Transcript Length Frequency 00 50 0 100 9 200 20 300 33 400 89 500 171 600 231 700 299 800 341 900 465 1000 1,576 1500 2,526 2000 2,786 2500 2,527 3000 2,245 3500 1,741 4000 1,269 4500 1,023 5000 684 >5000 1,408 RefSeq Status Count INFERRED 6 PREDICTED 2480 PROVISIONAL 13796 REVIEWED 183 VALIDATED 2978 19443 Count of Strain Strain Total C57BL/6J 4235 129 71 C57BL/6 4841 102/El 1 Other C57 175 129/J 18 129 substrains 426 129/Ola 21 other 3789 129/Sv 138 unknown 5977 129/SvcJ7 6 19443 129/SvEv 14 129/SvEvTac 1 129/SvEvTacfBr 2 129/SvHe 1 129/SvJ 141 129/SvJ1 1 129/SvPas 1 129S3/SvImJ 1 129S6 1 129S6/SvEvTac 8 129Sv/ImJ 1 3h1 1 A/J 9 A/Sn 2 AKR 8 AKR/J 5 AKXL 1 AQR 1 B10.A 7 B10.BR 1 B10.D1/nSn 1 B10.D2/oSn 3 B10.M 1 B10.MOLunknownSGR 1 B10.RIII 1 B10.WR 2 B6.Kbunknown/unknownDbunknown/unknown 2 B6.S 2 B6/D2 1 B6C3/Fe 1 B6C3F1 2 B6CBAF2 1 B6D2 1 B6D2/J 1 B6D2F1 7 B6D2F1/J 6 B6SJLF1 1 BABunknown14 2 BALB.A2G 1 BALB/c 726 BALB/cAnPtD 1 BALB/cByJ 2 BALB/cCrSlc 1 BALB/cJ 6 BALB/cRl 1 BALB/cRos 1 BC8 1 BDF1 5 BFM/2Msf 1 BJR 1 BXHunknown2 1 C.B17 2 C.B17unknownscid 2 C129 1 C3H 35 C3H/An 11 c3h/e1 1 C3H/He 30 C3H/HeJ 10 C3H/HeN 6 C3H/HeNSIc 1 C3H/J 3 C3HeB/FeJ 2 C3HF 2 C57 8 C57BL 110 C57BL/10 10 C57BL/10J 8 C57BL/10SnJ 1 C57BL/6 4841 C57BL/6CrSlc 1 C57BL/6J 4235 C57BL/6N 15 C57BL/6NCrl 11 C57BL/6Nimr 1 c57bl/6x129/sv 1 C57BL/J 2 C57BL/Ka 1 C57BL/Rij 1 C57BL/WldS 2 C57BL6/Cr 1 C57BLKS 2 CBA 5 CBA/Ca 3 CBA/CaJ 1 CBA/J 4 CBA/N 1 CDunknown1 126 CDunknown1/Hsd 2 CFunknown1 4 CZECHII 349 D0.11.10 1 DAT 1 DBA 4 DBA/2 18 DBA/2Ibg 1 DBA/2J 15 DBA/LiHa 1 DDY 19 DW/J 1 EL/Suz 1 FVB 21 FVB/N 1490 FVB/Nunknown3 120 H129 1 house 1 ICR 153 ICR/Hsd 3 ICR/Jcl 5 ILS 2 ISS 2 JclunknownICR 1 KK/Ta 1 KM 7 Kunming 3 LAF1 4 Leaden 6 MF1 2 MORO 1 MRL/Mpunknownlpr 1 NFS 7 NIH 39 NMRI 72 NOD 215 NOD/Alt 1 NOD/Lt 1 NOR 1 NZB 1 NZW 1 PWK/Pas 2 RIII 2 SJL 1 SJL/J 1 SL 1 SSIN 1 Swiss 129 SWR/J 1 SWXJ 1 TKDU 1 unknown 5977 W1 WCB6F1 1 wild 1 YBR 1 Grand Total 19443 21.78% 24.90% 0.90% 2.19% 19.49% 30.74% Known Accession.versi Multiplici Transcript on Strain Length Status Symbol ty Test C57BL/6J MGSCv3 Celera NM_178083.2 C57BL/6J 1,760 PROVISIONAL Irf6 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_008283.1 unknown 234 PROVISIONAL Hpvc2 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_009550.1 C57BL/6Nimr 2,615 PROVISIONAL Zfp287 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NM_207679.2 unknown 6,303 VALIDATED Tro 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_011248.1 unknown 5,259 PROVISIONAL Robo3 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_175404.2 C57BL/6J 1,737 PREDICTED 3010003L21Rik 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NM_013624.1 BALB/c 10,052 PROVISIONAL Otog 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_010711.1 unknown 1,408 PROVISIONAL Lhx3 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_025320.1 C57BL/6J 1,440 PREDICTED 0610012G03Rik 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NM_030089.1 C57BL/6J 691 PREDICTED 4930471G03Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001033295.1 NOD 1,073 PROVISIONAL Cerk1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_178090.2 BALB/c 1,732 PROVISIONAL Drbp1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001033817.1 C57BL/6 2,230 PREDICTED F730021E23Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_053234.1 129/SvJ 837 PROVISIONAL V1rc4 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_181327.2 C57BL/6 2,982 PROVISIONAL Myh9 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_013894.1 unknown 1,098 PROVISIONAL Rnf17 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002882.1 unknown 1,880 PROVISIONAL