Hydraulic Conductance, Capacitance, and Embolism Resistance
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Reconstructing the Basal Angiosperm Phylogeny: Evaluating Information Content of Mitochondrial Genes
55 (4) • November 2006: 837–856 Qiu & al. • Basal angiosperm phylogeny Reconstructing the basal angiosperm phylogeny: evaluating information content of mitochondrial genes Yin-Long Qiu1, Libo Li, Tory A. Hendry, Ruiqi Li, David W. Taylor, Michael J. Issa, Alexander J. Ronen, Mona L. Vekaria & Adam M. White 1Department of Ecology & Evolutionary Biology, The University Herbarium, University of Michigan, Ann Arbor, Michigan 48109-1048, U.S.A. [email protected] (author for correspondence). Three mitochondrial (atp1, matR, nad5), four chloroplast (atpB, matK, rbcL, rpoC2), and one nuclear (18S) genes from 162 seed plants, representing all major lineages of gymnosperms and angiosperms, were analyzed together in a supermatrix or in various partitions using likelihood and parsimony methods. The results show that Amborella + Nymphaeales together constitute the first diverging lineage of angiosperms, and that the topology of Amborella alone being sister to all other angiosperms likely represents a local long branch attrac- tion artifact. The monophyly of magnoliids, as well as sister relationships between Magnoliales and Laurales, and between Canellales and Piperales, are all strongly supported. The sister relationship to eudicots of Ceratophyllum is not strongly supported by this study; instead a placement of the genus with Chloranthaceae receives moderate support in the mitochondrial gene analyses. Relationships among magnoliids, monocots, and eudicots remain unresolved. Direct comparisons of analytic results from several data partitions with or without RNA editing sites show that in multigene analyses, RNA editing has no effect on well supported rela- tionships, but minor effect on weakly supported ones. Finally, comparisons of results from separate analyses of mitochondrial and chloroplast genes demonstrate that mitochondrial genes, with overall slower rates of sub- stitution than chloroplast genes, are informative phylogenetic markers, and are particularly suitable for resolv- ing deep relationships. -
Chimonanthus Praecox
Shang et al. Genome Biology (2020) 21:200 https://doi.org/10.1186/s13059-020-02088-y RESEARCH Open Access The chromosome-level wintersweet (Chimonanthus praecox) genome provides insights into floral scent biosynthesis and flowering in winter Junzhong Shang1†, Jingpu Tian1†, Huihui Cheng2†, Qiaomu Yan1, Lai Li1, Abbas Jamal1, Zhongping Xu3,4, Lin Xiang1, Christopher A. Saski5, Shuangxia Jin3,4* , Kaige Zhao1*, Xiuqun Liu1* and Longqing Chen6* * Correspondence: [email protected]. edu.cn; [email protected]; Abstract [email protected]; clqhzau@126. com Background: Wintersweet (Chimonanthus praecox), an important ornamental plant, †Junzhong Shang, Jingpu Tian and has evolved unique fragrant aroma and winter-flowering properties, which are critical Huihui Cheng contributed equally for its successful sexual reproduction. However, the molecular mechanisms underlying to this work. 3National Key Laboratory of Crop these traits are largely unknown in this species. In addition, wintersweet is also a typical Genetic Improvement, Huazhong representative species of the magnoliids, where the phylogenetic position of which Agricultural University, Wuhan, relative to eudicots and monocots has not been conclusively resolved. Hubei 430070, People’s Republic of China Results: Here, we present a chromosome-level wintersweet genome assembly with a 1Key Laboratory of Horticultural total size of 695.36 Mb and a draft genome assembly of Calycanthus chinensis. Plant Biology, Ministry of Education, Huazhong Agricultural University, Phylogenetic analyses of 17 representative angiosperm genomes suggest that Wuhan, Hubei 430070, People’s Magnoliids and eudicots are sister to monocots. Whole-genome duplication Republic of China signatures reveal two major duplication events in the evolutionary history of the 6Southwest Engineering Technology and Research Center of wintersweet genome, with an ancient one shared by Laurales, and a more recent Landscape Architecture, State one shared by the Calycantaceae. -
