Table S10. A summary of the gene models in the morpheus clusters for contig-356, -445, -517 and -624 in the 1RS.1BL assembly. New ID Chr Start End Old ID contig Annotation Chr 1RS contigs TraesAK58CH1B01G017000 1B 64,621 76,104 evm.model.contig356.3 contig356 1RS_1 TraesAK58CH1B01G017010.1 1B 64,621 76,364 c30061b8-cf97-45b2-96a7-f67781811721 contig356 1RS_1 TraesAK58CH1B01G016900 1B 103,493 104,083 evm.model.contig356.4 contig356 1RS_1 TraesAK58CH1B01G017020 1B 103,493 104,083 276bc11c-9c6a-4b4f-af39-f9a6bcd96699 contig356 1RS_1 TraesAK58CH1B01G016800.1 1B 355,007 356,382 6aaf46d8-361e-4641-8f1f-49cd6d1875d9 contig356 1RS_1 TraesAK58CH1B01G016800 1B 355,084 356,247 evm.model.contig356.7 contig356 1RS_1 TraesAK58CH1B01G016700.1 1B 360,454 361,975 5b1252d8-f566-4e50-9cae-3fb4d7c4c889 contig356 1RS_1 TraesAK58CH1B01G016700 1B 360,550 361,879 evm.model.contig356.8 contig356 1RS_1 TraesAK58CH1B01G016600.1 1B 375,467 376,971 87944301-f49c-41b5-8df3-62412990be70 contig356 1RS_1 TraesAK58CH1B01G016600 1B 375,567 376,901 evm.model.contig356.9 contig356 1RS_1 TraesAK58CH1B01G016500.1 1B 460,193 463,893 2ab418f8-6dc2-4807-aec0-3ba15e56fa13 contig356 1RS_1 TraesAK58CH1B01G016500 1B 460,265 463,795 evm.model.contig356.14 contig356 1RS_1 TraesAK58CH1B01G016510 1B 509,178 512,693 e0d3494c-a4a5-4358-9533-dc8400dacb12 contig356 1RS_1 TraesAK58CH1B01G016510.1 1B 509,402 512,857 3cf7383d-cbb3-42d6-a37e-f3e22599a18f contig356 1RS_1 TraesAK58CH1B01G016530 1B 669,952 671,606 6874aea1-c8f6-4800-abcf-71229f4a78f4 contig356 1RS_1 TraesAK58CH1B01G016540 1B 674,870 678,872 326e24e0-d20e-4671-bf69-f00b62081a50 contig356 1RS_1 TraesAK58CH1B01G016400.1 1B 765,183 765,682 06f8543a-5c91-4b9c-a7c1-83b271433490 contig356 1RS_1 TraesAK58CH1B01G016400 1B 765,188 765,673 evm.model.contig356.33 contig356 1RS_1 TraesAK58CH1B01G016410 1B 778,740 783,212 08d3f0c5-8862-4b13-9ce8-e120dcb385f0 contig356 1RS_1 TraesAK58CH1B01G016420.1 1B 870,353 871,382 2af7f94b-bd41-4ca5-9cca-a5915a1f39ed contig356 1RS_1 TraesAK58CH1B01G016300 1B 870,433 871,302 evm.model.contig356.41 contig356 1RS_1 TraesAK58CH1B01G016310 1B 962,277 963,164 d3ff380c-9bbd-4fa9-933c-ada260bd6709 contig356 1RS_1 TraesAK58CH1B01G016200.1 1B 1,213,995 1,214,538 86ada844-edce-419f-9af9-c084b335e400 contig356 1RS_1 TraesAK58CH1B01G016200 1B 1,214,105 1,214,464 evm.model.contig356.58 contig356 1RS_1 TraesAK58CH1B01G016210 1B 1,225,644 1,226,309 8f98bd10-84ba-4ed9-8a6c-5cebab03b8b0 contig356 1RS_1 TraesAK58CH1B01G016220 1B 1,300,892 1,302,133 d36ec147-5f91-496f-bd9f-f109c8afeaf7 contig356 1RS_1 TraesAK58CH1B01G016210 1B 1,391,490 1,394,726 f1bdec6c-de2c-4b3d-b613-0b796678d5aa contig356 1RS_1 TraesAK58CH1B01G016100 1B 1,432,447 1,443,138 evm.model.contig356.72 contig356 1RS_1 TraesAK58CH1B01G016000 1B 1,452,835 1,454,826 evm.model.contig356.74 contig356 1RS_1 TraesAK58CH1B01G016010 1B 1,471,950 1,475,921 3a60149e-7319-4ab0-a953-81b11001efb6 contig356 1RS_1 TraesAK58CH1B01G015900 1B 1,472,444 1,475,641 evm.model.contig356.78 contig356 1RS_1 TraesAK58CH1B01G015800 1B 1,652,955 1,656,147 evm.model.contig356.90 contig356 1RS_1 TraesAK58CH1B01G015700 1B 2,027,091 2,028,063 evm.model.contig356.121 contig356 1RS_1 TraesAK58CH1B01G015600 1B 2,060,598 2,069,271 