Levenshtein Distance - Wikipedia, the Free Ency
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Problem of Fuzzy Duplicate Detection of Large Texts
The problem of fuzzy duplicate detection of large texts E V Sharapova1 and R V Sharapov1 1Vladimir State University, Orlovskaya street 23, Murom, Russia, 602264 Abstract. In the paper, considered the problem of fuzzy duplicate detection. There are given the basic approaches to detection of text duplicates–distance between strings, fuzzy search algorithms without indexing data, fuzzy search algorithms with indexing data. Thereview of existing methods for the fuzzy duplicate detection is given. The algorithm of fuzzy duplicate detection is present. The algorithm of fuzzy duplicate texts detection was implemented in the system AVTOR.NET. The paper presents the results of testing of the system.The use of filtering text, stemming and character replacement, allow the algorithm to found duplicates even in minor modified texts. 1. Introduction Today computer technology and the World Wide Web have become part of our lives. Billions of users use the Internet every day. The Internet contains a huge number of documents. Many books are transformed in a digital form. Users can read books, articles, newspapers directly from computers and electronic gadgets. Today, in the Internet there are many studying materials: lectures, textbooks, methodical literature, etc. There are big collections of essays, course and diploma projects and scientific dissertations. It leads to problem un-controlling coping of information. The text of document may be a part of another document, formed from several documents, may be modified part of another document (with a change of words to synonyms, endings, times, etc.). In this way, the document is fuzzy duplicate of other documents. There is the problem of text checking to presence of fussy duplicates. -
The One-Way Communication Complexity of Hamming Distance
THEORY OF COMPUTING, Volume 4 (2008), pp. 129–135 http://theoryofcomputing.org The One-Way Communication Complexity of Hamming Distance T. S. Jayram Ravi Kumar∗ D. Sivakumar∗ Received: January 23, 2008; revised: September 12, 2008; published: October 11, 2008. Abstract: Consider the following version of the Hamming distance problem for ±1 vec- n √ n √ tors of length n: the promise is that the distance is either at least 2 + n or at most 2 − n, and the goal is to find out which of these two cases occurs. Woodruff (Proc. ACM-SIAM Symposium on Discrete Algorithms, 2004) gave a linear lower bound for the randomized one-way communication complexity of this problem. In this note we give a simple proof of this result. Our proof uses a simple reduction from the indexing problem and avoids the VC-dimension arguments used in the previous paper. As shown by Woodruff (loc. cit.), this implies an Ω(1/ε2)-space lower bound for approximating frequency moments within a factor 1 + ε in the data stream model. ACM Classification: F.2.2 AMS Classification: 68Q25 Key words and phrases: One-way communication complexity, indexing, Hamming distance 1 Introduction The Hamming distance H(x,y) between two vectors x and y is defined to be the number of positions i such that xi 6= yi. Let GapHD denote the following promise problem: the input consists of ±1 vectors n √ n √ x and y of length n, together with the promise that either H(x,y) ≤ 2 − n or H(x,y) ≥ 2 + n, and the goal is to find out which of these two cases occurs. -
Weighted Automata Computation of Edit Distances with Consolidations and Fragmentations Mathieu Giraud, Florent Jacquemard
Weighted Automata Computation of Edit Distances with Consolidations and Fragmentations Mathieu Giraud, Florent Jacquemard To cite this version: Mathieu Giraud, Florent Jacquemard. Weighted Automata Computation of Edit Distances with Consolidations and Fragmentations. Information and Computation, Elsevier, In press, 10.1016/j.ic.2020.104652. hal-01857267v4 HAL Id: hal-01857267 https://hal.inria.fr/hal-01857267v4 Submitted on 16 Oct 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Weighted Automata Computation of Edit Distances with Consolidations and Fragmentations Mathieu Girauda, Florent Jacquemardb aCRIStAL, UMR 9189 CNRS, Univ. Lille, France. [email protected] bINRIA, Paris, France. [email protected] Abstract We study edit distances between strings, based on operations such as character substi- tutions, insertions, deletions and additionally consolidations and fragmentations. The two latter operations transform a sequence of characters into one character and vice- versa. They correspond to the compression and expansion in Dynamic Time-Warping algorithms for speech recognition and are also used for the formal analysis of written music. We show that such edit distances are not computable in general, and propose weighted automata constructions to compute an edit distance taking into account both consolidations and deletions, or both fragmentations and insertions. -
Headprint: Detecting Anomalous Communications Through Header-Based Application Fingerprinting
