Targeting RTK Signaling Pathways in Cancer
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Paracrine and Autocrine Functions of PDGF in Malignant Disease
! " #$ %&#'( )*#+& (%( ,'-./'%(%' (+'.,' (+( 00 Paracrine and autocrine functions of PDGF in malignant disease BY TOBIAS SJÖBLOM Dissertation for the Degree of Doctor of Philosophy (Faculty of Medicine) in Molecular Cell Biology presented at Uppsala University in 2002. ABSTRACT Sjöblom T. 2002. Paracrine and autocrine functions of PDGF in malignant disease. Acta Universitatis Upsaliensis. Comprehensive Summaries of Uppsala Dissertations from the Faculty of Medicine 1190. 62pp. Uppsala. ISBN 91-554-5420-8. Growth factors and their receptors are frequently activated by mutations in human cancer. Platelet-derived growth factor (PDGF)-B and its tyrosine kinase receptor, the PDGF β- receptor, have been implicated in autocrine transformation as well as paracrine stimulation of tumor growth. The availability of clinically useful antagonists motivates evaluation of PDGF inhibition in these diseases. In chronic myelomonocytic leukemia with t(5;12), parts of the transcription factor TEL and the PDGF β-receptor are fused, generating a constitutively signaling protein. Oligomerization and unique phosphorylation pattern of TEL-PDGFβR was demonstrated, as well as the transforming activity of TEL-PDGFβR, which was sensitive to PDGF β-receptor kinase inhibition. Dermatofibrosarcoma protuberans (DFSP) is characterized by a translocation involving the collagen Iα1 and PDGF B-chain genes. The COLIA1-PDGFB fusion protein was processed to mature PDGF-BB and transformed fibroblasts in culture. The PDGF antagonist STI571 inhibited growth of COLIA1-PDGFB transfected cells and primary DFSP cells in vitro and in vivo through induction of apoptosis. Paracrine effects of PDGF-DD, a ligand for the PDGF β-receptor, were evaluated in a murine model of malignant melanoma. PDGF-DD production accelerated tumor growth and altered the vascular morphology in experimental melanomas. -
Human MAPK10 Peptide (DAG-P1762) This Product Is for Research Use Only and Is Not Intended for Diagnostic Use
Human MAPK10 peptide (DAG-P1762) This product is for research use only and is not intended for diagnostic use. PRODUCT INFORMATION Antigen Description The protein encoded by this gene is a member of the MAP kinase family. MAP kinases act as an integration point for multiple biochemical signals, and are involved in a wide variety of cellular processes such as proliferation, differentiation, transcription regulation and development. This protein is a neuronal-specific form of c-Jun N-terminal kinases (JNKs). Through its phosphorylation and nuclear localization, this kinase plays regulatory roles in the signaling pathways during neuronal apoptosis. Beta-arrestin 2, a receptor-regulated MAP kinase scaffold protein, is found to interact with, and stimulate the phosphorylation of this kinase by MAP kinase kinase 4 (MKK4). Cyclin-dependent kianse 5 can phosphorylate, and inhibit the activity of this kinase, which may be important in preventing neuronal apoptosis. Four alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008] Specificity Specific to a subset of neurons in the nervous system. Present in the hippocampus and areas, cerebellum, striatum, brain stem, and weakly in the spinal cord. Very weak expression in testis and kidney. Nature Synthetic Expression System N/A Purity 70 - 90% by HPLC. Conjugate Unconjugated Sequence Similarities Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.Contains 1 protein kinase domain. Cellular Localization Cytoplasm. Procedure None Format Liquid Preservative None Storage Shipped at 4°C. Upon delivery aliquot and store at -20°C or -80°C. Avoid repeated freeze / thaw cycles. -
Overview and Perspective on RTK Heterointeractions Michael D
