(Title of the Thesis)*

(Title of the Thesis)*

NEU1 SIALIDASE AND MATRIX METALLOPROTEINASE-9 CROSS-TALK IS ESSENTIAL FOR TOLL-LIKE RECEPTOR ACTIVATION AND CELLULAR SIGNALING by Samar Abdulkhalek A thesis submitted to the Graduate Program in Microbiology and Immunology in the Department of Biomedical and Molecular Sciences In conformity with the requirements for the degree of Doctor of Philosophy Queen’s University Kingston, Ontario, Canada (April, 2013) Copyright ©Samar Abdulkhalek, 2013 Abstract The molecular mechanism(s) by which Toll-like receptors become activated are not well understood. For the majority of TLR receptors, dimerization is a prerequisite to facilitate MyD88-TLR complex formation and subsequent cellular signaling to activate NF-κB. However, the parameters controlling interactions between the receptors and their ligands still remain poorly defined. Previous reports have identified that neuraminidase-1 (NEU1) is an important intermediate in the initial process of TLR ligand induced receptor activation and subsequent cell function. What we do not yet understand is how NEU1 is activated following TLR ligand binding. In this thesis, the findings disclose a receptor signaling paradigm involving a process of receptor ligand-induced GPCR-signaling via neuromedin-B (NMBR) Gα-proteins, matrix metalloproteinase-9 (MMP-9) activation, and the induction of Neu1 activation. Central to this process is that NEU1–MMP-9- NMBR complex is associated with TLR-4 receptors on the cell surface of naive primary macrophages and TLR-expressing cell lines. Ligand binding to the receptor initiate GPCR-signaling via GPCR Gα subunit proteins and MMP-9 activation to induce NEU1. Activated NEU1 targets and hydrolyzes sialyl α-2-3-linked to β-galactosyl residues at the ectodomain of TLRs, enabling the removal of steric hindrance to receptor association, activation of receptors and cellular signaling. Furthermore, a novel glycosylation model is uncovered for the activation of nucleic acid sensing intracellular TLR-7 and TLR-9 receptors. It discloses an identical signaling paradigm as described for the cell-surface TLRs. NEU1 and MMP9 cross-talk in alliance with neuromedin-B receptors tethered to TLR-7 and -9 receptors at the ectodomain is essential for ligand activation of the TLRs ii and pro-inflammatory responses. However, the mechanism(s) behind this GPCR and TLR cross-talk has not been fully defined. Here, GPCR agonists mediate GPCR- signaling via membrane Gα subunit proteins to induce NEU1 and MMP-9 cross-talk at the TLR ectodomain on the cell surface. This molecular organizational GPCR signaling platform is proposed to be an initial processing stage for GPCR agonist-induced transactivation of TLRs and subsequent cellular signaling. Collectively, these novel findings radically redefine the current dogma(s) governing the mechanism(s) of the interaction of TLRs and their ligands, which may provide important pioneering approaches to disease intervention strategies. iii Co-Authorship Chapter 2. Neu1 Sialidase and Matrix Metalloproteinase-9 Cross-talk Is Essential for Toll-like Receptor Activation and Cellular Signaling Schammim Ray Amith, Susan L. Franchuk, Preethi Jayanth, Merry Guo, Trisha Finlay, Alanna Gilmour, Christina Guzzo, Katrina Gee, Rudi Beyaert§¶, and Myron R. Szewczuk All co-authors gave permission to publish the data in the Journal of Biological Chemistry 2011;286(42): 36532–36549. ‡Department of Biomedical and Molecular Sciences, Queen’s University, Kingston, Ontario K7L 3N6, Canada §Department for Molecular Biology, Ghent University, Technologiepark 927, B-9052 wijnaarde, Belgium ¶Unit for Molecular Signal Transduction in Inflammation, Department for Molecular Biomedical Research, VIB, 9052 Gent, Belgium Chapter 3. G-protein coupled receptor agonists mediate Neu1 sialidase and matrix metalloproteinase-9 cross-talk to induce transactivation of TOLL-like receptors and cellular signaling Merry Guo, Schammim Ray Amith, Preethi Jayanth and Myron R. Szewczuk All co-authors gave permission to publish the data in Cellular Signalling 24 (2012) 2035– 2042. Chapter 4. NEU1 Sialidase, Matrix Metalloproteinase-9 and Neuromedin B Receptor Cross-talk Controls Endosomal TOLL-like Receptor-7 and -9 Responses Myron R. Szewczuk Co-author gave permission to publish the data in Cellular Signaling under peer-review. iv Acknowledgements First, I thank God the most gracious and most merciful for blessing me with guidance, strength and patience to complete this work. I would like to express my sincere thanks to my supervisor Dr. Szewczuk for his support, and mentorship through these years. His humor made the lab a friendly environment to spend the long hours in. His encouragement made this work possible. I would like to extend my gratitude to my committee members: Dr. Gee for her thoughtful comments on my research