Jenna K. Caines, Sherri L. Christian, Mark D. Berry Department of Biochemistry, Memorial University of Newfoundland, St. John'

Jenna K. Caines, Sherri L. Christian, Mark D. Berry Department of Biochemistry, Memorial University of Newfoundland, St. John'

Trace Amine-Associated Receptors in Monocytes: A Constant Low-Level Expression Jenna K. Caines, Sherri L. Christian, Mark D. Berry Department of Biochemistry, Memorial University of Newfoundland, St. John’s NL Trace amine-associated receptors (TAARs) Is TAAR1 differentially expressed in response to Pro- and Are any TAARs differentially expressed between § G protein-coupled receptors anti-inflammatory stimuli? monocyte and macrophage lineages? § Established throughout the body in vertebrates Table 1: Datasets with n ≥ 3 examining human and mice macrophages Table 2: Datasets with n ≥ 3 containing several monocyte and § Humans have 6 functional isoforms: TAAR1, TAAR2, TAAR5, TAAR6, TAAR8, and TAAR9 treated with pro- and anti-inflammatory stimuli macrophage lineages from mice TAARs and the immune system Dataset Treatment Time TAAR1 p-value Dataset Cell type Number of lineages Treatment § Found in leukocyte populations1 GSE53986 Untreated (control) 0h examined INFγ 24h 0.8 GSE15907 Lung Macrophage 2 NA 1 § TAAR1 suspected of regulating immune response GSE60290 Untreated (control) 0h Peritoneal Macrophage 6 NA § Potential target for pharmacological treatment of immune disorders2 INFγ 18h 0.3 Spleen Macrophage NA GSE43075 Untreated (control) 0h Blood Monocyte 2 NA Hypothesis LPS 4h 0.45 Mesenteric LN monocyte 1 NA GSE121646 Untreated (control) 0h Oral Salmonella § TAAR1 will show differential expression upon activation and LPS 8h 0.7 Small intestine macrophage 2 Typhimurium(72 h) GSE19315 Untreated (control) 0h between leukocyte populations Intestine Macrophage 1 NA LPS 6h 0.85 Methods: microarray analysis Bone marrow Macrophage 1 NA Brain Macrophage (microglia) 1 NA § Collect published microarray data from NCBI GEO and Immgen § Neither LPS or INFγ has significant effect on TAAR1 Bone marrow Monocyte 2 NA Process to evaluate gene expression by microarray expression GSE37448 Lung Macrophage 2 NA Normal cell Treated cell Blood Monocyte 1 NA § TAAR1 expression is not activation-dependent Lymph node (skin draining) Cell samples Not significant: Monocyte 1 NA Not present in cells Fat (viseral) Macrophage 1 NA Peritoneal Macrophage 2 Gata6 knockout Present in both cells Cell culture Liver Macrophage 2 NA Significant: Relative TAAR1 expression in various monocyte and In normal cells only macrophage lineages generated by Immgen mRNA RNA isolation mRNA MF.BM In treated cells only MF.RP.Sp Table 3: P-values for differential expression of TAARs in monocyte Reverse transcription MF.Lu cDNA cDNA MF.103-11b+.Lu and macrophage lineages contrasted with lung macrophages and labeling MF.II-480hi.PC Green Fluorescent Red Fluorescent MF.II+480lo.PC probes MF.Microglia.CNS Gene TAAR1 TAAR2 TAAR5 TAAR8 probes MF.Thio5.II+480int.PC Dataset MF.Thio5.II-480int.PC MF.Thio5.II-480hi.PC GSE15907 0.3 0.05 0.25 0.3 MF.Thio5.II+480lo.PC Hybridize MF.103-11b+.SI cDNA probes to MF.11cloSer.SI GSE37448 0.85 0.8 0.3 0.25 Scan Mo.6C+II-.BM oligo sequences Mo.6C-II-.BM Mo.6C+II-.BI on microarray Mo.6C+II+.BI Mo.6C-II-.BI Mo.6C-II+.BI § Only TAAR2 shows significant difference between lineages Mo.6C-Iiint.BI Mo.6C+II-.LN § RMA normalize the data and extract a list of differentially GN.BM GN.BI GN.Arth.BM expressed genes using R studio GN.Arth.SynF GN.UrAc.PC Anexprs example of RMA normalizationexprs GN.Thio.PC Mo.6C+_II.BI.v2 14 Mo.6C+II-.BIv2 References: 14 MF.Lu.v2 12 MF.11c-11b+.Lu.v2 1 12 Gainetdinov et al. (2018). Trace Amines and Their Receptors. Pharmacological MF.480int.Lv.v2 10 MF.480hi.Lv.v2 10 8 MF.AT.v2 reviews, 70(3), 549–620. EO.AT.v2 8 6 GN.BI.v2 2 Eo.BL.v2 Christian, S. L., & Berry, M. D. (2018). Trace Amine-Associated Receptors as 4 6 2 4 Novel Therapeutic Targets for Immunomodulatory Disorders. Frontiers in MF.11C−11B+.LU_1.CEL MO.6+2+.SLN_1.CEL MF.11C−11B+.LU_1.CEL MO.6+2+.SLN_1.CEL § Examine for significant differential expression of TAARs § TAAR1 is present and shows a constant low-level expression pharmacology, 9, 680..

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