bioRxiv preprint doi: https://doi.org/10.1101/2020.03.07.982223; this version posted March 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license.
1 Distribution and habitat of Australian Pied Oystercatchers Haematopus longirostris 2 along the SE Australian coast
3 Stephen Totterman
4 Empire Vale, NSW, 2478, Australia
5 SUMMARY
6 Australian Pied Oystercatchers Haematopus longirostris and their habitat were surveyed on 7 72 beaches and 674 km of the SE Australian Coast, from Fraser Island, Queensland to near 8 the New South Wales–Victoria state border and between 2015–2018. A grand total of 41 9 oystercatcher territories and 232 individual birds (the sum of mean beach counts) were 10 counted. Bird-habitat models for oystercatcher mean count density indicated a positive 11 response to the abundance of the primary prey species Donax deltoides, a large ‘surf clam’ 12 and commonly known as the ‘pipi’, a negative response to the proportion of beach length 13 urban and a negative S-N trend. Models for oystercatcher territory density indicated a 14 positive response to pipi abundance and a negative response to pedestrian access density. 15 This report upgrades the coastal development, tourism and human recreation disturbance 16 threats for the species and calls for the long term protection of beach-nesting bird habitat.
17 Keywords: beach nesting bird; bird-habitat model; coastal development; Donax deltoides; 18 human recreation disturbance; sandy ocean beach; species distribution model; surf clam
19 INTRODUCTION
20 The Australian Pied Oystercatcher Haematopus longirostris inhabits estuaries and ocean 21 beaches around the Australian coast, with major populations in the southern states of 22 Tasmania, South Australia and Victoria (reviewed in Taylor et al. 2014). The species is non- 23 migratory and many breeding pairs remain on their territories throughout the year. Like other 24 oystercatcher species, the density of Australian Pied Oystercatcher breeding pairs is usually 25 limited by territorial behaviour. The ecology of oystercatchers on ocean beaches is not well 26 known.
27 Microtidal, high energy ocean beaches (surf beaches) are common along the SE Australian 28 coast (Short 2007). These are narrow, essentially linear habitats with a narrow intertidal zone. 29 Australian Pied Oystercatchers typically nest on the low fore dune (Wellman et al. 2000). 30 Beach width and length spatial constraints and territorial behaviour mean that beach-resident 31 oystercatcher populations are smaller than those counted in large estuaries (see Taylor et al. 32 2014) and are dispersed along the coast.
33 Spatial constraints amplify human recreation disturbance for shorebirds on ocean beaches. 34 Totterman (2019a) measured mean beach widths in the range 31–84 m (from the base of the 35 fore dune to the middle of the low tide swash zone) for 11 beaches on the Far North Coast of 36 the state of New South Wales (NSW). These beach widths are similar to reported flight 37 initiation distances for Australian Pied Oystercatchers of 39–83 m for a human stimulus 38 (reviewed in Weston et al. 2012) or 129 m for a human and dog stimulus (Harrison 2009).
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bioRxiv preprint doi: https://doi.org/10.1101/2020.03.07.982223; this version posted March 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license.
39 People also disperse from beach access points in the along shore direction. Totterman (2019c) 40 reported that beach walking, commonly with dogs, is the most frequent beach recreation 41 activity on the Far North Coast of NSW and the 444 m mean distance walked along shore is 42 one order of magnitude greater than mean flight initiation distances for Australian Pied 43 Oystercatchers.
44 Commonly known as the ‘pipi’, Donax deltoides is a large ‘surf clam’ that inhabits the 45 intertidal and shallow subtidal zones on ocean beaches from Fraser Island, in the state of 46 Queensland, to the Murray River, South Australia (Ferguson et al. 2018). Pipis are the major 47 prey for Australian Pied Oystercatchers on ocean beaches in NSW (Owner & Rohweder 48 1997, Harrison 2009, Totterman 2018). Owner & Rohweder (2003) reported that 49 oystercatchers aggregated at beaches with high pipi biomass (high mean pipi count density 50 and large mean pipi length). Totterman (2018) also reported oystercatcher-pipi abundance 51 correlations, however those results refer to a dynamic period of recovery of pipi stocks on a 52 single beach.