HeadPrint: Detecting Anomalous Communications through Header-based Application Fingerprinting Riccardo Bortolameotti Thijs van Ede Andrea Continella University of Twente University of Twente UC Santa Barbara [email protected] [email protected] [email protected] Thomas Hupperich Maarten H. Everts Reza Rafati University of Muenster University of Twente Bitdefender [email protected] [email protected] [email protected] Willem Jonker Pieter Hartel Andreas Peter University of Twente Delft University of Technology University of Twente [email protected] [email protected] [email protected] ABSTRACT 1 INTRODUCTION Passive application fingerprinting is a technique to detect anoma- Data breaches are a major concern for enterprises across all indus- lous outgoing connections. By monitoring the network traffic, a tries due to the severe financial damage they cause [25]. Although security monitor passively learns the network characteristics of the many enterprises have full visibility of their network traffic (e.g., applications installed on each machine, and uses them to detect the using TLS-proxies) and they stop many cyber attacks by inspect- presence of new applications (e.g., malware infection). ing traffic with different security solutions (e.g., IDS, IPS, Next- In this work, we propose HeadPrint, a novel passive fingerprint- Generation Firewalls), attackers are still capable of successfully ing approach that relies only on two orthogonal network header exfiltrating data. Data exfiltration often occurs over network covert characteristics to distinguish applications, namely the order of the channels, which are communication channels established by attack- headers and their associated values. Our approach automatically ers to hide the transfer of data from a security monitor. -
Author Guidelines for 8
I.J. Information Technology and Computer Science, 2014, 01, 68-75 Published Online December 2013 in MECS (http://www.mecs-press.org/) DOI: 10.5815/ijitcs.2014.01.08 FSM Circuits Design for Approximate String Matching in Hardware Based Network Intrusion Detection Systems Dejan Georgiev Faculty of Electrical Engineering and Information Technologies , Skopje, Macedonia E-mail: [email protected] Aristotel Tentov Faculty of Electrical Engineering and Information Technologies, Skopje, Macedonia E-mail: [email protected] Abstract— In this paper we present a logical circuits to perform a check to a possible variations of the design for approximate content matching implemented content because of so named "evasion" techniques. as finite state machines (FSM). As network speed Software systems have processing limitations in that increases the software based network intrusion regards. On the other hand hardware platforms, like detection and prevention systems (NIDPS) are lagging FPGA offer efficient implementation for high speed behind requirements in throughput of so called deep network traffic. package inspection - the most exhaustive process of Excluding the regular expressions as special case ,the finding a pattern in package payloads. Therefore, there problem of approximate content matching basically is a is a demand for hardware implementation. k-differentiate problem of finding a content Approximate content matching is a special case of content finding and variations detection used by C c1c2.....cm in a string T t1t2.......tn such as the "evasion" techniques. In this research we will enhance distance D(C,X) of content C and all the occurrences of the k-differentiate problem with "ability" to detect a a substring X is less or equal to k , where k m n . -
Comparison of Levenshtein Distance Algorithm and Needleman-Wunsch Distance Algorithm for String Matching
COMPARISON OF LEVENSHTEIN DISTANCE ALGORITHM AND NEEDLEMAN-WUNSCH DISTANCE ALGORITHM FOR STRING MATCHING KHIN MOE MYINT AUNG M.C.Sc. JANUARY2019 COMPARISON OF LEVENSHTEIN DISTANCE ALGORITHM AND NEEDLEMAN-WUNSCH DISTANCE ALGORITHM FOR STRING MATCHING BY KHIN MOE MYINT AUNG B.C.Sc. (Hons:) A Dissertation Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Computer Science (M.C.Sc.) University of Computer Studies, Yangon JANUARY2019 ii ACKNOWLEDGEMENTS I would like to take this opportunity to express my sincere thanks to those who helped me with various aspects of conducting research and writing this thesis. Firstly, I would like to express my gratitude and my sincere thanks to Prof. Dr. Mie Mie Thet Thwin, Rector of the University of Computer Studies, Yangon, for allowing me to develop this thesis. Secondly, my heartfelt thanks and respect go to Dr. Thi Thi Soe Nyunt, Professor and Head of Faculty of Computer Science, University of Computer Studies, Yangon, for her invaluable guidance and administrative support, throughout the development of the thesis. I am deeply thankful to my supervisor, Dr. Ah Nge Htwe, Associate Professor, Faculty of Computer Science, University of Computer Studies, Yangon, for her invaluable guidance, encouragement, superior suggestion and supervision on the accomplishment of this thesis. I would like to thank Daw Ni Ni San, Lecturer, Language Department of the University of Computer Studies, Yangon, for editing my thesis from the language point of view. I thank all my teachers who taught and helped me during the period of studies in the University of Computer Studies, Yangon. Finally, I am grateful for all my teachers who have kindly taught me and my friends from the University of Computer Studies, Yangon, for their advice, their co- operation and help for the completion of thesis. -
