WHOI Contributions to the Scientific Literature 2004 Annual Report MBLWHOI Library Woods Hole, MA 02543 2004 Publications Received as of January 1, 2005 Entries are listed by department. Where appropriate, the WHOI Contribution number appears at the end of the citation. Earlier publications not listed in prior Annual Reports are listed here. Compiled by Ann Devenish; edited by Colleen Hurter. Reprint requests should be directed to the journal of publication, by contacting one of the authors directly, or through MBLWHOI Library Interlibrary Loan. Note: Access to online articles may be limited to journal subscribers Applied Ocean Physics & Engineering Abbot, P., S. Celuzza, I. Dyer, B. Gomes, J. Fulford, and J. Lynch. Effects of East China Sea shallow water environment on acoustic propagation. IEEE J.Oceanic Eng., 28:192-211, 2003, doi:10.1109/JOE.2003.811901. Link to online article Beardsley, Robert C., Steven J. Lentz, Robert A. Weller, Richard Limeburner, James D. Irish, and James B. Edson. Surface forcing on the southern flank of Georges Bank, February-August 1995. J.Geophys.Res., 108(C11),8007,doi:10.1029/2002JC001359, 2003. 10654 Link to online article Becker, Kyle M., and GeorgeV. Frisk. Effects of sound speed fluctuations due to internal waves in shallow water on horizontal wavenumber estimation. In: Impact of Littoral Environmental Variability on Acoustic Predictions and Sonar Performance. N. G. Pace and F. B. Jensen, eds. Boston, MA: Kluwer, :385-392, 2002. Becker, Kyle M., Subramaniam D. Rajan, and George V. Frisk. Results from the Geoacoustic Inversion Techniques Workshop using modal inverse methods. IEEE J.Oceanic Eng., 28:331-341, 2003, doi:10.1109/JOE.2003.816676. 10690 Link to online article Beron-Vera, F. J., M. G. Brown, J. C. Colosi, S. Tomsovic, A. L. Virovlyansky, M. Wolfson, and G. M. Zaslavsky. Ray dynamics in a long range acoustic propagation experiment. J.Acoust.Soc.Am., 114:1226- 1242, 2003, doi:10.1121/1.1600724. Link to online article Brasse, Heinrich, Pamela Lazaeta, Volker Rath, Katrin Schwalenberg, Wolfgang Soyer, and Volker Haak. The Bolivian Altiplano conductivity anomaly. J.Geophys.Res., 107(B5),2096,doi:10.1029/2001JB000391, 2002. Link to online article Brown, Catherine A., Yannick Huot, Michael J. Purcell, John J. Cullen, and Marion R. Lewis. Mapping coastal optical and biogeochemical variability using an autonomous underwater vehicle and a new bio-optical inversion algorithm. Limnol.Oceanogr.:Methods, 2:262-281, 2004. Link to online article Brumley, B., B. Strong, and E. Terray. Can wave direction be meaured from an AUV? In: Proceedings of the IEEE 7th Working Conference on Current Measurement Technology, March 13-15, 2003, San Diego, CA. Judith A. Rizoli, ed. New York, NY: IEEE, :140-144, 2003. Camilli, R., B. Bingham, M. Jakuba, H. Singh, and J. Whelan. Integrating in-situ chemical sampling with AUV control systems. Oceans '04, :101-109, 2004. Chaffey, Mark, Larry Bird, Jon Erickson, John Graybeal, Andy Hamilton, Kent Headley, Mike Kelley, Lance McBride, Ed Mellinger, Tim Meese, Tom O'Reilly, Walter Paul, Mike Risi, and Wayne Radochonski. MBARI's buoy based seafloor observatory design. Oceans '04, :1975-1984, 2004. - 2 - Chave, A. D., J. W. Bailey, S. Beaulieu, R. Butler, F. K. Duennebier, J. H. Filloux, D. Harris, M. Mandea, J. A. Orcutt, K. Smith, R. Stephen, P. Tarits, F. L. Vernon, and F. B. Wooding. 