and valuable suggestions; Dr. Basta for broadening my knowledge on various aspects of science and history; and Dr. Tayade for his support and guidance throughout my PhD journey. I am grateful to all members of the previous microbiology and immunology department and the present Department of Biomedical and Molecular Sciences, particularly Dr. Finnen, Dr. Geletu, Jenny, Jerry, Jackie and Diane for their assistance and cheerful chats. I am thankful to the past and present members of the Szewczuk lab, and to my colleagues in the graduate program for their good companionship and for a lot of fun. I particularly acknowledge Farah, Alanna, Ila, Christina, Masany and Yan. I am in debt to all those who made my stay in Kingston a memorable one, especially Dr. Fatma and Rola, you have been wonderful neighbors and amazing friends. I will always be grateful to my previous mentors in the faculty of medicine and health sciences in UAE university specially Dr. Lukic and Dr. Ramadi. Their good mentorship and sincere advices encouraged me to continue in the field of immunology. Their belief in my capabilities was vital for directing me to pursue my graduate studies. v In terms of funding, I am thankful to the Ontario Graduate Scholarship for supporting me and to the Canadian Institute of Health Research (CIHR) for granting me the Frederick Banting and Charles Best Canada doctoral award. To my dearest family, your valuable support is beyond measure. To my dearest mother, sisters and brothers, I feel so lucky for having you in my life. You always had great faith that I could be successful in whatever I do and therefore I dedicate this thesis to you. vi Table of Contents Abstract ............................................................................................................................................ ii Co-Authorship ................................................................................................................................ iv Acknowledgements .......................................................................................................................... v List of Figures ................................................................................................................................. xi List of abbreviations ..................................................................................................................... xiii Chapter 1 Introduction and Literature Review ............................................................................... 1 1.1 Overview of the immune system ........................................................................................... 1 1.2 Toll-like Receptors................................................................................................................. 2 1.2.1 Molecular basis of TLR structure and ligand recognition .............................................. 4 1.2.2 TLR Signaling ................................................................................................................. 7 1.2.3 TLR Glycosylation .......................................................................................................... 9 1.3 Mammalian Sialidases ......................................................................................................... 10 1.3.1 NEU1 sialidase .............................................................................................................. 12 1.3.2 The role of NEU1 in modulating immune responses and inflammation ....................... 13 1.4 Matrix metalloproteinases .................................................................................................... 14 1.4.1 Role of MMP-9 in inflammation .................................................................................. 16 1.5 G protein-coupled receptors (GPCRs) ................................................................................. 17 1.5.1 GPCR crosstalk with TLRs ........................................................................................... 20 1.6 Rationale and Hypothesis .................................................................................................... 22 1.6.1 Overall hypothesis ........................................................................................................ 24 1.6.2 Aims of this study ......................................................................................................... 24 1.7 References: ........................................................................................................................... 25 Chapter 2 Neu1 Sialidase and Matrix Metalloproteinase-9 Cross-talk Is Essential for Toll-like Receptor Activation and Cellular Signaling .................................................................................

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