A Mutation Update for the FLNC Gene in Myopathies and Cardiomyopathies

A Mutation Update for the FLNC Gene in Myopathies and Cardiomyopathies

Received: 20 December 2019 | Revised: 12 February 2020 | Accepted: 25 February 2020 DOI: 10.1002/humu.24004 MUTATION UPDATE A mutation update for the FLNC gene in myopathies and cardiomyopathies Job A. J. Verdonschot1,2 | Els K. Vanhoutte1 | Godelieve R. F. Claes1 | Apollonia T. J. M. Helderman‐van den Enden1 | Janneke G. J. Hoeijmakers3 | Debby M. E. I. Hellebrekers1 | Amber de Haan1 | Imke Christiaans4,5 | Ronald H. Lekanne Deprez4 | Hanne M. Boen6 | Emeline M. van Craenenbroeck6 | Bart L. Loeys7 | Yvonne M. Hoedemaekers5,8 | Carlo Marcelis8 | Marlies Kempers8 | Esther Brusse9 | Jaap I. van Waning10,11 | Annette F. Baas12 | Dennis Dooijes12 | Folkert W. Asselbergs13 | Daniela Q. C. M. Barge‐Schaapveld14 | Pieter Koopman15 | Arthur van den Wijngaard1 | Stephane R. B. Heymans2,16,17 | Ingrid P. C. Krapels1 | Han G. Brunner1,8,18 1Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands 2Department of Cardiology, Cardiovascular Research Institute (CARIM), Maastricht University Medical Center, Maastricht, The Netherlands 3Department of Neurology, Maastricht University Medical Center, Maastricht, The Netherlands 4Department of Clinical Genetics, Amsterdam University Medical Center, Amsterdam, The Netherlands 5Department of Clinical Genetics, University Medical Centre Groningen, Groningen, The Netherlands 6Department of Cardiology, Antwerp University Hospital, University of Antwerp, Antwerp, Belgium 7Department of Medical Genetics, Antwerp University Hospital, University of Antwerp, Antwerp, Belgium 8Department of Clinical Genetics, Radboud University Medical Centre, Nijmegen, The Netherlands 9Department of Neurology, Erasmus MC University Medical Centre, Rotterdam, The Netherlands 10Department of Clinical Genetics, Erasmus Medical Center, Rotterdam, The Netherlands 11Department of Cardiology, Radboud University Medical Centre, Nijmegen, The Netherlands 12Department of Genetics, University Medical Center Utrecht, Utrecht, The Netherlands 13Department of Cardiology, University Medical Center Utrecht, Utrecht, The Netherlands 14Department of Clinical Genetics, Leiden University Medical Center, The Netherlands 15Department of Cardiology, Heart Center Hasselt, Belgium 16Department of Cardiovascular Sciences, Centre for Molecular and Vascular Biology, KU Leuven, Leuven, Belgium 17The Netherlands Heart Institute, Utrecht, The Netherlands 18Department of Genetics and Cell Biology, GROW Institute for Developmental Biology and Cancer, Maastricht University Medical Centre, Maastricht, The Netherlands Correspondence Han G. Brunner, Department of Clinical Abstract Genetics, Maastricht University Medical Center (MUMC+), PO Box 5800, 6202 AZ Filamin C (FLNC) variants are associated with cardiac and muscular phenotypes. Maastricht, The Netherlands. Originally, FLNC variants were described in myofibrillar myopathy (MFM) patients. Email: [email protected] Job A. J. Verdonschot and Els K. Vanhoutte contributed equally to this work. -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. © 2020 The Authors. Human Mutation published by Wiley Periodicals, Inc. Human Mutation. 2020;1–21. wileyonlinelibrary.com/journal/humu | 1 2 | VERDONSCHOT ET AL. Later, high‐throughput screening in cardiomyopathy cohorts determined a promi- nent role for FLNC in isolated hypertrophic and dilated cardiomyopathies (HCM and DCM). FLNC variants are now among the more prevalent causes of genetic DCM. FLNC‐associated DCM is associated with a malignant clinical course and a high risk of sudden cardiac death. The clinical spectrum of FLNC suggests different pathomechanisms related to variant types and their location in the gene. The appropriate functioning of FLNC is crucial for structural integrity and cell signaling of the sarcomere. The secondary protein structure of FLNC is critical to ensure this function. Truncating variants with subsequent haploinsufficiency are associated with DCM and cardiac arrhythmias. Interference with the dimerization and folding of the protein leads to aggregate formation detrimental for muscle function, as found in HCM and MFM. Variants associated with HCM are predominantly missense variants, which cluster in the ROD2 domain. This domain is important for binding to the sarcomere and to ensure appropriate cell signaling. We here review FLNC genotype–phenotype correlations based on available evidence. KEYWORDS cardiomyopathy, filamin, FLNC, genotype–phenotype correlation, myopathy 1 | BACKGROUND domain pairs. These organizational differences between the domains explain why certain