Annual Benefit Plant Sale 2012
Annual Benefit Plant Sale 2012 Botanic Gardens COLLEGE OF AGRICULTURE & NATURAL RESOURCES Connect to nature Get inspired by wildflowers, naturalistic gardening and meadows in a whole new way with our seasonal garden tours. Enjoy an art class in the garden or learn about native plant gardening, conservation, and habitats by taking one of our classes. And if you can’t visit us, enroll in our new online distance learning program, Mt. Cuba Center Connect. Visit www.mtcubacenter.org to reserve a tour or sign up for a class. Two-Hour Guided Tours | $5 per person Spring Wildflower Tours April 12th – May 27th Summer Twilight Tours May 30th – July 26th 8th Annual Wildflower Celebration |Free th April 29 , 10am – 4pm Purple pitcherplant (Sarracenia purpurea) Greenville, DE P: 302.239.4244 www.mtcubacenter.org INSPIRATION x EDUCATION x CONSERVATION 2 2012 SPRING PLANT SALE CATALOG WEBSITE: http://ag.udel.edu/udbg/events/annualsale.html WELCOME We welcome you to the twentieth annual UDBG benefit plant sale. In addition to its role as the major source of funding for the UDBG, 2012 BENEFIT PLANT SALE CATALOG we hope it also serves as a major educational event for our members and the public. It presents an opportunity to learn about new plants and consider possibilities. We should always look for ways to expand and improve our knowledge about plants and this catalog offers possibilities to accomplish both. As always, we offer an in- depth look at a particular group of plants, this year the genus Camellia. The selection goes beyond offering various cultivars with differing flower color, to a more extensive exploration of the genus with particular emphasis on hardy selections and new hybrids Camellia ‘Autumn Spirit’. -
And Intercontinental Biogeography of Calycanthaceae
Molecular Phylogenetics and Evolution 39 (2006) 1–15 www.elsevier.com/locate/ympev Molecular phylogeny and intra- and intercontinental biogeography of Calycanthaceae Shiliang Zhou a, Susanne S. Renner b, Jun Wen a,c,¤ a Laboratory of Systematic and Evolutionary Botany, Institute of Botany, The Chinese Academy of Sciences, Beijing 100093, China b Department of Biology, Ludwig Maximilians University, Menzinger Str. 67, D-80638 Munich, Germany c Department of Botany, Field Museum of Natural History, 1400 S. Lake Shore Dr., Chicago, IL 60605, USA Received 27 December 2004; revised 27 December 2005; accepted 9 January 2006 Available online 21 February 2006 Abstract Based on nuclear and chloroplast sequences we resolve species relationships in Calycanthaceae and develop a biogeographic hypothe- sis that explains their intercontinental disjunctions and intra-continental diversiWcation in eastern Asia. Fossil-calibrated penalized likeli- hood and Bayesian divergence time estimates indicate that the Northern Hemisphere Calycanthus and Chimonanthus diverged from each other in the mid-Miocene, while the Australian Idiospermum had already diverged by the Upper Cretaceous and likely represents a rem- nant of a former Gondwanan distribution of Calycanthaceae that included South America, as indicated by the occurrence of Cretaceous Calycanthaceae fossils in Brazil. Relationships within Calycanthus were diYcult to resolve, but a shared 155-bp deletion in the trnL–F intergenic spacer unites the two North American species, which were also sisters in a cpDNA restriction site study. Their ancestor appar- ently crossed the Bering land bridge in the Miocene. The six species of Chimonanthus, by contrast, diverged from each other as recently as 1–2 my ago, and a DIVA analysis with four areas of endemism recognized within China suggests three vicariance and two dispersal events within Chimonanthus, with initial vicariance having occurred between eastern and southwestern or central China. -