LOC225307 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_183176.1 C57BL/6J 4,279 PREDICTED A930017M01Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_175468.2 C57BL/6 1,180 PROVISIONAL Rspo4 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002701.1 unknown 1,008 PROVISIONAL LOC544828 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_178387.2 C57BL/6 1,626 PROVISIONAL Spata18 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_177146.2 C57BL/6J 4,394 PREDICTED 9330175E14Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_010081.1 BALB/c 7,931 PROVISIONAL Dst 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_172847.1 C57BL/6J 2,677 PREDICTED C230030N03Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_175267.2 C57BL/6 2,893 PROVISIONAL Six3os1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002847.1 C57BL/6 1,756 PROVISIONAL Malat1 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_133970.1 C57BL/6J 1,005 PREDICTED D8Ertd354e 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_138628.1 C57BL/6J 4,394 PROVISIONAL Txlnb 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_053079.1 129/SvJ 3,128 PROVISIONAL Slc15a1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002863.1 FVB/N 5,045 PROVISIONAL Emx2os - NONE CDS_DIFF CDS_DIFF NO_ALIGN NM_173386.1 C57BL/6J 3,235 PREDICTED E330016A19Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_010867.1 unknown 5,645 PROVISIONAL Myom1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_015783.1 BALB/c 728 PROVISIONAL Isg15 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_178139.1 C57BL/6J 3,144 PROVISIONAL Otop1 1 PASS CDS_DIFF CDS_DIFF PASS NM_008566.1 unknown 2,649 VALIDATED Mcm5 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_011601.1 unknown 954 PROVISIONAL Tlm 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_201407.1 C57BL/6J 4,308 PROVISIONAL Dennd4b 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002857.1 C57BL/6 1,922 PROVISIONAL Psg-ps1 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_027819.1 C57BL/6J 1,985 PROVISIONAL Ggt6 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001033795.1 C57BL/6 3,322 PROVISIONAL Zcchc16 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_008500.1 unknown 1,734 PROVISIONAL Lhx6 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_028469.1 C57BL/6J 1,440 PREDICTED 3110082I17Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001034902.1 C57BL/6 4,642 PREDICTED LOC545861 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_138942.2 unknown 2,274 VALIDATED Dbh 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_020557.3 C57BL/6J 3,022 VALIDATED Tyki 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_146718.1 unknown 900 PROVISIONAL Olfr430 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_008422.1 AKR/J 2,040 PROVISIONAL Kcnc3 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_008651.1 BALB/c 2,265 PROVISIONAL Mybl1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_013798.1 unknown 1,952 PROVISIONAL Actg - PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_183311.1 C57BL/6J 2,301 PREDICTED Tmem145 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_011439.1 unknown 3,181 PROVISIONAL Sox13 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002870.1 unknown 7,938 PROVISIONAL Dnm3os - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_023873.2 unknown 2,626 PROVISIONAL Cep70 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001037911.1 unknown 1,592 PREDICTED LOC622129 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_207130.1 BALB/c 5,084 PROVISIONAL Abca16 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_178074.2 C57BL/6J 3,303 PROVISIONAL Xpnpep2 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002864.1 129 4,745 PROVISIONAL Peg13 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_019671.1 unknown 2,580 VALIDATED Net1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_012023.1 unknown 1,565 PROVISIONAL Ppp2r5c 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002858.1 unknown 1,180 PROVISIONAL LOC241041 - NONE CDS_DIFF CDS_DIFF NO_ALIGN NM_007839.1 unknown 2,877 VALIDATED Dhx15 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001033495.1 C57BL/6 2,336 PREDICTED 9330154J02Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_130796.1 C57BL/6 4,441 PROVISIONAL Snag1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_175746.2 C57BL/6J 1,696 PROVISIONAL Edaradd 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_134448.1 BALB/c 22,218 VALIDATED Dst 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_001033802.1 unknown 1,515 PREDICTED G930045G22Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_030260.1 NMRI 2,867 PROVISIONAL Zxdc 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_145474.1 FVB/N 1,635 PROVISIONAL BC018285 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_009374.1 BALB/c 2,297 PROVISIONAL Tgm3 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_030254.2 C57BL/6J 2,702 PROVISIONAL Tusc3 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002871.1 unknown 1,435 PROVISIONAL Vax2os2 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_010875.2 C57BL/6 2,583 PROVISIONAL Ncam1 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_172738.1 C57BL/6J 2,003 PREDICTED 5730403M16Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_027460.1 C57BL/6J 1,349 VALIDATED Slc25a33 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_026431.1 C57BL/6J 1,059 PREDICTED 1810043G02Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_002865.1 unknown 109 PROVISIONAL Rnu11 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_181399.2 unknown 4,371 PROVISIONAL Usp6nl 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_172895.1 C57BL/6J 2,743 PREDICTED 4930401F20Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_029277.1 unknown 4,020 VALIDATED Arhgap12 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NR_001463.2 129/Sv 17,919 REVIEWED Xist - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_001033875.1 unknown 970 PROVISIONAL Ctrc 1 PASS CDS_DIFF CDS_DIFF PASS NM_133805.2 129/SvJ 2,058 VALIDATED Cops8 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_153413.1 unknown 6,449 PROVISIONAL Dock3 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NM_021365.1 unknown 1,290 PROVISIONAL Xlr4b 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NR_002859.1 BALB/c 708 PROVISIONAL Olfr75-ps1 - NONE CDS_DIFF CDS_DIFF CDS_DIFF NM_019973.1 129/Sv 6,549 PROVISIONAL Son 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_015779.1 BALB/c 798 VALIDATED Ela2 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_011760.1 unknown 2,267 PROVISIONAL Zfp54 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_175446.2 C57BL/6 2,229 VALIDATED B930008K04Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_009531.1 unknown 3,031 PROVISIONAL Xpc 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_010731.2 FVB/N 4,901 VALIDATED Zbtb7a 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_199013.1 NOD 1,834 PROVISIONAL Irgc1 1 PASS CDS_DIFF CDS_DIFF NO_ALIGN NM_029440.2 C57BL/6J 2,484 PREDICTED 4930434E21Rik 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_008731.1 unknown 3,379 PROVISIONAL Npy2r 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF NM_021600.1 C3H 1,961 PROVISIONAL Chrnd 1 PASS CDS_DIFF CDS_DIFF CDS_DIFF