2003-2004 upgrades and additions to the Hawaii-2 observatory. In: Scientific Use of Submarine Cables and Related Technologies, 2003. The 3rd International Workshop on Scientific Use of Submarine Cables and Related Technologies, June 24-27, 2003, Tokyo, Japan, :14-18, 2003. Chave, A. D., F. K. Duennebier, R. Butler, R. A. Petitt, Jr., F. B. Wooding, D. Harris, J. W. Bailey, E. Hobart, J. Jolly, A. D. Bowen, and D. R. Yoerger. H2O: The Hawaii-2 observatory. In: Science-Technology Synergy for Research in the Marine Environment: Challenges for the XXI Century. L. Beranzoli, P. Favali, and G. Smriglio, eds. New York, NY: Elsevier, :83-91, 2002. Chave, A. D., B. St. Arnaud, M. Abbott, J. R. Delaney, R. Johnson, E. Lazowska, A. R. Maffei, J. A. Orcutt, and L. Smarr. A management concept for ocean observatories based on web services. Oceans '04, :2187- 2193, 2004. Chave, Alan, Gary Waterworth, Andrew Maffei, and Gene Massion. Cabled ocean observatory systems. Mar.Technol.Soc.J., 38:30-43, 2004. Chave, Alan D., Douglas S. Luther, and Christopher S. Meinen. Correction of motional electric field measurements for galvanic distortion. J.Atmos.Ocean.Technol., 21:317-330, 2004, doi:10.1175/1520-0426(2004)021<0317:COMEFM>2.0.CO;2. 10977 Link to online article Chave, Alan D., and David J. Thomson. Bounded influence magnetotelluric response function estimation. Geophys.J.Int., 157:988- 1006, 2004, doi:10.1111/j.1365-246X.2004.02203.x. 10990 Link to online article Chu, D., K. G. Foote, T. R. Hammar, L. C. Hufnagle, Jr., and J. M. Jech. Calibrating a 90-kHz multibeam sonar: illustrating protocols. Oceans '04, :438-442, 2004. 11223 Cleveland, Robin O., Anne L. Cohen, Ronald A. Roy, Hanumant Singh, and Thomas L. Szabo. Imaging coral II: Using ultrasound to image coral skeleton. Subsurface Sensing Technologies and Applications An International Journal, 5:43-61, 2004, doi:10.1023/B:SSTA.0000018446.38711.67. Link to online article - 3 - Coco, Giovanni, Tom K. Burnet, B. T. Werner, and Steve Elgar. The role of tides in beach cusp development. J.Geophys.Res., 109,C04011,doi:10.1029/2003JC002154, 2004. Link to online article Cormier, Marie-Helene, William B. F. Ryan, Anjana K. Shah, Wen Jin, Albert M. Bradley, and Dana R. Yoerger. Waxing and waning volcanism along the East Pacific Rise on a millennium time scale. Geology, 31:633-636, 2003, doi:10.1130/0091-7613(2003)031<0633:WAWVAT>2.0.CO;2. Link to online article Cowen, Edwin A., In Mei Sou, Philip L.-F. Liu, and Britt Raubenheimer. Particle image velocimetry measurements within a laboratory-generated swash zone. J.Eng.Mech., 129:1119-1129, 2003, doi:10.1061/(ASCE)0733-9399(2003)129:10(1119). 10633 Link to online article Duda, Timothy F. Acoustic mode coupling by nonlinear internal wave packets in a shelfbreak front area. IEEE J.Oceanic Eng., 29:118-125, 2004, doi:10.1109/JOE.2003.822975. 10926 Link to online article Duda, Timothy F. Finescale shear at 1660 and 2850 dbar over the Mid-Atlantic Ridge in the Eastern Brazil Basin. J.Phys.Oceanogr., 34:1281-1292, 2004, doi:10.1175/1520-0485(2004)034<1281:FSAADO>2.0.CO;2. 