Evolutionary Directions of Single Nucleotide Substitutions And
Dong et al. BMC Evolutionary Biology (2020) 20:96 https://doi.org/10.1186/s12862-020-01661-0 RESEARCH ARTICLE Open Access Evolutionary directions of single nucleotide substitutions and structural mutations in the chloroplast genomes of the family Calycanthaceae Wenpan Dong1,2, Chao Xu1, Jun Wen1,3 and Shiliang Zhou1,4* Abstract Background: Chloroplast genome sequence data is very useful in studying/addressing the phylogeny of plants at various taxonomic ranks. However, there are no empirical observations on the patterns, directions, and mutation rates, which are the key topics in chloroplast genome evolution. In this study, we used Calycanthaceae as a model to investigate the evolutionary patterns, directions and rates of both nucleotide substitutions and structural mutations at different taxonomic ranks. Results: There were 2861 polymorphic nucleotide sites on the five chloroplast genomes, and 98% of polymorphic sites were biallelic. There was a single-nucleotide substitution bias in chloroplast genomes. A → TorT→ A(2.84%)and G → CorC→ G (3.65%) were found to occur significantly less frequently than the other four transversion mutation types. Synonymous mutations kept balanced pace with nonsynonymous mutations, whereas biased directions appeared between transition and transversion mutations and among transversion mutations. Of the structural mutations, indels and repeats had obvious directions, but microsatellites and inversions were non-directional. Structural mutations increased the single nucleotide mutations rates. The mutation rates per site per year were estimated to be 0.14–0.34 × 10− 9 for nucleotide substitution at different taxonomic ranks, 0.64 × 10− 11 for indels and 1.0 × 10− 11 for repeats. Conclusions: Our direct counts of chloroplast genome evolution events provide raw data for correctly modeling the evolution of sequence data for phylogenetic inferences. -
Calycanthus Chinensis: the Chinese Sweetshrub Jianhua Li ~ Peter Del Tredici
Calycanthus chinensis: The Chinese Sweetshrub jianhua Li ~ Peter Del Tredici chinensis is a ~ beautiful deciduous shrub alycanthuswith a narrow geographic distribution m Zhejiang Province, China. It grows up to ten feet tall with a broad profile. The leaves are oppositely arranged with short petioles and are glossy green with a touch of roughness on the upper surface. In the Boston area its nod- ding flowers appear in mid to late spring. Appearances notwithstand- ing, the sepals and petals are not differentiated (therefore termed tepals): the outer tepals are a silky white with a tinge of pink and a diameter of two to three inches, while the inner tepals are a waxy pale yellow to white with maroon markings. Unlike the native Caly- canthus floridus the flowers are not fragrant and are pollinated by small beetles. Tepals and stamens occupy the rim of a deep floral cup; the ovaries are attached to the side of the cup. The fruits, top-shaped with many seeds, overwinter on the shrub. In its natural habitat, it grows under- neath a canopy and therefore is best cultivated in partial shade with wind protection and good soil mois- ture. In 1998 Michael Dirr described it as "a unique plant but doubtfully " as worthy as Calycanthus floridus. as to the Opinions may vary species’ The pendant flowers of Calycanthus chinensis have an unusual, waxy texture. comparative garden worthiness, but where evolutionary and taxonomic histories are Calycanthus chinensis belongs to Calycan- concerned, C. chinensis definitely provokes more thaceae, which includes two genera and about interest. As a practical matter, the species is rare ten species.’ Chimonanthus (wintersweet) is in the wild and needs our help to survive. -