evm.model.contig356.122 contig356 1RS_1 TraesAK58CH1B01G015500 1B 2,287,768 2,288,957 evm.model.contig356.132 contig356 1RS_1 TraesAK58CH1B01G015400 1B 2,396,841 2,397,209 evm.model.contig356.139 contig356 1RS_1 TraesAK58CH1B01G015300 1B 2,933,893 2,937,208 evm.model.contig356.163 contig356 1RS_1 TraesAK58CH1B01G015410 1B 2,933,893 2,937,208 b2767ea1-7fab-4c53-8dd5-45e89f68c94f contig356 1RS_1 TraesAK58CH1B01G015310 1B 3,015,393 3,019,396 eb864480-c455-4b53-9f21-0d8dc753af99 contig356 1RS_1 TraesAK58CH1B01G015200 1B 3,015,474 3,015,939 evm.model.contig356.170 contig356 1RS_1 TraesAK58CH1B01G015100 1B 3,248,042 3,249,760 evm.model.contig356.176 contig356 1RS_1 TraesAK58CH1B01G015000 1B 3,399,549 3,400,391 evm.model.contig356.182 contig356 1RS_1 TraesAK58CH1B01G014900.1 1B 3,403,655 3,405,580 ca2ae9b8-1049-403c-87f8-d1080a099447 contig356 1RS_1 TraesAK58CH1B01G014900 1B 3,403,719 3,404,935 evm.model.contig356.184 contig356 1RS_1 TraesAK58CH1B01G014910 1B 3,480,913 3,497,866 9cede33b-9161-4d72-a137-3f8683de1ee2 contig356 1RS_1 TraesAK58CH1B01G014800 1B 3,646,502 3,646,982 evm.model.contig356.196 contig356 1RS_1 TraesAK58CH1B01G014800.1 1B 3,646,502 3,659,216 546a1cad-fb88-48cd-8f2a-39e6089f11ad contig356 1RS_1 TraesAK58CH1B01G014700 1B 3,677,410 3,679,395 evm.model.contig356.200 contig356 1RS_1 TraesAK58CH1B01G014720 1B 3,687,535 3,691,282 2b3cc59c-821e-4e70-9391-3302fe571b90 contig356 1RS_1 TraesAK58CH1B01G014600 1B 3,688,711 3,690,540 evm.model.contig356.205 contig356 1RS_1 TraesAK58CH1B01G014500 1B 3,791,785 3,795,522 evm.model.contig356.208 contig356 1RS_1 TraesAK58CH1B01G014400.1 1B 3,803,525 3,807,328 a66c109b-a603-467a-9e3b-317458f4a4b0 contig356 1RS_1 TraesAK58CH1B01G014400 1B 3,803,603 3,807,250 evm.model.contig356.209 contig356 1RS_1 TraesAK58CH1B01G014300 1B 3,808,539 3,811,360 evm.model.contig356.210 contig356 1RS_1 TraesAK58CH1B01G014200.1 1B 3,928,418 3,936,227 b68afb95-bf8d-47e3-9e3b-c9c5ea8fa7c2 contig356 1RS_1 TraesAK58CH1B01G014200 1B 3,930,412 3,936,227 evm.model.contig356.212 contig356 1RS_1 TraesAK58CH1B01G014100.1 1B 3,937,356 3,943,520 b9138c3b-7d58-4a8a-be0e-c801ab20bf29 contig356 1RS_1 TraesAK58CH1B01G014100 1B 3,937,636 3,943,520 evm.model.contig356.213 contig356 1RS_1 TraesAK58CH1B01G014000 1B 4,125,901 4,132,196 evm.model.contig356.216 contig356 1RS_1 TraesAK58CH1B01G013900.1 1B 4,218,516 4,221,252 0bd61f56-c08c-48b8-a6bf-70d0351fad36 contig356 1RS_1 TraesAK58CH1B01G013900 1B 4,219,429 4,221,252 evm.model.contig356.218 contig356 1RS_1 TraesAK58CH1B01G013910 1B 4,222,426 4,223,830 947350ac-90c1-4ff1-9c80-dfe7eb4bb069 contig356 1RS_1 TraesAK58CH1B01G013800.1 1B 4,316,316 4,319,880 cbc82f81-d03d-434e-8cba-82d27e273960 contig356 1RS_1 TraesAK58CH1B01G013800 1B 4,316,416 4,319,580 evm.model.contig356.222 contig356 1RS_1 TraesAK58CH1B01G013800.1 1B 4,323,261 4,326,453 abddda4b-ecf6-40ed-8b92-cd00cd3b223c contig356 1RS_1 TraesAK58CH1B01G013700 1B 4,323,381 4,326,453 evm.model.contig356.223 contig356 1RS_1 TraesAK58CH1B01G013600.1 1B 4,390,146 4,393,706 02cce1e4-b74c-4c91-87f9-7403993d5451 contig356 1RS_1 TraesAK58CH1B01G013600 1B 4,390,213 4,393,661 evm.model.contig356.226 contig356 1RS_1 TraesAK58CH1B01G013500.1 1B 4,395,978 4,399,128 7746c61b-ab85-463b-ae81-1e41643f49c8 