Review Cite This: Chem. Rev. 2019, 119, 5881−5921 pubs.acs.org/CR The RTK Interactome: Overview and Perspective on RTK Heterointeractions Michael D. Paul and Kalina Hristova* Department of Materials Science and Engineering, Institute for NanoBioTechnology, and Program in Molecular Biophysics, Johns Hopkins University, Baltimore, Maryland 21218, United States ABSTRACT: Receptor tyrosine kinases (RTKs) play important roles in cell growth, motility, differentiation, and survival. These single-pass membrane proteins are grouped into subfamilies based on the similarity of their extracellular domains. They are generally thought to be activated by ligand binding, which promotes homodimerization and then autophosphorylation in trans. However, RTK interactions are more complicated, as RTKs can interact in the absence of ligand and heterodimerize within and across subfamilies. 19 Here, we review the known cross-subfamily RTK heterointeractions and their possible biological implications, as well as the methodologies which have been used to study them. Moreover, we demonstrate how thermodynamic models can be used to study RTKs and to explain many of the complicated biological effects which have been described in the literature. Finally, we discuss the concept of the RTK interactome: a putative, extensive network of interactions between the RTKs. This RTK interactome can produce unique signaling outputs; can amplify, inhibit, and modify signaling; and can allow for signaling backups. The existence of the RTK interactome could provide an explanation for the irreproducibility of experimental data from different studies and for the failure of some RTK inhibitors to produce the desired therapeutic effects. We argue that a deeper knowledge of RTK interactome thermodynamics can lead to a better understanding of fundamental RTK signaling processes in health and disease. -
A Molecular Dynamics Simulation Study for Variant Drug Responses Due to FMS-Like Tyrosine Kinase 3 Cite This: RSC Adv.,2017,7, 29871 G697R Mutation†
RSC Advances View Article Online PAPER View Journal | View Issue A molecular dynamics simulation study for variant drug responses due to FMS-like tyrosine kinase 3 Cite this: RSC Adv.,2017,7, 29871 G697R mutation† Chien-Cheng Lee,a Yu-Chung Chuang,b Yu-Lin Liub and Chia-Ning Yang *b FMS-like tyrosine kinase 3 (FLT3) is an attractive target for acute myeloid leukemia. Recent studies have suggested that the application of small-molecule kinase inhibitors is a promising treatment strategy for patients with primary activating mutations of FLT3; however, the development of secondary mutations, including those of A627T, N676D, F691I, and G697R, that confer acquired resistance to kinase inhibitors has become a severe problem. In this study, we conducted a series of molecular dynamics simulations on PKC412- and sorafenib-bound FLT3 kinases and different apo forms of the FLT3 kinase to explain the minor and severe G697R mutation-induced resistance to sorafenib and PKC412, respectively. Structural analysis on our simulation results revealed that the type II kinase inhibitor sorafenib (IC50 ¼ 9 nM) Creative Commons Attribution 3.0 Unported Licence. assesses its binding site through either the adenine pocket entrance or the back pocket entrance, whereas the type I kinase inhibitor PKC412 (IC50 ¼ 35 nM) intercalates to its binding site from the front pocket entrance. The G697 residue is located at the end of the FLT3 kinase hinge segment and is close to the front and adenine pockets. In G697R mutation where the substituted R697 residue affects both the front and adenine pocket entrances in different manners, sorafenib may approach its binding site Received 11th April 2017 through the back pocket entrance, whereas PKC412 is blocked by the FLT3 kinase. -
Marine Drugs
marine drugs Article Neuroprotective Effect of Carotenoid-Rich Enteromorpha prolifera Extract via TrkB/Akt Pathway against Oxidative Stress in Hippocampal Neuronal Cells Seung Yeon Baek and Mee Ree Kim * Department of Food and Nutrition, Chungnam National University, Daejeon 34134, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-42-821-6837; Fax: +82-42-821-8887 Received: 27 June 2020; Accepted: 17 July 2020; Published: 19 July 2020 Abstract: In this study, we found that E. prolifera extract (EAEP) exhibits neuroprotective effects in oxidative stress-induced neuronal cells. EAEP improved cell viability as well as attenuated the formation of intracellular reactive oxygen species (ROS) and apoptotic bodies in glutamate-treated hippocampal neuronal cells (HT-22). Furthermore, EAEP improved the expression of brain-derived neurotrophic factor (BDNF) and antioxidant enzymes such as heme oxygenase-1 (HO-1), NAD(P)H quinine oxidoreductase-1 (NQO-1), and glutamate–cysteine ligase catalytic subunit (GCLC) via the tropomyosin-related