Calycanthus Floridus Carolina Allspice, Sweetshrub1
FPS95 Calycanthus floridus Carolina Allspice, Sweetshrub1 Edward F. Gilman2 Introduction General Information Sweetshrub could be used more as an ornamental in moist Scientific name: Calycanthus floridus locations (Fig. 1). The flowers are borne in midspring and Pronunciation: kal-lick-KANTH-us FLOR-rid-us have maroon to brown, strap-like petals and a fragrance Common name(s): sweetshrub, strawberry-bush, Carolina similar to that of strawberries. They are borne somewhat in- allspice side of the outer layer of foliage so they are often obscured Family: Calycanthaceae from view. They were used in years past to freshen the Plant type: shrub smell in the top several drawers of a set of dresser drawers. USDA hardiness zones: 5B through 10A (Fig. 2) Occasionally, they are used in potpourris. The leaves and Planting month for zone 7: year round fruits are aromatic when crushed. Several trunks form from Planting month for zone 8: year round the base of the plant and sprouts often grow from roots Planting month for zone 9: year round forming many trunks. Planting month for zone 10 and 11: year round Origin: native to Florida Uses: screen; espalier; specimen Availability: somewhat available, may have to go out of the region to find the plant Figure 2. Shaded area represents potential planting range. Figure 1. Sweetshrub 1. This document is FPS95, one of a series of the Environmental Horticulture, UF/IFAS Extension. Original publication date October 1999. Reviewed February 2014. Visit the EDIS website at http://edis.ifas.ufl.edu. 2. Edward F. Gilman, professor, Environmental Horticulture Department, UF/IFAS Extension, Gainesville, FL 32611. -
100 Years of Change in the Flora of the Carolinas
ASTERACEAE 224 Zinnia Linnaeus 1759 (Zinnia) A genus of about 17 species, herbs, of sw. North America south to South America. References: Smith in FNA (2006c); Cronquist (1980)=SE. 1 Achenes wingless; receptacular bracts (chaff) toothed or erose on the lip..............................................................Z. peruviana 1 Achenes winged; receptacular bracts (chaff) with a differentiated fimbriate lip........................................................Z. violacea * Zinnia peruviana (Linnaeus) Linnaeus, Zinnia. Cp (GA, NC, SC): disturbed areas; rare (commonly cultivated), introduced from the New World tropics. May-November. [= FNA, K, SE; ? Z. pauciflora Linnaeus – S] * Zinnia violacea Cavanilles, Garden Zinnia. Cp (GA, NC, SC): disturbed areas; rare (commonly cultivated), introduced from the New World tropics. May-November. [= FNA, K; ? Z. elegans Jacquin – S, SE] BALSAMINACEAE A. Richard 1822 (Touch-me-not Family) A family of 2 genera and 850-1000 species, primarily of the Old World tropics. References: Fischer in Kubitzki (2004). Impatiens Linnaeus (Jewelweed, Touch-me-not, Snapweed, Balsam) A genus of 850-1000 species, herbs and subshrubs, primarily tropical and north temperate Old World. References: Fischer in Kubitzki (2004). 1 Corolla purple, pink, or white; plants 3-6 (-8) dm tall; stems puberulent or glabrous; [cultivated alien, rarely escaped]. 2 Sepal spur strongly recurved; stems puberulent..............................................................................................I. balsamina 2 Sepal spur slightly -