Algorithms for Approximate String Matching Petro Protsyk (28 October 2016) Agenda
Algorithms for approximate string matching Petro Protsyk (28 October 2016) Agenda • About ZyLAB • Overview • Algorithms • Brute-force recursive Algorithm • Wagner and Fischer Algorithm • Algorithms based on Automaton • Bitap • Q&A About ZyLAB ZyLAB is a software company headquartered in Amsterdam. In 1983 ZyLAB was the first company providing a full-text search program for MS-DOS called ZyINDEX In 1991 ZyLAB released ZyIMAGE software bundle that included a fuzzy string search algorithm to overcome scanning and OCR errors. Currently ZyLAB develops eDiscovery and Information Governance solutions for On Premises, SaaS and Cloud installations. ZyLAB continues to develop new versions of its proprietary full-text search engine. 3 About ZyLAB • We develop for Windows environments only, including Azure • Software developed in C++, .Net, SQL • Typical clients are from law enforcement, intelligence, fraud investigators, law firms, regulators etc. • FTC (Federal Trade Commission), est. >50 TB (peak 2TB per day) • US White House (all email of presidential administration), est. >20 TB • Dutch National Police, est. >20 TB 4 ZyLAB Search Engine Full-text search engine • Boolean and Proximity search operators • Support for Wildcards, Regular Expressions and Fuzzy search • Support for numeric and date searches • Search in document fields • Near duplicate search 5 ZyLAB Search Engine • Highly parallel indexing and searching • Can index Terabytes of data and millions of documents • Can be distributed • Supports 100+ languages, Unicode characters 6 Overview Approximate string matching or fuzzy search is the technique of finding strings in text or dictionary that match given pattern approximately with respect to chosen edit distance. The edit distance is the number of primitive operations necessary to convert the string into an exact match. -
Fault Tolerant Computing CS 530 Information Redundancy: Coding Theory
Fault Tolerant Computing CS 530 Information redundancy: Coding theory Yashwant K. Malaiya Colorado State University April 3, 2018 1 Information redundancy: Outline • Using a parity bit • Codes & code words • Hamming distance . Error detection capability . Error correction capability • Parity check codes and ECC systems • Cyclic codes . Polynomial division and LFSRs 4/3/2018 Fault Tolerant Computing ©YKM 2 Redundancy at the Bit level • Errors can bits to be flipped during transmission or storage. • An extra parity bit can detect if a bit in the word has flipped. • Some errors an be corrected if there is enough redundancy such that the correct word can be guessed. • Tukey: “bit” 1948 • Hamming codes: 1950s • Teletype, ASCII: 1960: 7+1 Parity bit • Codes are widely used. 304,805 letters in the Torah Redundancy at the Bit level Even/odd parity (1) • Errors can bits to be flipped during transmission/storage. • Even/odd parity: . is basic method for detecting if one bit (or an odd number of bits) has been switched by accident. • Odd parity: . The number of 1-bit must add up to an odd number • Even parity: . The number of 1-bit must add up to an even number Even/odd parity (2) • The it is known which parity it is being used. • If it uses an even parity: . If the number of of 1-bit add up to an odd number then it knows there was an error: • If it uses an odd: . If the number of of 1-bit add up to an even number then it knows there was an error: • However, If an even number of 1-bit is flipped the parity will still be the same. -
Sequence Distance Embeddings
Sequence Distance Embeddings by Graham Cormode Thesis Submitted to the University of Warwick for the degree of Doctor of Philosophy Computer Science January 2003 Contents List of Figures vi Acknowledgments viii Declarations ix Abstract xi Abbreviations xii Chapter 1 Starting 1 1.1 Sequence Distances . ....................................... 2 1.1.1 Metrics ............................................ 3 1.1.2 Editing Distances ...................................... 3 1.1.3 Embeddings . ....................................... 3 1.2 Sets and Vectors ........................................... 4 1.2.1 Set Difference and Set Union . .............................. 4 1.2.2 Symmetric Difference . .................................. 5 1.2.3 Intersection Size ...................................... 5 1.2.4 Vector Norms . ....................................... 5 1.3 Permutations ............................................ 6 1.3.1 Reversal Distance ...................................... 7 1.3.2 Transposition Distance . .................................. 7 1.3.3 Swap Distance ....................................... 8 1.3.4 Permutation Edit Distance . .............................. 8 1.3.5 Reversals, Indels, Transpositions, Edits (RITE) . .................... 9 1.4 Strings ................................................ 9 1.4.1 Hamming Distance . .................................. 10 1.4.2 Edit Distance . ....................................... 10 1.4.3 Block Edit Distances . .................................. 11 1.5 Sequence Distance Problems . ................................. -