53 Pipis are also exploited by humans for food and as bait for recreational fishing. Owner & 54 Rohweder (2003) and Harrison (2009) raised concerns about the potential negative impacts of 55 commercial fishing on pipi stocks and oystercatcher populations. However, surf clams are 56 fast-growing and short-lived, and weak or zero pipi recruitment can also result in pipi stock 57 declines (Murray-Jones 1999). Management responses to the recent 2003–2009 ‘pipi crash’ 58 (Totterman 2018) that were introduced for the NSW commercial fishery in 2012 are: an 59 annual Dec–Jun temporal closure; spatial closures for certain beaches and zones within 60 certain beaches; a daily trip limit of 40 kg per fisher and a minimum size limit of 45 mm 61 (Gray 2016a; Ferguson et al. 2018). Only hand gathering of pipis is allowed in NSW. The 62 NSW commercial fishery is small, with 52 licenses in 2018 (not all of which were necessarily 63 active) and a FY 2015–16 catch of 176 t (Ferguson et al. 2018). There is no commercial pipi 64 fishing in Queensland.
65 Surf clams burrow themselves into the sand and are also mobile, at times emerging and 66 ‘riding’ the wash up and down the beach face (Ellers 1995). This mobility and varying beach 67 and surf conditions results in surf clam aggregations that vary across small and large spatial 68 and temporal scales including tidal migrations, seasonal and other rhythmic patterns (e.g. 69 Totterman 2019a). Patchy and variable pipi abundance could explain the rather long 70 territories for oystercatchers on ocean beaches. The historical maximum density for South 71 Ballina Beach, which formerly supported the largest beach resident oystercatcher population 72 in NSW, is 18 breeding pairs over 18.7 km of available habitat in 2000 (NSW Department of 73 Planning, Industry and Environment (DPIE), unpubl. data), which equals 1.04 km/pair, 74 although territory lengths are not uniform.
75 Surf clams feed on suspended organic matter in the swash zone by extending their siphons to 76 the sand-water interface. Oystercatchers can locate buried pipis by visual searching for pipi 77 siphons or by tactile searching, probing the sand with their bills (Totterman 2018). 78 Oystercatchers who have located a pipi have little time to make careful prey size assessments 79 and act before the next wave arrives. Accordingly, and unlike many studies for the Eurasian
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bioRxiv preprint doi: https://doi.org/10.1101/2020.03.07.982223; this version posted March 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license.
80 Oystercatcher Haematopus ostralegus, size selection has not been reported for oystercatchers 81 taking surf clams (Owner 1997, Taylor and Taylor 2005, Totterman 2018). Totterman (2018) 82 further suggested no prey size selection among different prey types and noted that small prey 83 also have small biomass and can reasonably be ignored in studies where large clams are 84 frequently taken. The asymptotic oystercatcher feeding rate estimate in Totterman (2018) was 85 0.26 pipis per min of active foraging time. Like many other shorebird functional responses 86 reviewed in Goss-Custard et al. (2006), this asymptote was reached at a low prey density of 87 c. 5 pipis/m2.
88 The Australian Pied Oystercatcher is currently listed as Endangered in NSW (NSW DPIE 89 2019a). For the entire global population, conservation threats recognised by Taylor et al. 90 (2014) were human recreation disturbance, habitat loss, predators, clam harvesting, kelp 91 harvesting (which is not relevant for more northerly temperate and sub-tropical beaches, 92 where beach-washed kelp is scarce) and global climate change. BirdLife Australia have 93 stated that the greatest conservation threat to beach nesting birds is disturbance from people 94 visiting the beach (Birdlife Australia 2018).
95 Johnson (2002) advocated for replication of studies (‘metareplication’) to have confidence in 96 the generality of findings. This study was motivated by concerns that Owner & Rohweder 97 (2003) missed the coastal development and human recreation disturbance threats for 98 oystercatchers on ocean beaches and overstated the importance of pipis. The objective was to 99 sample a larger number of beaches and re-examine oystercatcher-habitat associations for the 100 SE Australian coast.