Effect of Fertilizer Rates & Sources On
UNIVERSITI PUTRA MALAYSIA GROWTH AND NUTRITIONAL QUALITY OF Cosmos caudatus Kunth AS AFFECTED BY RATES OF ORGANIC AND INORGANIC FERTILIZERS AND POST HARVEST COOLING SALUMIAH BINTI MIJIN FP 2014 12 GROWTH AND NUTRITIONAL QUALITY OF Cosmos caudatus Kunth AS AFFECTED BY RATES OF ORGANIC AND INORGANIC FERTILIZERS AND POST HARVEST COOLING UPM SALUMIAH BINTI MIJIN COPYRIGHT MASTER OF SCIENCE © UNIVERSITI PUTRA MALAYSIA 2014 GROWTH AND NUTRITIONAL QUALITY OF Cosmos caudatus Kunth AS AFFECTED BY RATES OF ORGANIC AND INORGANIC FERTILIZERS AND POST HARVEST COOLING UPM By SALUMIAH BINTI MIJIN Thesis Submitted to the School of Graduate Studies, Universiti Putra Malaysia, in Fulfillment of the Requirements for the Degree of Master of COPYRIGHTScience March 2014 © All material contained within the thesis, including without limitation text, logos, icons, photographs and all other artwork, is copyright material of Universiti Putra Malaysia unless otherwise stated. Use may be made of any material contained within the thesis for non-commercial purposes from the copyright holder. Commercial use of material may only be made with the express, prior, written permission of Universiti Putra Malaysia. Copyright © Universiti Putra Malaysia UPM COPYRIGHT © DEDICATION This thesis is dedicated to my beloved husband and son, Abdul Sadar Abuda and Abdul Arieff Anaqiey, who tought me to hope, believe and have faith UPM COPYRIGHT © Abstract of thesis presented to the Senate of Universiti Putra Malaysia in fulfillment of the requirement for the degree of Master of Science GROWTH AND NUTRITIONAL QUALITY OF Cosmos caudatus Kunth AS AFFECTED BY RATES OF ORGANIC AND INORGANIC FERTILIZERS AND POST HARVEST COOLING By SALUMIAH BINTI MIJIN March 2014 Chairman: Associate Professor Siti Aishah Hassan, PhD Faculty: Agriculture UPM A study was conducted to determine the effects of fertilizer sources and rates on growth, physiology and phytonutritional quality of Cosmos caudatus, a herbal species that is normally consumed fresh as a salad. -
Calycanthus Floridus L. PLANT CHARACTERISTICS BLOOM
Calycanthus floridus L. Eastern sweetshrub, Carolina allspice, Sweet shrub Calycanthaceae (Sweetshrub Family) USDA Symbol: CAFL22 USDA Native Status: Native to U.S. Eastern sweetshrub or Carolina allspice is a 6-12 ft., deciduous shrub with glossy, aromatic, leathery, dark-green foliage. Its with erect, multiple stems create a rounded outline. Terminal blossoms are solitary and dark red with numerous overlapping, strap-like petals. Flower are often quite fragrant. Leaves become yellow in fall but are usually not showy. Calycanthus floridus is very resistant to disease and insect problems. It has a prolific suckering habit, adapts to many soils, and grows taller in shaded places. PLANT CHARACTERISTICS Duration: Perennial Habit: Shrub Leaf Retention: Deciduous Leaf Arrangement: Opposite Leaf Complexity: Simple Fruit: Size Class: 6-12 ft. BLOOM INFORMATION Bloom Color: Red Bloom Time: Apr , May , Jun , Jul DISTRIBUTION USA: AL , CT , DC , DE , FL , GA , IL , KY , LA , MA , MD , MS , NC , NY , OH , PA , SC , TN , VA , WV Native Distribution: S.e. PA to s.e. KY, generally s. to FL Panhandle & LA Native Habitat: Wood openings & edges; stream banks; moist hillsides USDA Native Status: L48(N) GROWING CONDITIONS Light Requirement: Part Shade Soil Moisture: Moist Soil Description: Moist, deep loams. Conditions Comments: Calycanthus floridus is very resistant to disease and insect problems. It has a prolific suckering habit, adapts to many soils and grows taller in shaded places. Transplanting nursery stock is tricky. Pamper after planting until new growth starts. PROPAGATION Description: Propagate by seed, but watch for slugs on recently germinated plants. Great clonal variation exists in rootability but semi-hardwood cuttings from the right plant will root. -