ligands bind exclusively to ROD1 or ROD2. Similar to other filamins, Filamin C (FLNC) is a structural protein The FLNC gene maps to chromosome 7q32–35 and has two main which has an actin‐binding domain (ABD) composed of two calponin transcripts, NM_001127487.2 and NM_001458.4. It comprises ~29.5 homology (CH) domains, 24 immunoglobulin (Ig) domains divided into a kb of genomic DNA and is composed of 49 coding exons (Chakarova ROD1 and ROD2 subdomain, and a C‐terminal dimerization domain et al., 2000). The difference between the two transcripts is the (van der Flier & Sonnenberg, 2001). The dimerization of two identical presence or absence of exon 31 encoding the hinge region between filamin proteins is necessary for appropriate function and occurs Ig‐likechroIg‐like domains 15 and 16 (Xie, Xu, Davie, & Chung, 1998). via Ig‐like domain 24 (Himmel, Van Der Ven, Stocklein, & Furst, 2003). The longest transcript, NM_001458.4, encodes a protein with a In contrast to filamin A and B, filamin C expression is restricted to molecular mass of 291 kDa and 2.725 amino acids, whereas the striated muscles and localizes around the Z‐disc, the sarcolemma, shorter transcript NM_001127487.2 encodes a slightly shorter protein the myotendinous junction, and the intercalated discs (Thompson (287 kDa, 2.692 amino acids) that is assumed to be less flexible. et al., 2000). Its main role is maintaining the structural integrity of the The exact roles of these two isoforms are unknown, but the long sarcomere. This is through crosslinking actin filaments and the FLNC isoform is more abundantly expressed during cardiac stress anchoring of sarcolemmal proteins to the cytoskeleton. The main while almost absent in the normal situation (Kong et al., 2010). This interactors of FLNC are either part of the Z‐disc (myotilin, myozenin, could potentially alter the integrity and function of the key sarcomeric myopodin, and calsarcins), signaling molecules (Zhang, Liu, structures to cope with increased cell stress. The short isoform is Cheng, Deyoung, & Saltiel, 2007) or sarcolemma‐associated proteins mainly expressed in the normal situation and is 3.5 times higher (integrin β1, sarcoglycan delta; Anastasi et al., 2004;Furstetal.,2013; expressed in skeletal compared with cardiac muscle. Takada et al., 2001).Proteasessuchascalpaincanregulatetheinter- Variants in FLNC are traditionally associated with myofibrillar action between FLNC and the sarcoglycans by cleaving the corre- myopathy (MFM; MIM# 609524), but subsequently also with sponding binding domains of FLNC (Guyon et al., 2003). In addition, isolated cardiomyopathies (MIM# 617047). To date, most FLNC interacts with the Xin actin‐binding repeat‐containing proteins available basic research on FLNC has focused on myopathies. (XIRP)andaciculintofulfillafunctioninmusclemaintenance(Fujita Paradoxically, most genetic variants are described in cardiomyo- et al., 2012; Leber et al., 2016;Moltetal.,2014). This interaction is pathy patients, as this clinical entity is more prevalent and studies mediated via a unique insertion in Ig‐like domain 20, which is absent using high‐throughput sequencing of FLNC are more frequent in in the other filamin paralogs. The ROD1 domain (Ig 1–15) is more cardiomyopathy cohorts. This overview highlights known and stretched and lacks interdomain interactions in contrast to the ROD2 novel FLNC variants and focuses on specific pathomechanisms domain (Ig 16–23), which is more compact and globularly arranged by important for distinct cardiac or muscular phenotypes. VERDONSCHOT ET AL. | 3 2 | VARIANTS 2.1 | Cardiomyopathies All FLNC variants are described according to current Human Cardiomyopathies are a heterogeneous group of myocardial diseases Genome Variation Society mutation nomenclature guidelines based associated with mechanical or electrical dysfunction that exhibit in- on Genbank accession number NM_001458.4 (longest transcript). appropriate ventricular hypertrophy or dilatation (Elliott et al., 2008; Previously reported and novel variants are interpreted and Maron et al., 2006). In this review, we distinguish between: classified using American College of Medical Genetics and Genomics classification recommendations (Richards et al., 2015). 1. Dilated cardiomyopathy (DCM): Characterized by the presence of A total of 285 unique variants could be retrieved from the left ventricular dilatation and contractile dysfunction, in the international peer‐reviewed literature, the Human Gene Mutation absence of abnormal loading conditions and severe coronary Database and the Leiden Open Variation Database (LOVD; Figure

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