kinase receptor B/ protein kinase B (TrkB/Akt) signaling pathway. In contrast, the pre-incubation of K252a, a TrkB inhibitor, or MK-2206, an Akt-selective inhibitor, ameliorated the neuroprotective effects of EAEP in oxidative stress-induced neuronal cells. These results suggest that EAEP protects neuronal cells against oxidative stress-induced apoptosis by upregulating the expression of BDNF and antioxidant enzymes via the activation of the TrkB/Akt pathway. In conclusion, such an effect of EAEP, which is rich in carotenoid-derived compounds, may justify its application as a food supplement in the prevention and treatment of neurodegenerative disorders. Keywords: Enteromorpha prolifera; oxidative stress; apoptosis; BDNF; TrkB/Akt pathway 1. -
Short-Term Rapamycin Persistently Improves Cardiac Function After Cessation of Treatment in Aged Male and Female Mice
Short-term rapamycin persistently improves cardiac function after cessation of treatment in aged male and female mice. Ellen Quarles A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy University of Washington 2017 Reading Committee: Peter Rabinovitch, Chair Michael MacCoss David Marcinek Program Authorized to Offer Degree: Pathology © Copyright 2017 Ellen Quarles University of Washington Abstract Short-term rapamycin persistently improves cardiac function after cessation of treatment in aged male and female mice. Ellen Quarles Chair of the Supervisory Committee: Peter Rabinovitch, Professor and Vice Chair of Research Department of Pathology Cardiac aging is an intrinsic process that results in impaired cardiac function and dysregulation of cellular and molecular quality control mechanisms. These effects are evident in the decline of diastolic function, increase in left ventricular hypertrophy, metabolic substrate shifts, and alterations to the cardiac proteome. This thesis covers the quality control mechanisms that are associated with cardiac aging, results from an anti-aging intervention in aged mice, and a review of mitochondrial dysfunction in the heart. Chapter one is a review of the quality control mechanisms in aging myocardium. Chapter two consists of the results of several mouse experiments that compare the cardiac function, proteomes, and metabolomes of aged and young controls, along with rapamycin treated aged mice. The novelty of this study comes from the inclusion of a group of animals treated only transiently with the drug, then followed for eight weeks post-drug-removal. This persistence cohort may hold clues to deriving long-lasting benefits of rapamycin with only transient treatment. -
The Role of Neurotrophin Receptors in Female Germ-Cell Survival in Mouse and Human Norah Spears1,*, Michael D
Research article 5481 The role of neurotrophin receptors in female germ-cell survival in mouse and human Norah Spears1,*, Michael D. Molinek1, Lynne L. L. Robinson2, Norma Fulton2, Helen Cameron1, Kohji Shimoda1, Evelyn E. Telfer3, Richard A. Anderson2 and David J. Price1 1Biomedical Sciences, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK 2Medical Research Council Human Reproductive Sciences Unit, Centre for Reproductive Biology, The University of Edinburgh Chancellor’s Building, 49 Little France Crescent, Edinburgh EH16 4SA, UK 3Institute of Cellular and Molecular Biology, University of Edinburgh, Darwin Building, Kings Buildings, Edinburgh, UK *Author for correspondence (e-mail: [email protected]) Accepted 4 July 2003 Development 130, 5481-5491 © 2003 The Company of Biologists Ltd doi:10.1242/dev.00707 Summary During mammalian ovary formation, the production of follicle formation in the mouse. In situ hybridisation ovarian follicles is accompanied by an enormous loss of showed that TrkB was expressed primarily in the germ cells germ cells. It is not known how this loss is regulated. We before and after follicle formation. Mouse neonatal and have investigated the role of the Trk tyrosine kinase fetal ovaries and human fetal ovaries were cultured in the receptors, primarily TrkB, in this process. The ovaries of presence of K252a, a potent inhibitor of all Trk receptors. TrkB–/– and TrkC–/– mice with a mixed (129Sv × C57BL/6) In mice, K252a inhibited the survival of germ cells in newly genetic background were examined shortly after birth. formed (primordial) follicles. This effect was rescued by the Around 50% of TrkB–/– mice had grossly abnormal ovaries addition of basic fibroblast growth factor (bFGF) to the that contained greatly reduced numbers of follicles. -
