Suggested New Terms for Describing Chiral States and the State-Dependent Behavior of Chiral Systems

Suggested New Terms for Describing Chiral States and the State-Dependent Behavior of Chiral Systems

International Journal of Organic Chemistry, 2012, 2, 224-232 http://dx.doi.org/10.4236/ijoc.2012.23031 Published Online September 2012 (http://www.SciRP.org/journal/ijoc) Suggested New Terms for Describing Chiral States and the State-Dependent Behavior of Chiral Systems Karel D. Klika Department of Chemistry, University of Turku, Turku, Finland Email: [email protected] Received May 9, 2012; revised June 15, 2012; accepted June 29, 20123 ABSTRACT Deficiencies in the terminology used to describe chiral systems exist for behaviors under various processes and thus a more general, robust terminology is considered. For example, the descriptions for characterizing melting point, solubil- ity, and recrystallization behaviors were adopted well before it was realized that perturbation of the enantiomeric com- position (ec) due to self-disproportionation could be effected by processes other than recrystallization such as sublima- tion, chromatography over achiral substrates, and even distillation. Thus, an endeavor has been made to address the question of universally describing behaviors under processes that effect, or are dependent on, the ec. The main terms that have been defined with respect to behavior are homomate (analogous to a conglomerate), heteromate, bimate (analogous to a racemic compound), and unimate (analogous to a solid solution) and they apply to melting point, solu- bility, recrystallization, sublimation, distillation, and chromatographic processes. Additionally, suggestions for improv- ing the terminology for describing the states of chiral systems are also considered and the defined terms are: holemate (hol, ec = 100%), scalemate (scl, 50% < ec < 100%), and equimate (eqm, ec = 50%). Keywords: Stereochemistry; Terminology; Chirality; State-Dependent Behavior; Conglomerate; Racemate A clear consensus for describing chiral systems, both for better example of this than the term homochiral1 [4-6]. processes, behaviors, and for the general state of systems, Thus it is the intention of this report to help alleviate does not seem to be in effect despite the enormous some of the deficiencies that have developed in the ter- amount of study devoted to chiral systems and their as- minology in use with respect to chiral systems, especially sociated behaviors ever since the seminal experiments of since the systems that give rise to varying chiral behav- Pasteur into the relationships between the crystalline iors have risen in number and complexity over the course state and chemical composition and their relation to op- of time. tical rotation (OR) [1,2]—thus consequently the very One argument against new terminology, however, is embodiment of chirality and the subsequent inferences that it in itself creates additional confusion and can be for homochirality, not to mention of course, the very re- misleading, but this of course is not necessarily true. For port of the spontaneous resolution of a conglomerate example, the concept of inverse epimers [7] and the de- itself [3]. Invariably, whatever particular description is piction of the relative stereochemistry [8] have been found to be most convenient and quite useful for the al- adopted encounters objection from one quarter or another numycin Als [7,9,10] derived from bacterial sources [11]. and hence the obvious question, though rhetorical in na- To further illustrate the proposed [8] extension to the ture, is, what is the origin of the confusion and ambiguity Natta projection system2, the following monoterpene that exists? In part, confusion and ambiguity arise be- cause authors may be, for example, be referring to a sin- 1Perhaps somewhat enigmatically, the author does not feel compelled to push for the abandonment of the term homochirality. Homochiral is a gle molecule or type of molecule or, on the other hand, general adjective and its use should be restricted to the molecular do- an aggregation of molecules or a real sample analysis main as per its originally intended use rather then also being used to without taking due care to be precise in their meaning describe macroscopic domains given the problems outlined by a num- ber of authors [4-6]. Homochirality, on the other hand, though ostensi- and simply assuming that the context of the discussion is bly the noun form of homochiral, has become thoroughly entrenched as sufficient to effect a distinction. Another source of con- a specific concept, that of the predominance of D-sugars and L-amino fusion is the fact that as new frontiers were explored or acids in the biosphere. Since there does not seem to be any need for use of the noun in the general sense, its continued use is therefore unprob- developed, the terminology failed to keep pace and terms lematic. were simply borrowed out of convenience. There is no 2Giulio Natta, 1903-1979. Copyright © 2012 SciRes. IJOC K. D. KLIKA 225 systems can be considered. For the diepoxides of limo- nene (1a) [12] depicted in Figure 1 with three effective stereogenic centers3, the total number of possible stereo- isomers is eight. The epoxidation of (+)-(4R)-limonene can thus yield four stereoisomers, but the depiction of all four of these stereoisomers (1b) in the one figure using conventional wavy-bond notation for indeterminate Figure 2. Various depictions of the stereoisomeric 2α,9/ stereochemistry implies that in addition to 1S,2R and 10-dihydroxy-1,8-cineoles. 