the development of diction, followed by arithmetic coding. DZip uses a novel hybrid several compressors using neural networks as predictors [7]– architecture based on adaptive and semi-adaptive training. Unlike [9], including the recently proposed LSTM-Compress [10], most NN based compressors, DZip does not require additional NNCP [11] and DecMac [12]. Most of the previous works, training data and is not restricted to specific data types. The proposed compressor outperforms general-purpose compressors however, have been tailored for compression of certain data such as Gzip (29% size reduction on average) and 7zip (12% size types (e.g., text [12] [13] or images [14], [15]), where the reduction on average) on a variety of real datasets, achieves near- prediction model is trained in a supervised framework on optimal compression on synthetic datasets, and performs close to separate training data or the model architecture is tuned for specialized compressors for large sequence lengths, without any the specific data type. -
Chapter 11. Media Formats for Data Submission and Archive 11-1
Chapter 11. Media Formats for Data Submission and Archive 11-1 Chapter 11. Media Formats for Data Submission and Archive This standard identifies the physical media formats to be used for data submission or delivery to the PDS or its science nodes. The PDS expects flight projects to deliver all archive products on magnetic or optical media. Electronic delivery of modest volumes of special science data products may be negotiated with the science nodes. Archive Planning - During archive planning, the data producer and PDS will determine the medium (or media) to use for data submission and archiving. This standard lists the media that are most commonly used for submitting data to and subsequently archiving data with the PDS. Delivery of data on media other than those listed here may be negotiated with the PDS on a case- by-case basis. Physical Media for Archive - For archival products only media that conform to the appropriate International Standards Organization (ISO) standard for physical and logical recording formats may be used. 1. The preferred data delivery medium is the Compact Disk (CD-ROM or CD-Recordable) produced in ISO 9660 format, using Interchange Level 1, subject to the restrictions listed in Section 10.1.1. 2. Compact Disks may be produced in ISO 9660 format using Interchange Level 2, subject to the restrictions listed in Section 10.1.2. 3. Digital Versatile Disk (DVD-ROM or DVD-R) should be produced in UDF-Bridge format (Universal Disc Format) with ISO 9660 Level 1 or Level 2 compatibility. Because of hardware compatibility and long-term stability issues, the use of 12-inch Write Once Read Many (WORM) disk, 8-mm Exabyte tape, 4-mm DAT tape, Bernoulli Disks, Zip disks, Syquest disks and Jaz disks is not recommended for archival use. -
User Commands GZIP ( 1 ) Gzip, Gunzip, Gzcat – Compress Or Expand Files Gzip [ –Acdfhllnnrtvv19 ] [–S Suffix] [ Name ... ]
User Commands GZIP ( 1 ) NAME gzip, gunzip, gzcat – compress or expand files SYNOPSIS gzip [–acdfhlLnNrtvV19 ] [– S suffix] [ name ... ] gunzip [–acfhlLnNrtvV ] [– S suffix] [ name ... ] gzcat [–fhLV ] [ name ... ] DESCRIPTION Gzip reduces the size of the named files using Lempel-Ziv coding (LZ77). Whenever possible, each file is replaced by one with the extension .gz, while keeping the same ownership modes, access and modification times. (The default extension is – gz for VMS, z for MSDOS, OS/2 FAT, Windows NT FAT and Atari.) If no files are specified, or if a file name is "-", the standard input is compressed to the standard output. Gzip will only attempt to compress regular files. In particular, it will ignore symbolic links. If the compressed file name is too long for its file system, gzip truncates it. Gzip attempts to truncate only the parts of the file name longer than 3 characters. (A part is delimited by dots.) If the name con- sists of small parts only, the longest parts are truncated. For example, if file names are limited to 14 characters, gzip.msdos.exe is compressed to gzi.msd.exe.gz. Names are not truncated on systems which do not have a limit on file name length. By default, gzip keeps the original file name and timestamp in the compressed file. These are used when decompressing the file with the – N option. This is useful when the compressed file name was truncated or when the time stamp was not preserved after a file transfer. Compressed files can be restored to their original form using gzip -d or gunzip or gzcat. -
Genomic Data Compression