contig356 1RS_1 TraesAK58CH1B01G013500 1B 4,396,056 4,399,128 evm.model.contig356.227 contig356 1RS_1 TraesAK58CH1B01G013400.1 1B 4,438,922 4,440,342 94bda8c8-38d2-4141-802d-c349550d7258contig356 1RS_1 TraesAK58CH1B01G013400 1B 4,438,955 4,440,342 evm.model.contig356.230 contig356 1RS_1 TraesAK58CH1B01G013300 1B 4,460,688 4,463,755 evm.model.contig356.232 contig356 1RS_1 TraesAK58CH1B01G013200.q 1B 4,489,531 4,493,158 49ed430d-1cd1-42aa-8d42-5540909be5b2 contig356 1RS_1 TraesAK58CH1B01G013200 1B 4,489,639 4,493,014 evm.model.contig356.233 contig356 1RS_1 TraesAK58CH1B01G013100.1 1B 4,516,386 4,520,135 05ef495b-44b6-4138-8266-7072f1fdbc36 contig356 1RS_1 TraesAK58CH1B01G013100 1B 4,516,762 4,518,788 evm.model.contig356.234 contig356 1RS_1 TraesAK58CH1B01G013000.1 1B 4,549,931 4,553,538 348a3b95-b859-495b-b910-298b84c1b3d0contig356 1RS_1 TraesAK58CH1B01G013000 1B 4,551,371 4,552,498 evm.model.contig356.235 contig356 1RS_1 TraesAK58CH1B01G013010 1B 4,553,435 4,554,208 f3781340-3308-4283-b030-6e5e9e0744b9 contig356 1RS_1 TraesAK58CH1B01G012900 1B 4,561,645 4,564,632 evm.model.contig356.236 contig356 1RS_1 TraesAK58CH1B01G012800 1B 4,580,163 4,584,719 evm.model.contig356.238 contig356 1RS_1 TraesAK58CH1B01G012820 1B 4,636,589 4,637,696 fd5bd5cb-c340-428c-98ed-59fb38e3f99b contig356 1RS_1 TraesAK58CH1B01G012830 1B 4,639,739 4,642,116 42e5ed7b-1337-4ef0-af1c-81edfafdaf0c contig356 1RS_1 TraesAK58CH1B01G012700 1B 4,662,642 4,665,708 evm.model.contig356.240 contig356 1RS_1 TraesAK58CH1B01G012600 1B 4,694,549 4,699,102 evm.model.contig356.241 contig356 1RS_1 TraesAK58CH1B01G012500.1 1B 4,764,936 4,765,502 48205154-d07b-44e5-8ce1-8b50032766b2contig356 1RS_1 TraesAK58CH1B01G012500 1B 4,764,981 4,765,473 evm.model.contig356.256 contig356 1RS_1 TraesAK58CH1B01G012505 1B 4,970,049 4,971,280 103cf0e0-10cd-48d3-8d1f-7587321d4853 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012510 1B 5,002,854 5,003,811 49f82b40-c77f-4215-99a3-86980ec6ac86 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012515 1B 5,007,833 5,008,674 c7fd2a53-dbb8-43b9-a523-f370eececf08 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012520 1B 5,025,074 5,025,987 e90caced-12be-41a2-8c3c-fd8fc2a2daf1 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012525 1B 5,037,671 5,038,578 53ce9a6f-0d02-4231-b5fd-60b86ad0bf3a contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012530 1B 5,042,968 5,043,990 38c5f59a-cbd8-4568-99b2-43c0ebd0c336 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012535 1B 5,048,294 5,049,176 0683281e-196b-4faf-95dd-8e9fd040ae9c contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012540 1B 5,054,353 5,055,427 200d7fe0-a761-4039-9c1f-78dd7668bf31 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012545 1B 5,059,572 5,060,639 c3ea9c3f-b1eb-4a04-8a55-990ef3fe3ce3 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012550 1B 5,064,822 5,065,899 21c0434a-7888-48b9-8cc4-7a944a37fc81 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012555 1B 5,093,484 5,094,196 7ef2f56a-c43d-4c39-8689-b0245e76a61e contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012560 1B 5,098,548 5,099,390 44dbb1fe-3229-4dd6-ad7c-e8af76f1f049 contig356 Gamma secalin1RS_1 TraesAK58CH1B01G012565