Chemical Biology of Natural Indolocarbazole Products: 30 Years Since the Discovery of Staurosporine
The Journal of Antibiotics (2009) 62, 17–26 & 2009 Japan Antibiotics Research Association All rights reserved 0021-8820/09 $32.00 www.nature.com/ja REVIEW ARTICLE Chemical biology of natural indolocarbazole products: 30 years since the discovery of staurosporine Hirofumi Nakano and Satoshi O¯ mura Staurosporine was discovered at the Kitasato Institute in 1977 while screening for microbial alkaloids using chemical detection methods. It was during the same era that protein kinase C was discovered and oncogene v-src was shown to have protein kinase activity. Staurosporine was first isolated from a culture of Actinomyces that originated in a soil sample collected in Mizusawa City, Japan. Thereafter, indolocarbazole compounds have been isolated from a variety of organisms. The biosynthesis of staurosporine and related indolocarbazoles was finally elucidated during the past decade through genetic and biochemical studies. Subsequently, several novel indolocarbazoles have been produced using combinatorial biosynthesis. In 1986, 9 years since its discovery, staurosporine and related indolocarbazoles were shown to be nanomolar inhibitors of protein kinases. They can thus be viewed as forerunners of today’s crop of novel anticancer drugs. The finding led many pharmaceutical companies to search for selective protein kinase inhibitors by screening natural products and through chemical synthesis. In the 1990s, imatinib, a Bcr-Abl tyrosine kinase inhibitor, was synthesized and, following human clinical trials for chronic myelogenous leukemia, it was approved for use in the USA in 2001. In 1992, mammalian topoisomerases were shown to be targets for indolocarbazoles. This opened up new possibilities in that indolocarbazole compounds could selectively interact with ATP- binding sites of not only protein kinases but also other proteins that had slight differences in ATP-binding sites. -
Α-Tocopherol at Nanomolar Concentration Protects PC12 Cells from Hydrogen Peroxide-Induced Death and Modulates Protein Kinase Activities
Int. J. Mol. Sci. 2012, 13, 11543-11568; doi:10.3390/ijms130911543 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Article α-Tocopherol at Nanomolar Concentration Protects PC12 Cells from Hydrogen Peroxide-Induced Death and Modulates Protein Kinase Activities Irina O. Zakharova, Tatyana V. Sokolova, Liubov V. Bayunova, Yulia A. Vlasova, Maria P. Rychkova and Natalia F. Avrova * Department of Comparative Neurochemistry, Institute of Evolutionary Physiology and Biochemistry of Russian Academy of Sciences, Thorez avenue, 44, Saint-Petersburg 194223, Russia; E-Mails: [email protected] (I.O.Z.); [email protected] (T.V.S.); [email protected] (L.V.B.); [email protected] (Y.A.V.); [email protected] (M.P.R.) * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +7-812-552-7901; Fax: +7-812-552-3012. Received: 9 July 2012; in revised form: 23 August 2012 / Accepted: 4 September 2012 / Published: 14 September 2012 Abstract: The aim of this work was to compare protective and anti-apoptotic effects of α-tocopherol at nanomolar and micromolar concentrations against 0.2 mM H2O2-induced toxicity in the PC12 neuronal cell line and to reveal protein kinases that contribute to α-tocopherol protective action. The protection by 100 nM α-tocopherol against H2O2-induced PC12 cell death was pronounced if the time of pre-incubation with α-tocopherol was 3–18 h. For the first time, the protective effect of α-tocopherol was shown to depend on its concentration in the nanomolar range (1 nM < 10 nM < 100 nM), if the pre-incubation time was 18 h. -
Network Analysis Reveals Abberant Cell Signaling In