101 STUDY AREA AND METHODS
102 Sampling design
103 For estimating species-habitat models it is essential to include in the sample sites where the 104 species is more abundant (Albert et al. 2010). A simple random sample of beaches would 105 have resulted in many zero oystercatcher counts and little information for modelling 106 abundance. This study purposely selected beaches where pipis and oystercatchers were 107 expected to be more abundant.
108 The sampling space for this study extends from the Fraser Island, Queensland S to the NSW– 109 Victoria border (Fig. 1). There are few and short beaches around the NSW–Victoria border. 110 Based on the results of Owner (1997), 117 exposed beaches with a SE to E aspect and > 1.5 111 km long, where pipis could be relatively abundant, were identified for the sampling frame. 112 Beaches were defined by natural breaks (e.g. headlands and rivers). Some short beaches were 113 combined if the break did not present a substantial barrier, e.g. a short, low rocky interval that 114 could easily be traversed at all tides. Together with the results of Harrison (2009), sampling 115 prioritised longer, less-developed beaches, where oystercatchers could be relatively abundant. 116 Identification of high pipi abundance and high oystercatcher abundance beaches was also 117 guided by information from other studies and reports (Gray 2016a,b, Totterman 2019b, NSW 118 DPIE 2019b).
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119 The oystercatcher breeding season on the Far North Coast of NSW is Aug–Dec and late 120 attempts generally are replacement clutches (Wellman et al. 2000). Sampling occurred early 121 in the breeding season (Jul–Oct) when competition for territories and territory occupancy was 122 assumed to be maximum. Sampling started with beaches in the N of the sampling space, 123 progressed down the coast and usually included some more beaches on the return trip N. 124 Sampling in any one season selected non-adjacent beaches to reduce spatial autocorrelation 125 that could result from short-distance movements of birds.
126 Counts
127 Beaches were surveyed with a handheld Global Positioning System (GPS) satellite receiver, 128 marking 4–13 (mode 7) regularly spaced along shore waypoints at the high tide drift line to 129 measure beach length and along shore distances for pipi sampling locations and oystercatcher 130 territory mapping.
131 Oystercatchers were usually counted at low tide. A four-wheel-drive (4WD) vehicle was used 132 on longer beaches, where permitted. Otherwise, and for shorter beaches, a bicycle was used. 133 Some of the shortest beaches, and those with a steep face and soft sand, were walked.
134 Oystercatchers present in any estuaries, lakes or on sand spits adjacent to a beach were noted 135 but not added to the beach count. Coastal lakes are common along the NSW South Coast, 136 many of these are inhabited by oystercatchers and these birds can be found roosting and 137 sometimes nesting adjacent to the beach. However, these birds forage and spend most of the 138 time in the estuary or lake and are rarely seen on the intertidal zone of the beach. This study 139 strictly counted oystercatchers on beaches and ‘beach residents’.
140 ‘Adult’-plumage oystercatchers were counted including second immature plumage attained at 141 c. one year old, which looks the same without close inspection. One and two year old 142 oystercatchers have relatively dull colours of bill, legs and iris compared to adults (Marchant 143 and Higgins 1993), but not all individuals could be inspected closely (e.g. birds at distance, in 144 unfavourable light or flying past). Birds marked with bands or alphanumeric leg flags were 145 noted to assist in the identification of local residents.
146 Territory mapping (spot mapping) was applied and each beach was counted a minimum of 147 three times on non-consecutive days. Beaches with higher oystercatcher densities (birds/km) 148 also tend to have higher territory densities and warrant extra counts. Territory mapping effort 149 was increased to a minimum of five counts for beaches with > 0.5 birds/km, based on 150 breeding season densities for oystercatcher breeding beaches on the Far North Coast of NSW 151 of 0.3–1.9 adults/km in Owner & Rohweder (2003) and 0.5–1.9 adults/km in Harrison 152 (2009). Supplementary counts were also made opportunistically for some beaches where pipi 153 sampling continued beyond the oystercatcher counting period. Three to five counts was 154 considered sufficient for a low-cost estimate of territories because oystercatchers on the 155 beach are conspicuous and easy to find, territories are one-dimensional and the observer was 156 experienced with spot-mapping oystercatcher territories on beaches (Totterman 2018).