1R,2S configurations, 1R,2R and 1S,2S configurations are also possible. Chemical sense prevails for the experi- Overall, the terminology in use for processes, behav- enced reader, but for uninitiates and computer software, iors, and for the general state of systems is multiple, re- this may be less evident. Similarly for the cis and trans stricted, on occasion inadequate, and sometimes am- pair of stereoisomers depicted in 1c, but which can be biguous. Indeed, Gal [4,5], Eliel [6], Klika [8], Gawley portrayed unambiguously and errant-free by the depic- [14], Kagan [15], Brewster [16], Heathcock [17], and the tion in 1d. Thus, for the depiction of all four stereoisom- Cornforths [18], as well as many others, have recognized eric diepoxides of (+)-(4R)-limonene, structure 1e nicely the need and urged for change. Two examples of am- fulfills the demands for clarity and consistency with biguous terms, homochiral and racemate, illustrate the chemical restraints. point. Firstly, the original meaning of homochiral was Similarly, for 2α,9-dihydroxy-1,8-cineole [13], to de- defined by Lord Kelvin to refer to the stereochemical pict both enantiomers of this compound unambiguously, relationship between molecules (or between substituents, structure 2a depicted in Figure 2 fulfills the demands in moieties, etc., within a molecule) that have the same contrast to 2b which, due to the undefined stereo bonds sense of chirality, yet its meaning was, due to lack of a at C1-C2 and C1-C6, implies the presence of one or other suitable alternative, expanded to incorporate the enanti- or both of the C-8 inverse epimers [7] {viz. (1S,2S,4R,8R) omeric composition4 (ec) of a sample [4,5], i.e. it -2α,9-dihydroxy-1,8-cineole and (1R,2R,4S,8R)-2α,10- morphed from molecular designate into a macroscopic dihydroxy-1,8-cineole}, whilst 2c with undefined stereo description leading to ambiguity and oft times confusion. bonds at C8-C9 and C8-C10, implies the presence of one or Secondly, the term “racemate” can elicit confusion [19] other or both of the C-8 epimers {viz. (1S,2S,4R,8R) since its use may be intended to refer to a sample mixture -2α,9-dihydroxy-1,8-cineole and (1S,2S,4R,8S)-2α,10- comprising of a 1:1 composition of the enantiomers, or dihydroxy-1,8-cineole}, and finally, 2d merely implies the user may be referring to a sample which will crystal- the presence of one or other or both of (1S,2S,4R,8R)-2α, lize out as a mixture of the enantiomers with a set ratio, 9-dihydroxy-1,8-cineole and (1S,2R,4R,8R)-2β,9-dihy- e.g. 1:1, of the enantiomers in the unit cell. The former droxy-1,8-cineole. Clearly there are advantages to using application of the term is an analytical statement, the 5 the prescribed notion outlined previously [8] since using latter usage a statement on the behavior of a system . It is the conventional wavy-bond notation for indeterminate worth noting that crystallization of the “racemate” can stereochemistry cannot permit the depiction of enanti- readily occur for compositions other than, and indeed omers without at least also indicating other diastereomers well away from, 50% ec. in this instance. Of note, these bond depictions of the To consider various processes, take for example the recently proposed extension to the Natta projection sys- melting point behavior of a mixture of an enantiomer pair tem, in addition to being clear and unambiguous, can also as the ec ranges from 0% - 100% for one enantiomer. readily lend themselves to stereo designations in com- The melting point diagrams may conform to a conglom- puter software. erate (alternatively, “racemic mixture” or “racemic con- glomerate”) as depicted in Figure 3, or a racemic com- pound (alternatively, “true racemate” or just “racemate”) as depicted in Figure 4. A third, very distinct, behavior is also possible, that of a solid solution (alternatively, “ra- cemic solid solution”, “mixed crystal”, or “pseudorace- mate”) with constant melting point. Whilst a plethora of terms is obviously undesirable, they do seem to, none- theless, adequately describe idealized behavior. Figure 1. Various depictions of the stereoisomeric diepox- 4The recommendations of Gawley [14] and Kagan [15] are preferred ides of limonene. with regards to the use of enantiomeric composition (ec as the percent- age of one enantiomer) over enantiomeric excess (ee). 5 3The geometric constraints of the fused-epoxide ring limits the C-1 and Arguments that the meaning of the term “racemate” is always clear C-2 stereogenic centers to just 1S,2R and 1R,2S configurations.

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