Genomic data compression S. Cenk Sahinalp Bogaz’da Yaz Okulu 2018 Genome&storage&and&communication:&the&need • Research:)massive)genome)projects (e.g.)PCAWG))require)to)exchange) 10000s)of)genomes. • Need)to)cover)>200)cancer)types,)many)subtypes. • Within)PCAWG)TCGA)to)sequence)11K)patients)covering)33)cancer) types.)ICGC)to)cover)50)cancer)types)>15PB)data)at)The)Cancer) Genome)Collaboratory • Clinic:)$100s/genome (e.g.)NovaSeq))enable)sequencing)to)be)a) standard)tool)for)pathology • PCAWG)estimates)that)250M+)individuals)will)be)sequenced)by)2030 Current'needs • Typical(technology:(Illumina NovaSeq 1009400(bp reads,(2509500GB( uncompressed(data(for(high(coverage human(genome,(high(redundancy • 40%(of(the(human(genome(is(repetitive((mobile(genetic(elements,( centromeric DNA,(segmental(duplications,(etc.) • Upload/download:(55(hrs on(a(10Mbit(consumer(line;(5.5(hrs on(a( 100Mbit(high(speed(connection • Technologies(under(development:(expensive,(longer(reads,(higher(error( (PacBio,(Nanopore)(– lower(redundancy(and(higher(error(rates(limit( compression File%formats • Raw read'data:'FASTQ/FASTA'– dominant'fields:'(read'name,'sequence,' quality'score) • Mapped read'data:'SAM/BAM'– reads'reordered'based'on'mapping' locus'on'a'reference genome'(not'suitaBle'for'metagenomics,'organisms' with'no'reference) • Key'decisions'to'Be'made: • Each'format'can'Be'compressed'through'specialized'methods'– should' there'Be'a'standardized'format'for'compressed'genomes? • Better'file'formats'Based'on'mapping'loci'on'sequence'graphs' representing'common'variants'in'a'panJgenomic'reference? -
CDP Standard Edition Windows Getting Started Guide Version 3.18
Windows CDP Standard Edition Getting Started Guide, Version 3.18 CDP Standard Edition Windows Getting Started Guide Version 3.18 1 Windows CDP Standard Edition Getting Started Guide, Version 3.18 Windows CDP Standard Edition Getting Started Guide READ ME FIRST Welcome to the R1Soft - Windows CDP 3.0 Standard Edition - Getting Started Guide The purpose of this manual is to provide you with complete instructions on how to install and set up the R1Soft CDP 3.0 software, Standard Edition on Windows. To go to a specific topic in a particular section, click on the topic name in the Table of Contents. The "Common Questions" section is an archive of typical questions to help you get started with CDP 3 Standard Edition. Note CDP 3.0 comes in three (3) Editions: Standard, Advanced and Enterprise. This Guide describes the installation and set up of the Standard Edition. 2 Windows CDP Standard Edition Getting Started Guide, Version 3.18 Table of Contents 1 About CDP Standard Edition 3.0 ....................................................................................... 4 2 How to get it ...................................................................................................................... 5 2.1 Obtaining Windows CDP Standard Edition ........................................................... 5 3 Installing the CDP Server .................................................................................................. 8 3.1 Installing Standard Edition on Windows ................................................................ 8 -
How to 'Zip and Unzip' Files
How to 'zip and unzip' files The Windows 10 operating system provides a very easy way to zip-up any file (or folder) you want by using a utility program called 7-zip (Seven Zip). The program is integrated in the context menu which you get when you right-click on anything selected. Here are the basic steps you need to take in order to: Zip a file and create an archive 1. Open a folder in your machine and select any file (by clicking on it once). I selected a single file called 'how-to send an email.docx' 2. Now right click the mouse to have the context menu appear 3. In the context menu you should be able to see some commands like the capture below 4. Since we want to zip up the file you need to select one of the bottom two options a. 'Add to archive' will actually open up a dialog of the 7-zip application and will give you the opportunity to customise the archive. b. 'Add to how-to send an email.zip' is actually the quickest way possible to create an archive. The software uses the name of the file and selects a default compression scheme (.zip) so that you can, with two clicks, create a zip archive containing the original file. 5. Now you can use the 'how-to send an email.zip' file and send it as a 'smaller' email attachment. Now consider that you have just received (via email) the 'how-to send an email.zip' file and you need to get (the correct phrase is extract) the file it contains.