Dictionary Look-Up Within Small Edit Distance
Dictionary Lo okUp Within Small Edit Distance Ab dullah N Arslan and Omer Egeciog lu Department of Computer Science University of California Santa Barbara Santa Barbara CA USA farslanomergcsucsbedu Abstract Let W b e a dictionary consisting of n binary strings of length m each represented as a trie The usual dquery asks if there exists a string in W within Hamming distance d of a given binary query string q We present an algorithm to determine if there is a memb er in W within edit distance d of a given query string q of length m The metho d d+1 takes time O dm in the RAM mo del indep endent of n and requires O dm additional space Intro duction Let W b e a dictionary consisting of n binary strings of length m each A dquery asks if there exists a string in W within Hamming distance d of a given binary query string q Algorithms for answering dqueries eciently has b een a topic of interest for some time and have also b een studied as the approximate query and the approximate query retrieval problems in the literature The problem was originally p osed by Minsky and Pap ert in in which they asked if there is a data structure that supp orts fast dqueries The cases of small d and large d for this problem seem to require dierent techniques for their solutions The case when d is small was studied by Yao and Yao Dolev et al and Greene et al have made some progress when d is relatively large There are ecient algorithms only when d prop osed by Bro dal and Venkadesh Yao and Yao and Bro dal and Gasieniec The small d case has applications -
Approximate String Matching with Reduced Alphabet
Approximate String Matching with Reduced Alphabet Leena Salmela1 and Jorma Tarhio2 1 University of Helsinki, Department of Computer Science [email protected] 2 Aalto University Deptartment of Computer Science and Engineering [email protected] Abstract. We present a method to speed up approximate string match- ing by mapping the factual alphabet to a smaller alphabet. We apply the alphabet reduction scheme to a tuned version of the approximate Boyer– Moore algorithm utilizing the Four-Russians technique. Our experiments show that the alphabet reduction makes the algorithm faster. Especially in the k-mismatch case, the new variation is faster than earlier algorithms for English data with small values of k. 1 Introduction The approximate string matching problem is defined as follows. We have a pat- tern P [1...m]ofm characters drawn from an alphabet Σ of size σ,atextT [1...n] of n characters over the same alphabet, and an integer k. We need to find all such positions i of the text that the distance between the pattern and a sub- string of the text ending at that position is at most k.Inthek-difference problem the distance between two strings is the standard edit distance where substitu- tions, deletions, and insertions are allowed. The k-mismatch problem is a more restricted one using the Hamming distance where only substitutions are allowed. Among the most cited papers on approximate string matching are the classical articles [1,2] by Esko Ukkonen. Besides them he has studied this topic extensively [3,4,5,6,7,8,9,10,11]. -
Automating Error Frequency Analysis Via the Phonemic Edit Distance Ratio
JSLHR Research Note Automating Error Frequency Analysis via the Phonemic Edit Distance Ratio Michael Smith,a Kevin T. Cunningham,a and Katarina L. Haleya Purpose: Many communication disorders result in speech corresponds to percent segments with these phonemic sound errors that listeners perceive as phonemic errors. errors. Unfortunately, manual methods for calculating phonemic Results: Convergent validity between the manually calculated error frequency are prohibitively time consuming to use in error frequency and the automated edit distance ratio was large-scale research and busy clinical settings. The purpose excellent, as demonstrated by nearly perfect correlations of this study was to validate an automated analysis based and negligible mean differences. The results were replicated on a string metric—the unweighted Levenshtein edit across 2 speech samples and 2 computation applications. distance—to express phonemic error frequency after left Conclusions: The phonemic edit distance ratio is well hemisphere stroke. suited to estimate phonemic error rate and proves itself Method: Audio-recorded speech samples from 65 speakers for immediate application to research and clinical practice. who repeated single words after a clinician were transcribed It can be calculated from any paired strings of transcription phonetically. By comparing these transcriptions to the symbols and requires no additional steps, algorithms, or target, we calculated the percent segments with a combination judgment concerning alignment between target and production. of phonemic substitutions, additions, and omissions and We recommend it as a valid, simple, and efficient substitute derived the phonemic edit distance ratio, which theoretically for manual calculation of error frequency. n the context of communication disorders that affect difference between a series of targets and a series of pro- speech production, sound error frequency is often ductions.