Hydraulic Conductance and the Maintenance of Water Balance in Flowers
Plant, Cell and Environment (2016) 39,2123–2132 doi: 10.1111/pce.12761 Original Article Hydraulic conductance and the maintenance of water balance in flowers Adam B. Roddy1,2, Craig R. Brodersen2 & Todd E. Dawson1 1Department of Integrative Biology, University of California, Berkeley, CA 94720, USA and 2School of Forestry & Environmental Studies, Yale University, New Haven, CT 06511, USA ABSTRACT been relatively ignored, even though non-pollinator agents of selection, such as physiological costs, often oppose the effects Flowers face desiccating conditions, yet little is known about of pollinators (Galen 1999; Galen et al. 1999; Lambrecht their ability to transport water. We quantified variability in 2013; Strauss and Whittall 2006). floral hydraulic conductance (Kfl )for20speciesfrom10 ower Like leaves, flowers are terminal structures often located in families and related it to traits hypothesized to be associated the hottest, driest parts of the plant canopy, but flowers and with liquid and vapour phase water transport. Basal angio- leaves have experienced different selective forces. Leaves are sperm flowers had trait values associated with higher water a critical component in the plant hydraulic pathway and have and carbon costs than monocot and eudicot flowers. Kfl ower alargeinfluence on the terrestrial water cycle (Hetherington was coordinated with water supply (vein length per area, and Woodward 2003). Because carbon assimilation is mecha- VLA) and loss (minimum epidermal conductance, g ) traits min nistically linked to plant transpiration (Brodribb and Feild among the magnoliids, but was insensitive to variation in these 2000; Brodribb et al. 2007; Sack and Holbrook 2006), moving traits among the monocots and eudicots. Phylogenetic inde- water from the roots to the leaves requires coordination in pendent contrast (PIC) correlations revealed that few traits the structural traits governing water flow through each compo- had undergone coordinated evolution. -
Woody Plants
For questions about local plants, call: Natural Resources Coordinator 980-314-1119 www.parkandrec.com WOODY PLANT CHECKLIST Mecklenburg County, NC: 301 species Moschatel Family ☐ Chinese Holly, Burford Holly* ☐ Beaked Hazelnut ☐ Common Elderberry (Ilex cornuta) (Corylus cornuta var. cornuta) (Sambucus canadensis) ☐ Japanese Holly* (Ilex crenata) ☐ American Hop-hornbeam, Ironwood ☐ Maple-leaf Viburnum, Dockmackie ☐ Possum-haw (Ilex decidua var. decidua) (Ostrya virginiana) (Viburnum acerifolium) ☐ Georgia Holly, Chapman’s Holly Bignonia Family ☐ Arrow-wood (Viburnum dentatum) (Ilex longipes) ☐ Cross-vine (Bignonia capreolata) ☐ Southern Wild Raisin, Possumhaw ☐ Mountain Holly (Ilex montana) ☐ Trumpet-creeper (Campsis radicans) (Viburnum nudum) ☐ American Holly, Christmas Holly ☐ Northern Catalpa~ (Catalpa speciosa) ☐ Black Haw (Viburnum prunifolium) (Ilex opaca var. opaca) ☐ Southern Black Haw ☐ Winterberry (Ilex verticillata) Boxwood Family (Viburnum rufidulum) ☐ Yaupon~ (Ilex vomitoria) ☐ Boxwood* (Buxus sempervirens) Agave Family Ginseng Family ☐ Pachysandra, Japanese-spurge* (Pachysandra terminalis) ☐ Rattlesnake-master, Eastern False-aloe ☐ Devil’s-walking-stick, Hercules’s-club (Manfreda virginica) (Aralia spinosa) Cactus Family ☐ Curlyleaf Yucca, Spoonleaf Yucca ☐ Common Ivy, English Ivy* ☐ Prickly-pear (Yucca filamentosa) (Hedera helix var. helix) (Opuntia humifusa var. humifusa) ☐ Weakleaf Yucca (Yucca flaccida) ☐ Ginseng (Panax quinquefolius) Sweet-shrub Family ☐ Mound-lily Yucca~ (Yucca gloriosa) Aster Family ☐ Sweet-shrub,