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157 Oystercatcher territories were identified as adult ‘pairs’ that were present on the same stretch 158 of beach on at least two of three or three of five counts. These territory estimates are short- 159 term results using standardised methods and not all pairs that occupy a stretch of beach may 160 go on to breed. Counts of breeding pairs are costly, requiring frequent visits throughout the 161 breeding season. Territories are compared with independent counts of breeding pairs in the 162 Results.
163 Pipi abundance
164 A new ‘feet digging’ method (Totterman 2019b) was used to efficiently sample pipis and 165 enable precise beach-scale estimates of pipi abundance and mean pipi length. The method 166 was developed from a recreational fishing technique that involves twisting one’s feet into the 167 thixotropic sand to dislodge buried clams which are then recovered by hand. Several plots are 168 sampled across the swash zone in one five-min sampling unit and the process is replicated at 169 several locations along the beach. Totterman (2019b) reported that mean feet digging pipi 170 counts were proportional to mean transect linear pipi densities (r = 0.98) and that pipi length- 171 frequency distributions from feet digging agreed with those from quadrat sampling except 172 that feet digging was not effective for pipis < 16 mm. New pipi recruits are not always 173 present and can be ignored because biomass increases exponentially with shell length 174 (Murray-Jones 1999) and larger clams contribute more to oystercatcher diets (Totterman 175 2018).
176 Variance increases strongly with the mean pipi count (Totterman 2019b). A constant 177 precision stopping rule was applied for pipi sampling: stop sampling when SE ≤ 2 pipis/5 178 min. This stopping rule efficiently allocates effort to prevent oversampling of low pipi 179 abundance beaches and undersampling of high abundance beaches. A first pass sampled pipis 180 at 20 along shore locations, regularly spaced along a beach from a random starting distance 181 and cycling through the tidal stages high, ebb, low and flow (i.e. with five locations sampled 182 for each tide stage). If SE > 2 pipis/5 min, then further sampling passes, consisting of 183 multiples of 20 along shore locations, were performed until the SE stopping rule was satisfied 184 or a maximum sample size of 100 was reached. For three long, high pipi abundance beaches 185 (Teewah, Bennetts and Stockton), the beach could be divided into low and high pipi 186 abundance strata based on the first pass(es) and informal observations. Stratified sampling 187 was then applied to more efficiently approach the SE stopping rule.
188 Pipi lengths were measured with a calliper to the nearest mm (maximum shell length). All 189 pipis were measured in the first sampling pass of 20 locations. If pipi abundance was low and 190 only one pass and 20 locations were sampled then mean pipi length was based on < 100 191 measurements. Otherwise, and if < 100 pipis were sampled in the first pass, pipis were also 192 measured for each subsequent pass until at least 100 pipis were measured. After that, pipis 193 were only counted because measuring large numbers of pipis is time consuming and a sample 194 size of 100 gives a precise mean pipi length.
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195 Human recreation and other habitat variables
196 Counts of people, dogs, 4WDs, motorcycles, bicycles, horses and, on Fraser Island, aircraft 197 directly measure human recreation activity and were counted simultaneous with oystercatcher 198 counts. Dogs included dingos (naturalised dogs) that were present in low densities on Fraser 199 Island and in the Myall Lakes region, NSW. Counts of humans and dogs excluded those in 200 4WDs and in the surf. Motorcycle, bicycle, horse and aircraft counts were small, with grand 201 totals of 3, 32, 42 and 4 respectively, and are not considered further.