NETWORK ANALYSIS REVEALS ABBERANT CELL SIGNALING IN MURINE DIABETIC KIDNEY By PRIYANKA GOPAL Submitted in partial fulfillment of the requirements Master of Science Thesis Advisor: Michael Simonson PhD Department of Physiology and Biophysics CASE WESTERN RESERVE UNIVERSITY May, 2015 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the thesis/dissertation of Priyanka Gopal Candidate for the degree of Master of Science Committee Chair Dr. William P. Schilling, PhD Committee Member Dr. Christopher P. Ford, PhD Committee Member Dr. Jeffrey L. Garvin, PhD Committee Member Dr. Michael S. Simonson, PhD Date of Defense 03/16/2015 *We also certify that written approval has been obtained for any proprietary material contained therein. Table of Contents Table of Contents………………………………………………………………………...iii List of Tables……………………………………………………………………………..iv List of Figures…………………………………………………………………………….v Acknowledgements………………………………………………………………………vi List of Abbreviations…………………………………………………………………....vii Abstract…………………………………………………………………..........................x Introduction…………….……………………………………………...............................1 Research Objectives and Specific Aims………………………………………………….5 Materials and Methods……………………………………………………………………6 Results……………………………………………………………………………………11 Discussion………………………………………………………………………………..16 Summary and Future Directions…………………………………………………………21 Bibliography……………………………………………………………………………..37 iii List of Tables Table 1 Quantitative PCR measurements of mRNA for putative first messengers altered in 16 week -
Paracrine-Induced Response State Antiviral-Activated Dendritic Cells: A
Antiviral-Activated Dendritic Cells: A Paracrine-Induced Response State Antonio V. Bordería, Boris M. Hartmann, Ana Fernandez-Sesma, Thomas M. Moran and Stuart C. Sealfon This information is current as of September 24, 2021. J Immunol 2008; 181:6872-6881; ; doi: 10.4049/jimmunol.181.10.6872 http://www.jimmunol.org/content/181/10/6872 Downloaded from References This article cites 53 articles, 22 of which you can access for free at: http://www.jimmunol.org/content/181/10/6872.full#ref-list-1 Why The JI? Submit online. http://www.jimmunol.org/ • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication *average by guest on September 24, 2021 Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2008 by The American Association of Immunologists All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology Antiviral-Activated Dendritic Cells: A Paracrine-Induced Response State1 Antonio V. Bordería,2* Boris M. Hartmann,2† Ana Fernandez-Sesma,* Thomas M. Moran,* and Stuart C. Sealfon3†‡ Infection of immature dendritic cells (DCs) by virus stimulates their maturation into APC. -
CD44 and Integrin Matrix Receptors Participate in Cartilage Homeostasis
CMLS, Cell. Mol. Life Sci. 59 (2002) 36–44 1420-682X/02/010036-09 $ 1.50 + 0.20/0 © Birkhäuser Verlag, Basel, 2002 CMLS Cellular and Molecular Life Sciences CD44 and integrin matrix receptors participate in cartilage homeostasis W. Knudson a, * and R. F. Loeser a, b a Department of Biochemistry, Rush Medical College, Rush-Presbyterian-St. Luke’s Medical Center, Chicago, Illinois 60612 (USA), Fax +1 312 942 3053, e-mail: [email protected] b Section of Rheumatology, Rush Medical College, Rush-Presbyterian-St. Luke’s Medical Center, Chicago, Illinois 60612 (USA) Abstract. Articular chondrocytes express the matrix re- to detect changes in matrix composition or to function as ceptors CD44 and integrins. Both of these receptors ex- mechanotransducers. Disruption of CD44 or integrin- hibit interactions with adjacent extracellular matrix mediated cell-matrix interactions, either experimentally macromolecules. In addition, both integrins and CD44 induced or when present in osteoarthritis, have profound have the capacity for signal transduction as well as mod- effects on cartilage metabolism. Thus, CD44 and integrin ulated interactions with the actin cytoskeleton. As such, receptors play a critical role in maintaining cartilage both receptor families provide the chondrocytes a means homeostasis. Key words. CD44; hyaluronan; proteoglycan; integrin; collagen; fibronectin; chondrocyte. In many tissues, carefully regulated cell-matrix interac- drocytes, CD44 represents the primary receptor responsi- tions are responsible for maintaining tissue homeostasis ble for hyaluronan (HA) binding [4, 9]. However, in carti- [1–4]. Most cell-matrix interactions are mediated via lage, HA is seldom present as a pure molecule. Often more transmembrane receptors. Articular chondrocytes have than 50 aggrecan proteoglycan (PG) monomers together been shown to express both integrin [5–7]) as well as with an associated link protein become bound to a single nonintegrin (e.g., annexin V and CD44) extracellular ma- filament of HA [13].