10892 Link to online article Edson, J. B., C. J. Zappa, J. A. Ware, W. R. McGillis, and J. E. Hare. Scalar flux profile relationships over the open ocean. J.Geophys.Res., 109,C08S09,doi:10.1029/2003JC001960, 2004. 10925 Link to online article Feddersen, Falk, R. T. Guza, and Steve Elgar. Inverse modeling of one-dimensional setup and alongshore current in the nearshore. J.Phys.Oceanogr., 34:920-933, 2004, doi:10.1175/1520-0485(2004)034<0920:IMOOSA>2.0.CO;2. 10956 Link to online article - 4 - Feuillade, C., D. Chu, and C. S. Clay. Space-time variations of the acoustic field scattered from a penetrable isovelocity wedge. J.Acoust.Soc.Am., 116:777-789, 2004, doi:10.1121/1.1772394. Link to online article Fornari, Daniel, Maurice Tivey, Hans Schouten, Michael Perfit, Dana Yoerger, Al Bradley, Margo Edwards, Rachel Haymon, Daniel Scheirer, Karen Von Damm, Timothy Shank, and Adam Soule. Submarine lava flow emplacement at the East Pacific Rise 9°50'N: implications for uppermost ocean crust stratigraphy and hydrothermal fluid circulation. In: Mid-Ocean Ridges Hydrothermal Interactions between the Lithosphere and Oceans. Christopher German, Jian Lin and Lindsay M. Parson, eds. Geophysical Monograph 148. Washington, DC: American Geophysical Union, :187-217, 2004, doi:10.1029/148GM08. 11172 Link to online article Francis, D. T. I., and K. G. Foote. Anatomy of fish-swimbladder acoustic resonances at high frequencies. In: Proceedings of the Seventh European Conference on Underwater Acoustics, ECUA 2004, 5-8 July, 2004, Delft, Netherlands, 1:403-408, 2004. 11121 Francis, David T. I., and Kenneth G. Foote. Depth-dependent target strengths of gadoids by the boundary-element method. J.Acoust.Soc.Am., 114:3136-3146, 2003, doi:10.1121/1.1619982. 10839 Link to online article Fredriksson, David W., M. Robinson Swift, James D. Irish, Igor Tsukrov, and Barbaros Celikkol. Fish cage and mooring system dynamics using physical and numerical models with field measurements. Aquacultural Eng.Jour., 27:117-146, 2003, doi:10.1016/S0144-8609(02)00043-2. Link to online article Freitag, L., and M. Stojanovic. MMSE acquisition of DSSS acoustic communication signals. Oceans '04, :14-19, 2004. Frye, Daniel, Andrew Hamilton, Mark Grosenbaugh, Walter Paul, and Mark Chaffey. Deepwater mooring designs for ocean observatory science. Mar.Technol.Soc.J., 38:7-20, 2004. Frye, Daniel, Nelson Hogg, and Carl Wunsch. A long duration mooring for ocean observation. Sea Technol., 45(6):29-39, 2004. - 5 - Garcia, Xavier, David Boerner, and Laust B. Pedersen. Electric and magnetic galvanic distortion decomposition of tensor CSAMT data. Application to data from the Buchans Mine (Newfoundland, Canada). Geophys.J.Int., 154:957-969, 2003, doi:10.1046/j.1365-246X.2003.02019.x. 10773 Link to online article Gawarkiewicz, Glen, Kenneth H. Brink, Frank Bahr, Robert C. Beardsley, Michael Caruso, James F. Lynch, and Ching-Sang Chiu. A large-amplitude meander of the shelfbreak front during summer south of New England: observations from the shelfbreak PRIMER experiment. J.Geophys.Res., 109,C03006,doi:10.1029/2002JC001468, 2004. 10736 Link to online article Geyer, W. R., P. S. Hill, and G. C. Kineke. The transport, transformation and dispersal of sediment by buoyant coastal flows.