202 Coastal development variables and indirect measures of human recreation that were recorded 203 were: urban length, length of public beach driving zones, whether or not beach driving 204 permits were required, length of dog exercise zones, length of beach adjoining any terrestrial 205 protected areas (National Parks and Nature Reserves), counts of pedestrian and (where 4WDs 206 were permitted) 4WD beach access tracks and counts of beach front and near beach camping 207 grounds and caravan parks. Access tracks include public and private, formal and informal 208 tracks. Tracks had to be frequently used and lead somewhere to be counted (e.g. temporary 209 dune driving tracks were not counted). 4WD tracks were also used by pedestrians on many 210 beaches but were not added to that count. Permits are not applicable for the majority of 211 beaches sampled (i.e. where driving is not permitted) and this variable is not considered 212 further.
213 Human population density was obtained from the 1 × 1 km resolution Australian Population 214 Grid 2011 (Australian Bureau of Statistics 2011). The intersection of a line defined by GPS 215 survey waypoints with the Australian Population Grid 2011 identifies beach front grid cells 216 and the sum of these cells equals the beach front human population.
217 Beach morphodynamic state (Short 2007) was observed during average surf conditions (i.e. 218 not during erosive periods associated with storms and large swells) and one handful of 219 intertidal sand was sampled at each GPS waypoint. Sand grain size was classified on the 220 Wentworth scale by visual comparison to graded samples on a sand gauge. Any shell 221 fragments present were ignored. Beach morphodynamic state and sand grain size within 222 beaches were summarised as modal values.
223 Statistical analysis
224 Counts, zone lengths and human population are ‘extensive variables’ and scale with beach 225 length. Extensive variables were converted to linear densities (e.g. birds/km) and proportions 226 (e.g. urban proportion) by dividing by beach lengths (Owner & Rohweder 2003). ‘Intensive 227 variables’, e.g. mean pipi abundance and mean pipi length, do not scale with beach length.
228 There were two response variables in the dataset: oystercatcher mean total count/density and 229 oystercatcher territory count/density. The dataset included 23 predictor variables (Table 2), 230 several of which were less informative than or correlated with other predictors. Multiple 231 regression cannot identify which predictors are associated with the response when there is 232 collinearity (Graham 2003). Data exploration was the major part of the statistical analysis, 233 with the goal to detect patterns in the data and simplify and reduce collinearity in the dataset
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bioRxiv preprint doi: https://doi.org/10.1101/2020.03.07.982223; this version posted March 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license.
234 (Zuur et al. 2010). This involved three steps: 1) spatial patterns (bubble maps, correlograms); 235 2) bivariate associations and interactions between predictors (scatter plots, box-and-whisker 236 plots), and; 3) collinearity (for continuous predictors).
237 A simple method for visualising collinearity among continuous predictor variables is a cluster 238 analysis using correlation coefficients. Clusters were identified by cutting the dendrogram at 239 Spearman r2 = 0.49 (equivalent to |r| < 0.7). Collinear variables within an identified cluster 240 were combined if this could be done using simple arithmetic (e.g. the sum of two collinear 241 count variables) else the variable with the strongest correlation with the response variable 242 was selected (Dormann et al. 2013).
243 Multiple regression was used for modelling oystercatcher counts because this method allows 244 for simple and interpretable inference and the sample size was unbalanced and effectively 245 small, with high oystercatcher densities on only a few beaches. Repeated-measures ‘mixed- 246 models’ were not necessary because replicate oystercatcher counts from each beach were 247 fairly precise, the number of replicate counts was as small as three and estimating the 248 variance among these repeated counts was of no interest (Murtaugh 2007).
249 Generalised linear models (GLMs) with a log link were fitted to integer oystercatcher mean 250 counts (rounded to zero decimal places) and oystercatcher territory counts. The negative 251 binomial error distribution was assumed when there was over dispersion in Poisson model 252 residuals. Beach length was included as an offset term was included in GLMs to effectively 253 model density, where: log
254 is equivalent to:
log 1 log
255 and the fixed coefficient of one for log(length) indicates that it is an offset.
256 With a log link, the GLM is a multiplicative model: