Clement Jonquet’s CV – July 2021 CLE M E NT JONQUET PHD IN INFORMATICS ASSOCIATE PROFESSOR, UNIVERSITY OF MONTPELLIER & ASSOCIATE RESEARCH SCIENTIST, INRAE ORCID: 0000-0002-2404-1582 CONTACT & PROFESSIONAL SITUATION Born May 26, 1980, Nîmes (Gard), FranCe, married, 2 Children, FrenCh nationality. INRAE – MISTEA University of Montpellier – LIRMM 2 place Pierre Viala, 34060 Montpellier Cedex 161 rue Ada, 34095 Montpellier Cedex 5 – 2 France TEL: (+33/0) TEL: (+33/0) 467 41 97 43 § Skype: clementpro – Email: [email protected] – § Twitter: @jonquet_lirmmWeb : www.lirmm.fr/~jonquet – § PubliC profiles: Google SCholar, MiCrosoft, ResearchGate, DBLP, HAL, PubMed, CiteSeer. CV STRENGTHS § Multidisciplinary research activities: ontologies, semantiC Web, ontology repositories, biomedical informatics, semantic annotation, text mining, service-oriented computing, Web sCienCe, agents. § Experience in applied research (biomedicine, agronomy), software engineering & transfer skills. § (Co)author of 125 publications or communications cumulating more than 3180 citations, including 26 international journals in multiple domains, 6 as first author, 4 as last, and 63 conf/workshop artiCles. § Collaborative work experience, project funded research (EU, ANR, NIH), management skills (project leading, outsourcing, supervision). § PrinCipal investigator of 2 ANR projects (one Young researcher program), Co-PI of 2 ANR projects, reCipient of H2020 Marie Sklodowska-Curie grant. § 9 years of various academic teaching (~1400h ~TD) in InformatiCs/CS to different grades. § (Co)supervision of 15+ MSC. Students & 4 PhD candidates, 6 postdocs, 4 engineers. § Mobility: 3-year postdoc and later 3-year visiting scholar at Stanford University. CONTENTS CONTACT & PROFESSIONAL SITUATION ............................................................................................................................................. 1 CV STRENGTHS ....................................................................................................................................................................................... 1 CONTENTS ................................................................................................................................................................................................ 1 WORK EXPERIENCE ................................................................................................................................................................................ 3 EDUCATION ............................................................................................................................................................................................. 3 RESEARCH ACTIVITY .............................................................................................................................................................................. 3 SCIENTIFIC INFLUENCE AND DISSEMINATION ................................................................................................................................... 6 COLLABORATIONS & WORKING GROUPS ........................................................................................................................................... 7 PROFESIONNAL RESPONSABILITIES ..................................................................................................................................................... 9 PUBLICATION SYNTHESIS ..................................................................................................................................................................... 12 DETAILED SEMINARS & INVITED PRESENTATIONS ........................................................................................................................ 13 SUMMARY OF TEACHING ACTIVITIES ................................................................................................................................................ 15 TECHNICAL SKILLS ................................................................................................................................................................................ 15 PERSONNAL TOPICS .............................................................................................................................................................................. 15 LANGUAGES ........................................................................................................................................................................................... 15 REFEREES ............................................................................................................................................................................................... 16 LIST OF PUBLICATIONS ........................................................................................................................................ 17 1 1 Clement Jonquet’s CV – July 2021 JOURNAL ................................................................................................................................................................................................. 17 INTERNATIONAL CONFERENCE ......................................................................................................................................................... 18 SERIES/CHAPTER .................................................................................................................................................................................. 20 WORKSHOP ............................................................................................................................................................................................. 20 NATIONAL (FRENCH) CONFERENCE ................................................................................................................................................. 21 EDITOR ................................................................................................................................................................................................... 23 DISSERTATION ....................................................................................................................................................................................... 23 POSTER & DEMONSTRATION .............................................................................................................................................................. 23 REPORT ................................................................................................................................................................................................... 25 DETAILED RESEARCH ACTIVITY ...................................................................................................................... 27 FOCUS ON HDR (HABILITATION) SYNTHESIS (2019) ...................................................................................................................... 27 RESEARCH PROJECTS (2003-2023) ...................................................................................................................................................... 27 POSTDOCTORAL RESEARCH ACTIVITY (2007-2010) ........................................................................................................................ 30 PHD THESIS RESEARCH ACTIVITY (2003-2006) ............................................................................................................................... 31 MSC RESEARCH ACTIVITY (2003 AND BEFORE) ............................................................................................................................... 33 (FRENCH) DETAILS DES ACTIVITES D’ENSEIGNEMENT .......................................................................... 34 EXPERIENCE .......................................................................................................................................................................................... 34 RESPONSABILITES .................................................................................................................................................................................. 34 FORMATION A LA PEDAGOGIES SUIVIES ............................................................................................................................................ 34 RECAPITULATIF ...................................................................................................................................................................................... 35 ENSEIGNEMENTS EFFECTUES ............................................................................................................................................................. 36 INTERVENTIONS DIVERSES & ENCADREMENTS .............................................................................................................................. 37 2 2 Clement Jonquet’s CV – July 2021 WORK EXPERIENCE § Start. Sept. 2020: Associate Research Scientist (secondment), INRAE, France. MathematiCs, InformatiCs and STatistiCs for Environment and Agronomy (MISTEA). § Since May 2019: Associate Professor (HDR), University of Montpellier, FranCe. Researcher in the Laboratory of Informatics, Robotics, and Microelectronics of Montpellier (LIRMM). § 2015-2018: Visiting scholar, Stanford University, USA. Center for Biomedical InformatiCs Research (BMIR). Working with Pr. M. A. Musen & the NCBO. § 2010-2019: Assistant Professor, University of Montpellier, FranCe.